{"id":"https://openalex.org/W4409531694","doi":"https://doi.org/10.1007/s10462-025-11213-x","title":"Gene selection for single cell RNA-seq data via fuzzy rough iterative computation model","display_name":"Gene selection for single cell RNA-seq data via fuzzy rough iterative computation model","publication_year":2025,"publication_date":"2025-04-17","ids":{"openalex":"https://openalex.org/W4409531694","doi":"https://doi.org/10.1007/s10462-025-11213-x"},"language":"en","primary_location":{"id":"doi:10.1007/s10462-025-11213-x","is_oa":true,"landing_page_url":"https://doi.org/10.1007/s10462-025-11213-x","pdf_url":"https://link.springer.com/content/pdf/10.1007/s10462-025-11213-x.pdf","source":{"id":"https://openalex.org/S122814990","display_name":"Artificial Intelligence Review","issn_l":"0269-2821","issn":["0269-2821","1573-7462"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Artificial Intelligence Review","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://link.springer.com/content/pdf/10.1007/s10462-025-11213-x.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5086034088","display_name":"Zhaowen Li","orcid":"https://orcid.org/0000-0002-4437-9214"},"institutions":[{"id":"https://openalex.org/I64449678","display_name":"Putian University","ror":"https://ror.org/00jmsxk74","country_code":"CN","type":"education","lineage":["https://openalex.org/I64449678"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zhaowen Li","raw_affiliation_strings":["Fujian Key Laboratory of Financial Information Processing, Key Laboratory of Applied Mathematics, Putian University, Putian, 351100, Fujian, P.R. China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Fujian Key Laboratory of Financial Information Processing, Key Laboratory of Applied Mathematics, Putian University, Putian, 351100, Fujian, P.R. China","institution_ids":["https://openalex.org/I64449678"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100753720","display_name":"Jie Zhang","orcid":"https://orcid.org/0000-0002-1078-1766"},"institutions":[{"id":"https://openalex.org/I4210122543","display_name":"Guangdong Polytechnic Normal University","ror":"https://ror.org/02pcb5m77","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210122543"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Jie Zhang","raw_affiliation_strings":["School of Computer and Information Engineering, Guangdong Songshan Polytechnic, Shaoguan, 512126, Guangdong, P.R. China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computer and Information Engineering, Guangdong Songshan Polytechnic, Shaoguan, 512126, Guangdong, P.R. China","institution_ids":["https://openalex.org/I4210122543"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5009998148","display_name":"Yuxian Wang","orcid":"https://orcid.org/0000-0002-8736-5541"},"institutions":[{"id":"https://openalex.org/I4210122543","display_name":"Guangdong Polytechnic Normal University","ror":"https://ror.org/02pcb5m77","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210122543"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yuxian Wang","raw_affiliation_strings":["School of Computer and Information Engineering, Guangdong Songshan Polytechnic, Shaoguan, 512126, Guangdong, P.R. China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computer and Information Engineering, Guangdong Songshan Polytechnic, Shaoguan, 512126, Guangdong, P.R. China","institution_ids":["https://openalex.org/I4210122543"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100453033","display_name":"Fang Liu","orcid":"https://orcid.org/0000-0001-9752-9530"},"institutions":[{"id":"https://openalex.org/I150807315","display_name":"Guangxi University","ror":"https://ror.org/02c9qn167","country_code":"CN","type":"education","lineage":["https://openalex.org/I150807315"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Fang Liu","raw_affiliation_strings":["School of Mathematics and Information Science, Guangxi University, Nanning, 530004, Guangxi, P.R. China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Mathematics and Information Science, Guangxi University, Nanning, 530004, Guangxi, P.R. China","institution_ids":["https://openalex.org/I150807315"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5048672189","display_name":"Ching\u2010Feng Wen","orcid":"https://orcid.org/0000-0001-8900-761X"},"institutions":[{"id":"https://openalex.org/I152743029","display_name":"Kaohsiung Medical University","ror":"https://ror.org/03gk81f96","country_code":"TW","type":"education","lineage":["https://openalex.org/I152743029"]},{"id":"https://openalex.org/I2802587341","display_name":"Kaohsiung Medical University Chung-Ho Memorial Hospital","ror":"https://ror.org/02xmkec90","country_code":"TW","type":"healthcare","lineage":["https://openalex.org/I2802587341"]}],"countries":["TW"],"is_corresponding":true,"raw_author_name":"Ching-Feng Wen","raw_affiliation_strings":["Center for Fundamental Science, and Research Center for