{"id":"https://openalex.org/W2018975235","doi":"https://doi.org/10.1007/s10489-009-0189-4","title":"AlineaGA\u2014a genetic algorithm with local search optimization for\u00a0multiple sequence alignment","display_name":"AlineaGA\u2014a genetic algorithm with local search optimization for\u00a0multiple sequence alignment","publication_year":2009,"publication_date":"2009-06-29","ids":{"openalex":"https://openalex.org/W2018975235","doi":"https://doi.org/10.1007/s10489-009-0189-4","mag":"2018975235"},"language":"en","primary_location":{"id":"doi:10.1007/s10489-009-0189-4","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s10489-009-0189-4","pdf_url":null,"source":{"id":"https://openalex.org/S74726891","display_name":"Applied Intelligence","issn_l":"0924-669X","issn":["0924-669X","1573-7497"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Applied Intelligence","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100363369","display_name":"Fernando Silva","orcid":"https://orcid.org/0000-0001-9335-1851"},"institutions":[{"id":"https://openalex.org/I169427155","display_name":"Instituto Polit\u00e9cnico de Leiria","ror":"https://ror.org/010dvvh94","country_code":"PT","type":"education","lineage":["https://openalex.org/I169427155"]}],"countries":["PT"],"is_corresponding":true,"raw_author_name":"Fernando Jos\u00e9 Mateus da Silva","raw_affiliation_strings":["Dept. of Informatics Engineering, School of Technology and Management, Polytechnic Institute of Leiria, Leiria, Portugal"],"affiliations":[{"raw_affiliation_string":"Dept. of Informatics Engineering, School of Technology and Management, Polytechnic Institute of Leiria, Leiria, Portugal","institution_ids":["https://openalex.org/I169427155"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103914893","display_name":"Juan Manuel S\u00e1nchez P\u00e9rez","orcid":"https://orcid.org/0000-0001-5054-3204"},"institutions":[{"id":"https://openalex.org/I80606768","display_name":"Universidad de Extremadura","ror":"https://ror.org/0174shg90","country_code":"ES","type":"education","lineage":["https://openalex.org/I80606768"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Juan Manuel S\u00e1nchez\u00a0P\u00e9rez","raw_affiliation_strings":["Dept. Tecnolog\u00edas Computadores y Comunicaciones, Escuela Polit\u00e9cnica, Universidad de Extremadura, C\u00e1ceres, Spain"],"affiliations":[{"raw_affiliation_string":"Dept. Tecnolog\u00edas Computadores y Comunicaciones, Escuela Polit\u00e9cnica, Universidad de Extremadura, C\u00e1ceres, Spain","institution_ids":["https://openalex.org/I80606768"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5059757284","display_name":"Juan A. G\u00f3mez\u2010Pulido","orcid":"https://orcid.org/0000-0002-0441-9402"},"institutions":[{"id":"https://openalex.org/I80606768","display_name":"Universidad de Extremadura","ror":"https://ror.org/0174shg90","country_code":"ES","type":"education","lineage":["https://openalex.org/I80606768"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Juan Antonio G\u00f3mez\u00a0Pulido","raw_affiliation_strings":["Dept. Tecnolog\u00edas Computadores y Comunicaciones, Escuela Polit\u00e9cnica, Universidad de Extremadura, C\u00e1ceres, Spain"],"affiliations":[{"raw_affiliation_string":"Dept. Tecnolog\u00edas Computadores y Comunicaciones, Escuela Polit\u00e9cnica, Universidad de Extremadura, C\u00e1ceres, Spain","institution_ids":["https://openalex.org/I80606768"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5049408851","display_name":"Miguel A. Vega\u2010Rodr\u00edguez","orcid":"https://orcid.org/0000-0002-3003-758X"},"institutions":[{"id":"https://openalex.org/I80606768","display_name":"Universidad de Extremadura","ror":"https://ror.org/0174shg90","country_code":"ES","type":"education","lineage":["https://openalex.org/I80606768"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Miguel A. Vega\u00a0Rodr\u00edguez","raw_affiliation_strings":["Dept. Tecnolog\u00edas Computadores y Comunicaciones, Escuela Polit\u00e9cnica, Universidad de Extremadura, C\u00e1ceres, Spain"],"affiliations":[{"raw_affiliation_string":"Dept. Tecnolog\u00edas Computadores y Comunicaciones, Escuela Polit\u00e9cnica, Universidad de Extremadura, C\u00e1ceres, Spain","institution_ids":["https://openalex.org/I80606768"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5100363369"],"corresponding_institution_ids":["https://openalex.org/I169427155"],"apc_list":{"value":2390,"currency":"EUR","value_usd":2990},"apc_paid":null,"fwci":0.9393,"has_fulltext":false,"cited_by_count":32,"citation_normalized_percentile":{"value":0.73544671,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"32","issue":"2","first_page":"164","last_page":"172"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9983999729156494,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9983999729156494,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9966999888420105,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10602","display_name":"Glycosylation and Glycoproteins Research","score":0.9886000156402588,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7447709441184998},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.645694375038147},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.6073727607727051},{"id":"https://openalex.org/keywords/local-search","display_name":"Local search (optimization)","score":0.5950006246566772},{"id":"https://openalex.org/keywords/genetic-algorithm","display_name":"Genetic