{"id":"https://openalex.org/W4415725621","doi":"https://doi.org/10.1007/s10462-025-11408-2","title":"A review of artificial intelligence in herbarium specimen image analysis","display_name":"A review of artificial intelligence in herbarium specimen image analysis","publication_year":2025,"publication_date":"2025-10-31","ids":{"openalex":"https://openalex.org/W4415725621","doi":"https://doi.org/10.1007/s10462-025-11408-2"},"language":"en","primary_location":{"id":"doi:10.1007/s10462-025-11408-2","is_oa":true,"landing_page_url":"https://doi.org/10.1007/s10462-025-11408-2","pdf_url":"https://link.springer.com/content/pdf/10.1007/s10462-025-11408-2.pdf","source":{"id":"https://openalex.org/S122814990","display_name":"Artificial Intelligence Review","issn_l":"0269-2821","issn":["0269-2821","1573-7462"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Artificial Intelligence Review","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://link.springer.com/content/pdf/10.1007/s10462-025-11408-2.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5071638388","display_name":"Yue Guo","orcid":"https://orcid.org/0000-0003-4290-7228"},"institutions":[{"id":"https://openalex.org/I143804889","display_name":"Loughborough University","ror":"https://ror.org/04vg4w365","country_code":"GB","type":"education","lineage":["https://openalex.org/I143804889"]},{"id":"https://openalex.org/I2799614521","display_name":"Royal Botanic Gardens, Kew","ror":"https://ror.org/00ynnr806","country_code":"GB","type":"archive","lineage":["https://openalex.org/I2799614521"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"Yu-Yue Guo","raw_affiliation_strings":["Department of Computer Science, Loughborough University, Loughborough, LE11 3TU, UK","Herbarium, Royal Botanic Gardens, Kew, Richmond, TW9 3AE, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Loughborough University, Loughborough, LE11 3TU, UK","institution_ids":["https://openalex.org/I143804889"]},{"raw_affiliation_string":"Herbarium, Royal Botanic Gardens, Kew, Richmond, TW9 3AE, UK","institution_ids":["https://openalex.org/I2799614521"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101931026","display_name":"Haibin Cai","orcid":"https://orcid.org/0000-0003-1398-6676"},"institutions":[{"id":"https://openalex.org/I143804889","display_name":"Loughborough University","ror":"https://ror.org/04vg4w365","country_code":"GB","type":"education","lineage":["https://openalex.org/I143804889"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Haibin Cai","raw_affiliation_strings":["Department of Computer Science, Loughborough University, Loughborough, LE11 3TU, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Loughborough University, Loughborough, LE11 3TU, UK","institution_ids":["https://openalex.org/I143804889"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5080367202","display_name":"Gemma L. C. Bramley","orcid":"https://orcid.org/0000-0003-0893-6789"},"institutions":[{"id":"https://openalex.org/I2799614521","display_name":"Royal Botanic Gardens, Kew","ror":"https://ror.org/00ynnr806","country_code":"GB","type":"archive","lineage":["https://openalex.org/I2799614521"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Gemma L. C. Bramley","raw_affiliation_strings":["Herbarium, Royal Botanic Gardens, Kew, Richmond, TW9 3AE, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Herbarium, Royal Botanic Gardens, Kew, Richmond, TW9 3AE, UK","institution_ids":["https://openalex.org/I2799614521"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5007513867","display_name":"Hannah Atkins","orcid":"https://orcid.org/0000-0002-3523-1883"},"institutions":[{"id":"https://openalex.org/I167261309","display_name":"Royal Botanic Garden Edinburgh","ror":"https://ror.org/0349vqz63","country_code":"GB","type":"facility","lineage":["https://openalex.org/I167261309"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Hannah J. Atkins","raw_affiliation_strings":["Royal Botanic Garden Edinburgh, Edinburgh, EH3 5LR, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Royal Botanic Garden Edinburgh, Edinburgh, EH3 5LR, UK","institution_ids":["https://openalex.org/I167261309"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5072835010","display_name":"Baihua Li","orcid":"https://orcid.org/0000-0002-4930-7690"},"institutions":[{"id":"https://openalex.org/I143804889","display_name":"Loughborough University","ror":"https://ror.org/04vg4w365","country_code":"GB","type":"education","lineage":["https://openalex.org/I143804889"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Baihua Li","raw_affiliation_strings":["Department of Computer