{"id":"https://openalex.org/W2908548153","doi":"https://doi.org/10.1007/s10444-018-09661-x","title":"A computational study of the gene expression in the tryptophan operon with two types of cooperativity","display_name":"A computational study of the gene expression in the tryptophan operon with two types of cooperativity","publication_year":2019,"publication_date":"2019-01-19","ids":{"openalex":"https://openalex.org/W2908548153","doi":"https://doi.org/10.1007/s10444-018-09661-x","mag":"2908548153"},"language":"en","primary_location":{"id":"doi:10.1007/s10444-018-09661-x","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s10444-018-09661-x","pdf_url":null,"source":{"id":"https://openalex.org/S57050787","display_name":"Advances in Computational Mathematics","issn_l":"1019-7168","issn":["1019-7168","1572-9044"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Advances in Computational Mathematics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5083149580","display_name":"Jos\u00e9 Roberto Cant\u00fa-Gonz\u00e1lez","orcid":"https://orcid.org/0000-0001-5616-2947"},"institutions":[{"id":"https://openalex.org/I194672558","display_name":"Universidad Aut\u00f3noma de Coahuila","ror":"https://ror.org/00dpnh189","country_code":"MX","type":"education","lineage":["https://openalex.org/I194672558"]}],"countries":["MX"],"is_corresponding":true,"raw_author_name":"Jos\u00e9 Roberto Cant\u00fa-Gonz\u00e1lez","raw_affiliation_strings":["Universidad Aut\u00f3noma de Coahuila, Escuela de Sistemas PMRV, Real de Catorce 123 Fracc. Los Reales., Cd., Acu\u00f1a, Coahuila, Mexico"],"raw_orcid":"https://orcid.org/0000-0001-5616-2947","affiliations":[{"raw_affiliation_string":"Universidad Aut\u00f3noma de Coahuila, Escuela de Sistemas PMRV, Real de Catorce 123 Fracc. Los Reales., Cd., Acu\u00f1a, Coahuila, Mexico","institution_ids":["https://openalex.org/I194672558"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5031625530","display_name":"Orlando D\u00edaz-Hern\u00e1ndez","orcid":"https://orcid.org/0000-0003-1683-5240"},"institutions":[{"id":"https://openalex.org/I4210136187","display_name":"Universidad Aut\u00f3noma de Chiapas","ror":"https://ror.org/04eexme77","country_code":"MX","type":"education","lineage":["https://openalex.org/I4210136187"]}],"countries":["MX"],"is_corresponding":false,"raw_author_name":"O. D\u00edaz-Hern\u00e1ndez","raw_affiliation_strings":["Universidad Aut\u00f3noma de Chiapas, Facultad de Ciencias en F\u00edsica y Matem\u00e1ticas, Tuxtla Guti\u00e9rrez, Chiapas, Mexico"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Universidad Aut\u00f3noma de Chiapas, Facultad de Ciencias en F\u00edsica y Matem\u00e1ticas, Tuxtla Guti\u00e9rrez, Chiapas, Mexico","institution_ids":["https://openalex.org/I4210136187"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5085184267","display_name":"Elizeth Ram\u00edrez-\u00c1lvarez","orcid":"https://orcid.org/0000-0002-3658-332X"},"institutions":[{"id":"https://openalex.org/I4210136187","display_name":"Universidad Aut\u00f3noma de Chiapas","ror":"https://ror.org/04eexme77","country_code":"MX","type":"education","lineage":["https://openalex.org/I4210136187"]}],"countries":["MX"],"is_corresponding":false,"raw_author_name":"Elizeth Ram\u00edrez-\u00c1lvarez","raw_affiliation_strings":["Universidad Aut\u00f3noma de Chiapas, Facultad de Ciencias en F\u00edsica y Matem\u00e1ticas, Tuxtla Guti\u00e9rrez, Chiapas, Mexico"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Universidad Aut\u00f3noma de Chiapas, Facultad de Ciencias en F\u00edsica y Matem\u00e1ticas, Tuxtla Guti\u00e9rrez, Chiapas, Mexico","institution_ids":["https://openalex.org/I4210136187"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5004384227","display_name":"C. I. Enriquez-Flores","orcid":"https://orcid.org/0000-0002-1110-2905"},"institutions":[{"id":"https://openalex.org/I4210136187","display_name":"Universidad Aut\u00f3noma de Chiapas","ror":"https://ror.org/04eexme77","country_code":"MX","type":"education","lineage":["https://openalex.org/I4210136187"]}],"countries":["MX"],"is_corresponding":false,"raw_author_name":"C. I. Enr\u00edquez Flores","raw_affiliation_strings":["Conacyt-Universidad Aut\u00f3noma de Chiapas, Facultad de Ciencias en F\u00edsica y Matem\u00e1ticas, Tuxtla Guti\u00e9rrez, Chiapas, Mexico"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Conacyt-Universidad Aut\u00f3noma de Chiapas, Facultad de Ciencias en F\u00edsica y Matem\u00e1ticas, Tuxtla Guti\u00e9rrez, Chiapas, Mexico","institution_ids":["https://openalex.org/I4210136187"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5113858039","display_name":"Alondra Rosas","orcid":null},"institutions":[{"id":"https://openalex.org/I4210136187","display_name":"Universidad