algorithm","score":0.5761824250221252},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.5251250863075256},{"id":"https://openalex.org/keywords/alignment-free-sequence-analysis","display_name":"Alignment-free sequence analysis","score":0.5183740258216858},{"id":"https://openalex.org/keywords/multiple-sequence-alignment","display_name":"Multiple sequence alignment","score":0.5070726871490479},{"id":"https://openalex.org/keywords/sequence-alignment","display_name":"Sequence alignment","score":0.4981577396392822},{"id":"https://openalex.org/keywords/search-algorithm","display_name":"Search algorithm","score":0.44798851013183594},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.19695907831192017},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.1506844162940979},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.10824158787727356},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.08987286686897278},{"id":"https://openalex.org/keywords/peptide-sequence","display_name":"Peptide sequence","score":0.07976961135864258}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7447709441184998},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.645694375038147},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.6073727607727051},{"id":"https://openalex.org/C135320971","wikidata":"https://www.wikidata.org/wiki/Q1868524","display_name":"Local search (optimization)","level":2,"score":0.5950006246566772},{"id":"https://openalex.org/C8880873","wikidata":"https://www.wikidata.org/wiki/Q187787","display_name":"Genetic algorithm","level":2,"score":0.5761824250221252},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.5251250863075256},{"id":"https://openalex.org/C180384323","wikidata":"https://www.wikidata.org/wiki/Q16335137","display_name":"Alignment-free sequence analysis","level":5,"score":0.5183740258216858},{"id":"https://openalex.org/C88031987","wikidata":"https://www.wikidata.org/wiki/Q1377767","display_name":"Multiple sequence alignment","level":5,"score":0.5070726871490479},{"id":"https://openalex.org/C45484198","wikidata":"https://www.wikidata.org/wiki/Q827246","display_name":"Sequence alignment","level":4,"score":0.4981577396392822},{"id":"https://openalex.org/C125583679","wikidata":"https://www.wikidata.org/wiki/Q755673","display_name":"Search algorithm","level":2,"score":0.44798851013183594},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.19695907831192017},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.1506844162940979},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.10824158787727356},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.08987286686897278},{"id":"https://openalex.org/C167625842","wikidata":"https://www.wikidata.org/wiki/Q899763","display_name":"Peptide sequence","level":3,"score":0.07976961135864258},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/s10489-009-0189-4","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s10489-009-0189-4","pdf_url":null,"source":{"id":"https://openalex.org/S74726891","display_name":"Applied Intelligence","issn_l":"0924-669X","issn":["0924-669X","1573-7497"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Applied Intelligence","raw_type":"journal-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":40,"referenced_works":["https://openalex.org/W25941918","https://openalex.org/W66010334","https://openalex.org/W155968654","https://openalex.org/W196217920","https://openalex.org/W1484713061","https://openalex.org/W1497256448","https://openalex.org/W1573357580","https://openalex.org/W1639032689","https://openalex.org/W1752746544","https://openalex.org/W1851749474","https://openalex.org/W1966108277","https://openalex.org/W1991319607","https://openalex.org/W2010638919","https://openalex.org/W2031585873","https://openalex.org/W2076724084","https://openalex.org/W2083384411","https://openalex.org/W2102626325","https://openalex.org/W2102941368","https://openalex.org/W2103138948","https://openalex.org/W2116582006","https://openalex.org/W2142183404","https://openalex.org/W2144362290","https://openalex.org/W2146338925","https://openalex.org/W2151163048","https://openalex.org/W2154846630","https://openalex.org/W2160103208","https://openalex.org/W2161062388","https://openalex.org/W2166325055","https://openalex.org/W2518365615","https://openalex.org/W2530938137","https://openalex.org/W2561675875","https://openalex.org/W2601913882","https://openalex.org/W3004042307","https://openalex.org/W3023540311","https://openalex.org/W4206218861","https://openalex.org/W4211054902","https://openalex.org/W4285719527","https://openalex.org/W4301173492","https://openalex.org/W4301626968","https://openalex.org/W6735657100"],"related_works":["https://openalex.org/W2051969447","https://openalex.org/W2133116680","https://openalex.org/W2111937814","https://openalex.org/W2141411672","https://openalex.org/W2091678889","https://openalex.org/W1482324242","https://openalex.org/W187239587","https://openalex.org/W2730968108","https://openalex.org/W4386770652","https://openalex.org/W2158700816"],"abstract_inverted_index":null,"counts_by_year":[{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":1},{"year":2020,"cited_by_count":2},{"year":2019,"cited_by_count":2},{"year":2018,"cited_by_count":2},{"year":2017,"cited_by_count":3},{"year":2016,"cited_by_count":3},{"year":2015,"cited_by_count":1},{"year":2014,"cited_by_count":3},{"year":2013,"cited_by_count":7},{"year":2012,"cited_by_count":4}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
