{"id":"https://openalex.org/W4206055694","doi":"https://doi.org/10.1007/s10479-022-04527-4","title":"Incorporation of gene ontology in identification of protein interactions from biomedical corpus: a multi-modal approach","display_name":"Incorporation of gene ontology in identification of protein interactions from biomedical corpus: a multi-modal approach","publication_year":2022,"publication_date":"2022-01-17","ids":{"openalex":"https://openalex.org/W4206055694","doi":"https://doi.org/10.1007/s10479-022-04527-4"},"language":"en","primary_location":{"id":"doi:10.1007/s10479-022-04527-4","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s10479-022-04527-4","pdf_url":null,"source":{"id":"https://openalex.org/S57667410","display_name":"Annals of Operations Research","issn_l":"0254-5330","issn":["0254-5330","1572-9338"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Annals of Operations Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5053086856","display_name":"Kanchan Jha","orcid":"https://orcid.org/0000-0003-3837-3083"},"institutions":[{"id":"https://openalex.org/I132153292","display_name":"Indian Institute of Technology Patna","ror":"https://ror.org/01ft5vz71","country_code":"IN","type":"education","lineage":["https://openalex.org/I132153292"]}],"countries":["IN"],"is_corresponding":true,"raw_author_name":"Kanchan Jha","raw_affiliation_strings":["Department of Computer Science and Engineering, Indian Institute of Technology Patna, Patna, Bihar, 801103, India"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, Indian Institute of Technology Patna, Patna, Bihar, 801103, India","institution_ids":["https://openalex.org/I132153292"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5060797340","display_name":"Sriparna Saha","orcid":"https://orcid.org/0000-0001-5458-9381"},"institutions":[{"id":"https://openalex.org/I132153292","display_name":"Indian Institute of Technology Patna","ror":"https://ror.org/01ft5vz71","country_code":"IN","type":"education","lineage":["https://openalex.org/I132153292"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Sriparna Saha","raw_affiliation_strings":["Department of Computer Science and Engineering, Indian Institute of Technology Patna, Patna, Bihar, 801103, India"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, Indian Institute of Technology Patna, Patna, Bihar, 801103, India","institution_ids":["https://openalex.org/I132153292"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5007048284","display_name":"Pratik Dutta","orcid":"https://orcid.org/0000-0002-1579-8946"},"institutions":[{"id":"https://openalex.org/I132153292","display_name":"Indian Institute of Technology Patna","ror":"https://ror.org/01ft5vz71","country_code":"IN","type":"education","lineage":["https://openalex.org/I132153292"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Pratik Dutta","raw_affiliation_strings":["Department of Computer Science and Engineering, Indian Institute of Technology Patna, Patna, Bihar, 801103, India"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, Indian Institute of Technology Patna, Patna, Bihar, 801103, India","institution_ids":["https://openalex.org/I132153292"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5053086856"],"corresponding_institution_ids":["https://openalex.org/I132153292"],"apc_list":{"value":2390,"currency":"EUR","value_usd":2990},"apc_paid":null,"fwci":0.0868,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.39948833,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":"339","issue":"3","first_page":"1793","last_page":"1811"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9962999820709229,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9952999949455261,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7992422580718994},{"id":"https://openalex.org/keywords/benchmark","display_name":"Benchmark (surveying)","score":0.7424592971801758},{"id":"https://openalex.org/keywords/modal","display_name":"Modal","score":0.6983394622802734},{"id":"https://openalex.org/keywords/ontology","display_name":"Ontology","score":0.6353883743286133},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5424204468727112},{"id":"https://openalex.org/keywords/gene-ontology","display_name":"Gene ontology","score":0.5363693237304688},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.5332754850387573},{"id":"https://openalex.org/keywords/theory-of-computation","display_name":"Theory of computation","score":0.512108564376831},{"id":"https://openalex.org/keywords/modalities","display_name":"Modalities","score":0.4836488962173462},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.4746295213699341},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.4500279724597931},{"id":"https://openalex.org/keywords/deep-learning","display_name":"Deep learning","score":0.4436531662940979},{"id":"https://openalex.org/keywords/domain","display_name":"Domain (mathematical analysis)","score":0.414800226688385},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.3709011673927307},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.18715384602546692},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.10094016790390015},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.07950964570045471}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7992422580718994},{"id":"https://openalex.org/C185798385","wikidata":"https://www.wikidata.org/wiki/Q1161707","display_name":"Benchmark (surveying)","level":2,"score":0.7424592971801758},{"id":"https://openalex.org/C71139939","wikidata":"https://www.wikidata.org/wiki/Q910194","display_name":"Modal","level":2,"score":0.6983394622802734},{"id":"https://openalex.org/C25810664","wikidata":"https://www.wikidata.org/wiki/Q44325","display_name":"Ontology","level":2,"score":0.6353883743286133},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5424204468727112},{"id":"https://openalex.org/C2987395477","wikidata":"https://www.wikidata.org/wiki/Q135085","display_name":"Gene