Science, Loughborough University, Loughborough, LE11 3TU, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Loughborough University, Loughborough, LE11 3TU, UK","institution_ids":["https://openalex.org/I143804889"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5022369165","display_name":"Stephanos Theodossiades","orcid":"https://orcid.org/0000-0002-5810-2419"},"institutions":[{"id":"https://openalex.org/I143804889","display_name":"Loughborough University","ror":"https://ror.org/04vg4w365","country_code":"GB","type":"education","lineage":["https://openalex.org/I143804889"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Stephanos Theodossiades","raw_affiliation_strings":["Department of Computer Science, Loughborough University, Loughborough, LE11 3TU, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Loughborough University, Loughborough, LE11 3TU, UK","institution_ids":["https://openalex.org/I143804889"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5071638388"],"corresponding_institution_ids":["https://openalex.org/I143804889","https://openalex.org/I2799614521"],"apc_list":{"value":2490,"currency":"EUR","value_usd":3090},"apc_paid":{"value":2490,"currency":"EUR","value_usd":3090},"fwci":0.0,"has_fulltext":true,"cited_by_count":0,"citation_normalized_percentile":{"value":0.2104743,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"58","issue":"12","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10616","display_name":"Smart Agriculture and AI","score":0.12600000202655792,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10616","display_name":"Smart Agriculture and AI","score":0.12600000202655792,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10895","display_name":"Species Distribution and Climate Change","score":0.10109999775886536,"subfield":{"id":"https://openalex.org/subfields/2302","display_name":"Ecological Modeling"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T13568","display_name":"Wood and Agarwood Research","score":0.08399999886751175,"subfield":{"id":"https://openalex.org/subfields/1605","display_name":"Organic Chemistry"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/herbarium","display_name":"Herbarium","score":0.7170000076293945},{"id":"https://openalex.org/keywords/interpretability","display_name":"Interpretability","score":0.6581000089645386},{"id":"https://openalex.org/keywords/convolutional-neural-network","display_name":"Convolutional neural network","score":0.5551999807357788},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.48750001192092896},{"id":"https://openalex.org/keywords/tracing","display_name":"Tracing","score":0.38420000672340393},{"id":"https://openalex.org/keywords/image-processing","display_name":"Image processing","score":0.3734000027179718},{"id":"https://openalex.org/keywords/scalability","display_name":"Scalability","score":0.3587999939918518},{"id":"https://openalex.org/keywords/resource","display_name":"Resource (disambiguation)","score":0.3465999960899353}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7340999841690063},{"id":"https://openalex.org/C78945076","wikidata":"https://www.wikidata.org/wiki/Q181916","display_name":"Herbarium","level":2,"score":0.7170000076293945},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.6715999841690063},{"id":"https://openalex.org/C2781067378","wikidata":"https://www.wikidata.org/wiki/Q17027399","display_name":"Interpretability","level":2,"score":0.6581000089645386},{"id":"https://openalex.org/C81363708","wikidata":"https://www.wikidata.org/wiki/Q17084460","display_name":"Convolutional neural network","level":2,"score":0.5551999807357788},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.48750001192092896},{"id":"https://openalex.org/C138673069","wikidata":"https://www.wikidata.org/wiki/Q322229","display_name":"Tracing","level":2,"score":0.38420000672340393},{"id":"https://openalex.org/C9417928","wikidata":"https://www.wikidata.org/wiki/Q1070689","display_name":"Image processing","level":3,"score":0.3734000027179718},{"id":"https://openalex.org/C48044578","wikidata":"https://www.wikidata.org/wiki/Q727490","display_name":"Scalability","level":2,"score":0.3587999939918518},{"id":"https://openalex.org/C206345919","wikidata":"https://www.wikidata.org/wiki/Q20380951","display_name":"Resource (disambiguation)","level":2,"score":0.3465999960899353},{"id":"https://openalex.org/C75294576","wikidata":"https://www.wikidata.org/wiki/Q5165192","display_name":"Contextual image