Nonlinear Analysis and Optimization, Kaohsiung Medical University, Kaohsiung, 80708, Taiwan","Department of Medical Research, Kaohsiung Medical University Hospital, Kaohsiung, 80708, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Fundamental Science, and Research Center for Nonlinear Analysis and Optimization, Kaohsiung Medical University, Kaohsiung, 80708, Taiwan","institution_ids":["https://openalex.org/I152743029"]},{"raw_affiliation_string":"Department of Medical Research, Kaohsiung Medical University Hospital, Kaohsiung, 80708, Taiwan","institution_ids":["https://openalex.org/I152743029","https://openalex.org/I2802587341"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5048672189","https://openalex.org/A5100753720"],"corresponding_institution_ids":["https://openalex.org/I152743029","https://openalex.org/I2802587341","https://openalex.org/I4210122543"],"apc_list":{"value":3090,"currency":"USD","value_usd":3090},"apc_paid":{"value":3090,"currency":"USD","value_usd":3090},"fwci":0.0,"has_fulltext":true,"cited_by_count":0,"citation_normalized_percentile":{"value":0.0787125,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"58","issue":"7","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11063","display_name":"Rough Sets and Fuzzy Logic","score":0.9948999881744385,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11063","display_name":"Rough Sets and Fuzzy Logic","score":0.9948999881744385,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10538","display_name":"Data Mining Algorithms and Applications","score":0.9696000218391418,"subfield":{"id":"https://openalex.org/subfields/1710","display_name":"Information Systems"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11490","display_name":"Hydrological Forecasting Using AI","score":0.9613000154495239,"subfield":{"id":"https://openalex.org/subfields/2305","display_name":"Environmental Engineering"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/rna-seq","display_name":"RNA-Seq","score":0.7406679391860962},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.706540584564209},{"id":"https://openalex.org/keywords/computation","display_name":"Computation","score":0.5440428256988525},{"id":"https://openalex.org/keywords/fuzzy-logic","display_name":"Fuzzy logic","score":0.5389199256896973},{"id":"https://openalex.org/keywords/selection","display_name":"Selection (genetic algorithm)","score":0.42368364334106445},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3543204963207245},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.291979044675827},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.2616373896598816},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.20636656880378723},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.14833390712738037},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.08994755148887634},{"id":"https://openalex.org/keywords/transcriptome","display_name":"Transcriptome","score":0.0861215889453888}],"concepts":[{"id":"https://openalex.org/C107397762","wikidata":"https://www.wikidata.org/wiki/Q2542347","display_name":"RNA-Seq","level":5,"score":0.7406679391860962},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.706540584564209},{"id":"https://openalex.org/C45374587","wikidata":"https://www.wikidata.org/wiki/Q12525525","display_name":"Computation","level":2,"score":0.5440428256988525},{"id":"https://openalex.org/C58166","wikidata":"https://www.wikidata.org/wiki/Q224821","display_name":"Fuzzy logic","level":2,"score":0.5389199256896973},{"id":"https://openalex.org/C81917197","wikidata":"https://www.wikidata.org/wiki/Q628760","display_name":"Selection (genetic algorithm)","level":2,"score":0.42368364334106445},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3543204963207245},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.291979044675827},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.2616373896598816},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.20636656880378723},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.14833390712738037},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.08994755148887634},{"id":"https://openalex.org/C162317418","wikidata":"https://www.wikidata.org/wiki/Q252857","display_name":"Transcriptome","level":4,"score":0.0861215889453888}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/s10462-025-11213-x","is_oa":true,"landing_page_url":"https://doi.org/10.1007/s10462-025-11213-x","pdf_url":"https://link.springer.com/content/pdf/10.1007/s10462-025-11213-x.pdf","source":{"id":"https://openalex.org/S122814990","display_name":"Artificial Intelligence Review","issn_l":"0269-2821","issn":["0269-2821","1573-7462"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Artificial Intelligence Review","raw_type":"journal-article"}],"best_oa_location":{"id":"doi:10.1007/s10462-025-11213-x","is_oa":true,"landing_page_url":"https://doi.org/10.1007/s10462-025-11213-x","pdf_url":"https://link.springer.com/content/pdf/10.1007/s10462-025-11213-x.pdf","source":{"id":"https://openalex.org/S122814990","display_name":"Artificial