ontology","level":4,"score":0.5363693237304688},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.5332754850387573},{"id":"https://openalex.org/C24858836","wikidata":"https://www.wikidata.org/wiki/Q844718","display_name":"Theory of computation","level":2,"score":0.512108564376831},{"id":"https://openalex.org/C2779903281","wikidata":"https://www.wikidata.org/wiki/Q6888026","display_name":"Modalities","level":2,"score":0.4836488962173462},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.4746295213699341},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.4500279724597931},{"id":"https://openalex.org/C108583219","wikidata":"https://www.wikidata.org/wiki/Q197536","display_name":"Deep learning","level":2,"score":0.4436531662940979},{"id":"https://openalex.org/C36503486","wikidata":"https://www.wikidata.org/wiki/Q11235244","display_name":"Domain (mathematical analysis)","level":2,"score":0.414800226688385},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.3709011673927307},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.18715384602546692},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.10094016790390015},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.07950964570045471},{"id":"https://openalex.org/C13280743","wikidata":"https://www.wikidata.org/wiki/Q131089","display_name":"Geodesy","level":1,"score":0.0},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.0},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0},{"id":"https://openalex.org/C36289849","wikidata":"https://www.wikidata.org/wiki/Q34749","display_name":"Social science","level":1,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.0},{"id":"https://openalex.org/C144024400","wikidata":"https://www.wikidata.org/wiki/Q21201","display_name":"Sociology","level":0,"score":0.0},{"id":"https://openalex.org/C205649164","wikidata":"https://www.wikidata.org/wiki/Q1071","display_name":"Geography","level":0,"score":0.0},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0},{"id":"https://openalex.org/C188027245","wikidata":"https://www.wikidata.org/wiki/Q750446","display_name":"Polymer chemistry","level":1,"score":0.0},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1007/s10479-022-04527-4","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s10479-022-04527-4","pdf_url":null,"source":{"id":"https://openalex.org/S57667410","display_name":"Annals of Operations Research","issn_l":"0254-5330","issn":["0254-5330","1572-9338"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Annals of Operations Research","raw_type":"journal-article"},{"id":"pmh:oai:RePEc:spr:annopr:v:339:y:2024:i:3:d:10.1007_s10479-022-04527-4","is_oa":false,"landing_page_url":"http://link.springer.com/10.1007/s10479-022-04527-4","pdf_url":null,"source":{"id":"https://openalex.org/S4306401271","display_name":"RePEc: Research Papers in Economics","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I77793887","host_organization_name":"Federal Reserve Bank of St. Louis","host_organization_lineage":["https://openalex.org/I77793887"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"article"}],"best_oa_location":null,"sustainable_development_goals":[{"display_name":"Zero hunger","id":"https://metadata.un.org/sdg/2","score":0.4099999964237213}],"awards":[{"id":"https://openalex.org/G400005903","display_name":null,"funder_award_id":"ECR/2017/001915","funder_id":"https://openalex.org/F4320334771","funder_display_name":"Science and Engineering Research Board"}],"funders":[{"id":"https://openalex.org/F4320334771","display_name":"Science and Engineering Research Board","ror":"https://ror.org/03ffdsr55"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":46,"referenced_works":["https://openalex.org/W151685798","https://openalex.org/W224064951","https://openalex.org/W1549159750","https://openalex.org/W1604685658","https://openalex.org/W1969114498","https://openalex.org/W1987170279","https://openalex.org/W1990794790","https://openalex.org/W2016928406","https://openalex.org/W2048059249","https://openalex.org/W2084168100","https://openalex.org/W2098551466","https://openalex.org/W2099119910","https://openalex.org/W2109070394","https://openalex.org/W2121844933","https://openalex.org/W2148146609","https://openalex.org/W2166111585","https://openalex.org/W2166474856","https://openalex.org/W2182852176","https://openalex.org/W2194775991","https://openalex.org/W2342313026","https://openalex.org/W2370746078","https://openalex.org/W2465246611","https://openalex.org/W2556858158","https://openalex.org/W2608694595","https://openalex.org/W2615066396","https://openalex.org/W2740154943","https://openalex.org/W2768342049","https://openalex.org/W2773368817","https://openalex.org/W2803232531","https://openalex.org/W2904726360","https://openalex.org/W2911489562","https://openalex.org/W2913919422","https://openalex.org/W2962969117","https://openalex.org/W2963078194","https://openalex.org/W2963686995","https://openalex.org/W2964245886","https://openalex.org/W2964348125","https://openalex.org/W2964758338","https://openalex.org/W2978855205","https://openalex.org/W3000369298","https://openalex.org/W3034456004","https://openalex.org/W3136031552","https://openalex.org/W3138951883","https://openalex.org/W3213921542","https://openalex.org/W4231824804","https://openalex.org/W6743446608"],"related_works":["https://openalex.org/W2185469136","https://openalex.org/W4306353150","https://openalex.org/W8219677","https://openalex.org/W3216879894","https://openalex.org/W2168054807","https://openalex.org/W2058990474","https://openalex.org/W2026860389","https://openalex.org/W2043363698","https://openalex.org/W4301143707","https://openalex.org/W2952745240"],"abstract_inverted_index":null,"counts_by_year":[{"year":2024,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}