classification","level":3,"score":0.3384999930858612},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.33320000767707825},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.325300008058548},{"id":"https://openalex.org/C50644808","wikidata":"https://www.wikidata.org/wiki/Q192776","display_name":"Artificial neural network","level":2,"score":0.3237999975681305},{"id":"https://openalex.org/C108583219","wikidata":"https://www.wikidata.org/wiki/Q197536","display_name":"Deep learning","level":2,"score":0.3138999938964844},{"id":"https://openalex.org/C2777601683","wikidata":"https://www.wikidata.org/wiki/Q6499736","display_name":"Vocabulary","level":2,"score":0.3124000132083893},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.3070000112056732},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.2987000048160553},{"id":"https://openalex.org/C52622490","wikidata":"https://www.wikidata.org/wiki/Q1026626","display_name":"Feature extraction","level":2,"score":0.28279998898506165},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.2797999978065491},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.2743000090122223},{"id":"https://openalex.org/C42781572","wikidata":"https://www.wikidata.org/wiki/Q1250322","display_name":"Digital image","level":4,"score":0.27300000190734863},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.2711000144481659},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.26750001311302185},{"id":"https://openalex.org/C93518851","wikidata":"https://www.wikidata.org/wiki/Q180160","display_name":"Metadata","level":2,"score":0.26429998874664307}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1007/s10462-025-11408-2","is_oa":true,"landing_page_url":"https://doi.org/10.1007/s10462-025-11408-2","pdf_url":"https://link.springer.com/content/pdf/10.1007/s10462-025-11408-2.pdf","source":{"id":"https://openalex.org/S122814990","display_name":"Artificial Intelligence Review","issn_l":"0269-2821","issn":["0269-2821","1573-7462"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Artificial Intelligence Review","raw_type":"journal-article"},{"id":"pmh:oai:figshare.com:article/30329236","is_oa":true,"landing_page_url":null,"pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Journal contribution"}],"best_oa_location":{"id":"doi:10.1007/s10462-025-11408-2","is_oa":true,"landing_page_url":"https://doi.org/10.1007/s10462-025-11408-2","pdf_url":"https://link.springer.com/content/pdf/10.1007/s10462-025-11408-2.pdf","source":{"id":"https://openalex.org/S122814990","display_name":"Artificial Intelligence Review","issn_l":"0269-2821","issn":["0269-2821","1573-7462"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Artificial Intelligence Review","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4415725621.pdf","grobid_xml":"https://content.openalex.org/works/W4415725621.grobid-xml"},"referenced_works_count":127,"referenced_works":["https://openalex.org/W38194800","https://openalex.org/W1864163817","https://openalex.org/W1901129140","https://openalex.org/W1984956186","https://openalex.org/W1987869189","https://openalex.org/W2031489346","https://openalex.org/W2050888782","https://openalex.org/W2053204566","https://openalex.org/W2083952240","https://openalex.org/W2097117768","https://openalex.org/W2107347656","https://openalex.org/W2108598243","https://openalex.org/W2112796928","https://openalex.org/W2119880843","https://openalex.org/W2159327312","https://openalex.org/W2160685408","https://openalex.org/W2179969133","https://openalex.org/W2194775991","https://openalex.org/W2215871252","https://openalex.org/W2295107390","https://openalex.org/W2299597245","https://openalex.org/W2327209116","https://openalex.org/W2327909713","https://openalex.org/W2406709078","https://openalex.org/W2470803522","https://openalex.org/W2513370137","https://openalex.org/W2513529852","https://openalex.org/W2552011409","https://openalex.org/W2588379519","https://openalex.org/W2618180185","https://openalex.org/W2743583628","https://openalex.org/W2762959207","https://openalex.org/W2765284508","https://openalex.org/W2783847648","https://openalex.org/W2801749883","https://openalex.org/W2809392135","https://openalex.org/W2885150722","https://openalex.org/W2900001891","https://openalex.org/W2910637053","https://openalex.org/W2911180409","https://openalex.org/W2924707097","https://openalex.org/W2953128414","https://openalex.org/W2962835968","https://openalex.org/W2962858109","https://openalex.org/W2963351448","https://openalex.org/W2963407932","https://openalex.org/W2963446712","https://openalex.org/W2963610729","https://openalex.org/W2963691377","https://openalex.org/W2963801405","https://openalex.org/W2969985801","https://openalex.org/W2970231061","https://openalex.org/W3011110894","https://openalex.org/W3024414693","https://openalex.org/W3025914776","https://openalex.org/W3034942609","https://openalex.org/W3035524453","https://openalex.org/W3037532776","https://openalex.org/W3038552057","https://openalex.org/W3038604977","https://openalex.org/W3039900714","https://openalex.org/W3047208617","https://openalex.org/W3108132070","https://openalex.org/W3110784648","https://openalex.org/W3127515314","https://openalex.org/W3127708089","https://openalex.org/W3132936446","https://openalex.org/W3138516171","https://openalex.org/W3174982878","https://openalex.org/W3184787452","https://openalex.org/W3189830125","https://openalex.org/W3201066048","https://openalex.org/W3208012533","https://openalex.org/W4206104640","https://openalex.org/W4210524759","https://openalex.org/W4210600383","https://openalex.org/W4210703993","https://openalex.org/W4220724594","https://openalex.org/W4223490351","https://openalex.org/W4280621688","https://openalex.org/W4282009725","https://openalex.org/W4287212576","https://openalex.org/W4292435307","https://openalex.org/W4297540028","https://openalex.org/W4297808394","https://openalex.org/W4308842369","https://openalex.org/W4312629998","https://openalex.org/W4313007769","https://openalex.org/W4322740557","https://openalex.org/W4327810158","https://openalex.org/W4376312661","https://openalex.org/W4382490555","https://openalex.org/W4384648639","https://openalex.org/W4385830672","https://openalex.org/W4385982598","https://openalex.org/W4386071707","https://openalex.org/W4386076084","https://openalex.org/W4386751081","https://openalex.org/W4387665825","https://openalex.org/W4387667658","https://openalex.org/W4388489043","https://openalex.org/W4389272141","https://openalex.org/W4390563534","https://openalex.org/W4390873312","https://openalex.org/W4394668313","https://openalex.org/W4395066804","https://openalex.org/W4400518636","https://openalex.org/W4402088577","https://openalex.org/W4402770330","https://openalex.org/W4403444519","https://openalex.org/W4403499158","https://openalex.org/W4404071291","https://openalex.org/W4404239528","https://openalex.org/W4404563602","https://openalex.org/W4404826346","https://openalex.org/W4406488712","https://openalex.org/W4407319456","https://openalex.org/W4407574734","https://openalex.org/W4409585893","https://openalex.org/W4410409995","https://openalex.org/W4410480075","https://openalex.org/W4410870963","https://openalex.org/W4411435050","https://openalex.org/W4413144749","https://openalex.org/W6945284013","https://openalex.org/W6967473859","https://openalex.org/W6968201385"],"related_works":[],"abstract_inverted_index":{"Abstract":[0],"The":[1],"digitisation":[2],"of":[3,5,7,27,34,62],"hundreds":[4],"millions":[6],"herbarium":[8,66,102],"specimen":[9,106,130],"images":[10],"and":[11,22,48,50,81,117,138],"their":[12,135],"labels":[13],"has":[14],"created":[15],"an":[16,58],"unprecedented":[17],"resource":[18],"for":[19,65],"taxonomy,":[20],"ecology,":[21],"conservation,":[23],"motivating":[24],"the":[25,70,93],"development":[26,71],"artificial":[28],"intelligence":[29],"(AI)":[30],"solutions.":[31],"Automated":[32],"analysis":[33,132],"these":[35],"high-resolution":[36],"scans":[37],"faces":[38],"significant":[39],"challenges,":[40],"including":[41,105],"data":[42],"imbalance,":[43],"information":[44],"loss,":[45],"model":[46],"interpretability":[47],"explainability,":[49],"scalable":[51],"Open-Set":[52],"Recognition":[53],"(OSR).":[54],"This":[55],"paper":[56],"provides":[57],"in-depth":[59],"algorithm-level":[60],"review":[61,94,125],"AI":[63],"methodologies":[64],"image":[67,103,107,131],"classification,":[68,92],"tracing":[69],"from":[72],"classical":[73],"classification":[74],"models":[75],"like":[76],"Convolutional":[77],"Neural":[78],"Networks":[79],"(CNNs)":[80],"Vision":[82],"Transformers":[83],"(ViTs)":[84],"to":[85,91,101],"cutting-edge":[86],"multimodal":[87],"frameworks.":[88],"In":[89],"addition":[90],"further":[95],"investigates":[96],"vision-based":[97],"analytical":[98],"tasks":[99],"critical":[100],"analysis,":[104],"segmentation,":[108],"label":[109],"text":[110],"identification":[111],"using":[112],"Large":[113],"Language":[114],"Models":[115],"(LLMs),":[116],"Human-in-the-Loop":[118],"(HITL)":[119],"quality":[120],"assurance":[121],"strategies.":[122],"Furthermore,":[123],"this":[124],"reveals":[126],"practical":[127],"challenges":[128],"in":[129],"along":[133],"with":[134],"promising":[136],"solutions":[137],"potential":[139],"future":[140],"directions.":[141]},"counts_by_year":[],"updated_date":"2026-05-21T06:26:12.895304","created_date":"2025-10-31T00:00:00"}