Intelligence Review","issn_l":"0269-2821","issn":["0269-2821","1573-7462"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Artificial Intelligence Review","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Zero hunger","score":0.6299999952316284,"id":"https://metadata.un.org/sdg/2"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320318654","display_name":"Guangdong University of Science and Technology","ror":null}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4409531694.pdf","grobid_xml":"https://content.openalex.org/works/W4409531694.grobid-xml"},"referenced_works_count":43,"referenced_works":["https://openalex.org/W1500895378","https://openalex.org/W1963763787","https://openalex.org/W1974162715","https://openalex.org/W1990729297","https://openalex.org/W2007686858","https://openalex.org/W2016944307","https://openalex.org/W2027654459","https://openalex.org/W2036439084","https://openalex.org/W2068881679","https://openalex.org/W2071260583","https://openalex.org/W2084744288","https://openalex.org/W2096166399","https://openalex.org/W2111011053","https://openalex.org/W2111882541","https://openalex.org/W2120205807","https://openalex.org/W2121690903","https://openalex.org/W2137205163","https://openalex.org/W2162364423","https://openalex.org/W2162845119","https://openalex.org/W2233807436","https://openalex.org/W2234223889","https://openalex.org/W2308998873","https://openalex.org/W2324190678","https://openalex.org/W2416404380","https://openalex.org/W2463988862","https://openalex.org/W2470502497","https://openalex.org/W2523419694","https://openalex.org/W2523620612","https://openalex.org/W2549976854","https://openalex.org/W2745134596","https://openalex.org/W2765937321","https://openalex.org/W2766239046","https://openalex.org/W2781216854","https://openalex.org/W2899356345","https://openalex.org/W2935517694","https://openalex.org/W2952429360","https://openalex.org/W2964261936","https://openalex.org/W2982507320","https://openalex.org/W3167599219","https://openalex.org/W3199552928","https://openalex.org/W4232953319","https://openalex.org/W4255833381","https://openalex.org/W4291711305"],"related_works":["https://openalex.org/W4394426846","https://openalex.org/W4200033037","https://openalex.org/W4394543623","https://openalex.org/W4231775656","https://openalex.org/W3213655218","https://openalex.org/W4394560977","https://openalex.org/W2046435967","https://openalex.org/W4205762803","https://openalex.org/W2383646825","https://openalex.org/W4394488504"],"abstract_inverted_index":{"Single":[0],"cell":[1,36,88,186],"RNA-seq":[2,187],"data":[3],"have":[4],"the":[5,57,60,66,75,82,87,110,113,130,145,176,198],"characteristics":[6],"of":[7,59,90,132],"small":[8],"samples,":[9],"high":[10],"dimension":[11],"and":[12,26,81,137,160,210],"noise.":[13],"Due":[14],"to":[15,55,149,189],"these":[16],"characteristics,":[17],"gene":[18,31,37,63,69,78,108,116,165],"selection":[19,32,166],"must":[20],"be":[21],"carried":[22],"out":[23],"before":[24],"clustering":[25],"classifying.":[27],"This":[28,142],"study":[29],"explores":[30],"in":[33,53,122,181],"a":[34,91,123,164],"single":[35,185],"decision":[38],"space":[39],"(":[40,49],"scgd":[41,92,124],"-space)":[42],"via":[43],"fuzzy":[44,83,98,138,157],"rough":[45,134,139,158],"iterative":[46,146],"computation":[47,147],"model":[48,136,143],"FRIC":[50,120,170],"-model).":[51],"First,":[52],"order":[54],"overcome":[56],"strictness":[58],"equality":[61,67],"between":[62,68,77,115],"expression":[64,70,79,117],"values,":[65,80],"values":[71],"is":[72,94,126,172,179,201,208],"replaced":[73],"by":[74],"distance":[76,114],"symmetric":[84,99],"relation":[85],"on":[86,169],"set":[89,135,140],"-space":[93,125],"defined.":[95],"In":[96],"this":[97],"relation,":[100],"two":[101],"variable":[102],"parameters":[103],"are":[104],"introduced:":[105],"one":[106],"controls":[107],"subsets,":[109],"other":[111],"dominates":[112],"values.":[118],"Then,":[119],"-model":[121,171],"established,":[127],"which":[128],"overcomes":[129],"deficiencies":[131],"classical":[133],"model.":[141],"applies":[144],"strategy":[148],"define":[150],"some":[151,205],"evaluation":[152],"functions.":[153,162],"These":[154],"functions":[155],"include":[156],"approximations":[159],"dependency":[161],"Next,":[163],"algorithm":[167,178,200],"based":[168],"designed.":[173],"At":[174],"last,":[175],"designed":[177,199],"testified":[180],"several":[182],"publicly":[183],"open":[184],"datasets":[188],"estimate":[190],"its":[191],"performance.":[192],"The":[193],"experimental":[194],"results":[195],"show":[196],"that":[197],"more":[202],"effective":[203],"than":[204],"existing":[206],"algorithms,":[207],"fast":[209],"does":[211],"not":[212],"occupy":[213],"too":[214],"much":[215],"memory.":[216]},"counts_by_year":[],"updated_date":"2026-07-23T08:03:31.855105","created_date":"2025-10-10T00:00:00"}