Aut\u00f3noma de Chiapas","ror":"https://ror.org/04eexme77","country_code":"MX","type":"education","lineage":["https://openalex.org/I4210136187"]}],"countries":["MX"],"is_corresponding":false,"raw_author_name":"A. Flores Rosas","raw_affiliation_strings":["Universidad Aut\u00f3noma de Chiapas, Facultad de Ciencias en F\u00edsica y Matem\u00e1ticas, Tuxtla Guti\u00e9rrez, Chiapas, Mexico"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Universidad Aut\u00f3noma de Chiapas, Facultad de Ciencias en F\u00edsica y Matem\u00e1ticas, Tuxtla Guti\u00e9rrez, Chiapas, Mexico","institution_ids":["https://openalex.org/I4210136187"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5066548614","display_name":"Gerardo J. Escalera Santos","orcid":null},"institutions":[{"id":"https://openalex.org/I4210136187","display_name":"Universidad Aut\u00f3noma de Chiapas","ror":"https://ror.org/04eexme77","country_code":"MX","type":"education","lineage":["https://openalex.org/I4210136187"]}],"countries":["MX"],"is_corresponding":false,"raw_author_name":"Gerardo J. Escalera Santos","raw_affiliation_strings":["Universidad Aut\u00f3noma de Chiapas, Facultad de Ciencias en F\u00edsica y Matem\u00e1ticas, Tuxtla Guti\u00e9rrez, Chiapas, Mexico"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Universidad Aut\u00f3noma de Chiapas, Facultad de Ciencias en F\u00edsica y Matem\u00e1ticas, Tuxtla Guti\u00e9rrez, Chiapas, Mexico","institution_ids":["https://openalex.org/I4210136187"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5083149580"],"corresponding_institution_ids":["https://openalex.org/I194672558"],"apc_list":{"value":2390,"currency":"EUR","value_usd":2990},"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.00326791,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"45","issue":"4","first_page":"1843","last_page":"1851"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9922999739646912,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.9891999959945679,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/cooperativity","display_name":"Cooperativity","score":0.7588592767715454},{"id":"https://openalex.org/keywords/trp-operon","display_name":"trp operon","score":0.6894489526748657},{"id":"https://openalex.org/keywords/computational-science-and-engineering","display_name":"Computational Science and Engineering","score":0.6519125699996948},{"id":"https://openalex.org/keywords/operon","display_name":"Operon","score":0.6364453434944153},{"id":"https://openalex.org/keywords/tryptophan","display_name":"Tryptophan","score":0.5078015923500061},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.4872504770755768},{"id":"https://openalex.org/keywords/expression","display_name":"Expression (computer science)","score":0.48513397574424744},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.4797859787940979},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.4367104768753052},{"id":"https://openalex.org/keywords/type","display_name":"Type (biology)","score":0.42745882272720337},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.40260380506515503},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.3774328827857971},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.34488698840141296},{"id":"https://openalex.org/keywords/lac-operon","display_name":"lac operon","score":0.30544376373291016},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.1567285656929016},{"id":"https://openalex.org/keywords/applied-mathematics","display_name":"Applied mathematics","score":0.14688804745674133},{"id":"https://openalex.org/keywords/paleontology","display_name":"Paleontology","score":0.14021489024162292},{"id":"https://openalex.org/keywords/amino-acid","display_name":"Amino acid","score":0.09212180972099304},{"id":"https://openalex.org/keywords/escherichia-coli","display_name":"Escherichia coli","score":0.08369743824005127}],"concepts":[{"id":"https://openalex.org/C166014724","wikidata":"https://www.wikidata.org/wiki/Q337217","display_name":"Cooperativity","level":2,"score":0.7588592767715454},{"id":"https://openalex.org/C96601446","wikidata":"https://www.wikidata.org/wiki/Q287043","display_name":"trp operon","level":5,"score":0.6894489526748657},{"id":"https://openalex.org/C68597687","wikidata":"https://www.wikidata.org/wiki/Q362601","display_name":"Computational Science and Engineering","level":2,"score":0.6519125699996948},{"id":"https://openalex.org/C203075996","wikidata":"https://www.wikidata.org/wiki/Q139677","display_name":"Operon","level":4,"score":0.6364453434944153},{"id":"https://openalex.org/C2776706248","wikidata":"https://www.wikidata.org/wiki/Q181003","display_name":"Tryptophan","level":3,"score":0.5078015923500061},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.4872504770755768},{"id":"https://openalex.org/C90559484","wikidata":"https://www.wikidata.org/wiki/Q778379","display_name":"Expression (computer science)","level":2,"score":0.48513397574424744},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.4797859787940979},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.4367104768753052},{"id":"https://openalex.org/C2777299769","wikidata":"https://www.wikidata.org/wiki/Q3707858","display_name":"Type (biology)","level":2,"score":0.42745882272720337},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.40260380506515503},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3774328827857971},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.34488698840141296},{"id":"https://openalex.org/C170344550","wikidata":"https://www.wikidata.org/wiki/Q311359","display_name":"lac operon","level":4,"score":0.30544376373291016},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.1567285656929016},{"id":"https://openalex.org/C28826006","wikidata":"https://www.wikidata.org/wiki/Q33521","display_name":"Applied mathematics","level":1,"score":0.14688804745674133},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.14021489024162292},{"id":"https://openalex.org/C515207424","wikidata":"https://www.wikidata.org/wiki/Q8066","display_name":"Amino acid","level":2,"score":0.09212180972099304},{"id":"https://openalex.org/C547475151","wikidata":"https://www.wikidata.org/wiki/Q25419","display_name":"Escherichia coli","level":3,"score":0.08369743824005127},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/s10444-018-09661-x","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s10444-018-09661-x","pdf_url":null,"source":{"id":"https://openalex.org/S57050787","display_name":"Advances in Computational Mathematics","issn_l":"1019-7168","issn":["1019-7168","1572-9044"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Advances in Computational Mathematics","raw_type":"journal-article"}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.6899999976158142,"display_name":"Zero hunger","id":"https://metadata.un.org/sdg/2"}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":63,"referenced_works":["https://openalex.org/W564981950","https://openalex.org/W1183730747","https://openalex.org/W1484657725","https://openalex.org/W1605178405","https://openalex.org/W1876521440","https://openalex.org/W1975094891","https://openalex.org/W1978182054","https://openalex.org/W1979486670","https://openalex.org/W1979570757","https://openalex.org/W1984429906","https://openalex.org/W1993952059","https://openalex.org/W2010951994","https://openalex.org/W2014731896","https://openalex.org/W2015603830","https://openalex.org/W2018435536","https://openalex.org/W2024964669","https://openalex.org/W2025991490","https://openalex.org/W2030603688","https://openalex.org/W2033808070","https://openalex.org/W2045092493","https://openalex.org/W2049060039","https://openalex.org/W2053460598","https://openalex.org/W2056511887","https://openalex.org/W2056953607","https://openalex.org/W2064971479","https://openalex.org/W2074581799","https://openalex.org/W2075607870","https://openalex.org/W2076571051","https://openalex.org/W2076963809","https://openalex.org/W2081434722","https://openalex.org/W2093365325","https://openalex.org/W2096741761","https://openalex.org/W2111489524","https://openalex.org/W2115152262","https://openalex.org/W2115908553","https://openalex.org/W2131011986","https://openalex.org/W2138458807","https://openalex.org/W2138655218","https://openalex.org/W2145487878","https://openalex.org/W2148385534","https://openalex.org/W2151227169","https://openalex.org/W2152370625","https://openalex.org/W2163876231","https://openalex.org/W2164949145","https://openalex.org/W2165284694","https://openalex.org/W2165424496","https://openalex.org/W2167244112","https://openalex.org/W2171648521","https://openalex.org/W2226513257","https://openalex.org/W2257525055","https://openalex.org/W2278076700","https://openalex.org/W2328476071","https://openalex.org/W2342154950","https://openalex.org/W2399914936","https://openalex.org/W2560561330","https://openalex.org/W2586637063","https://openalex.org/W2756220382","https://openalex.org/W2795791343","https://openalex.org/W2797816482","https://openalex.org/W2952846195","https://openalex.org/W3015282942","https://openalex.org/W3102865994","https://openalex.org/W3174931860"],"related_works":["https://openalex.org/W2086425371","https://openalex.org/W1993953940","https://openalex.org/W2373125625","https://openalex.org/W2043921456","https://openalex.org/W2127550585","https://openalex.org/W1874507250","https://openalex.org/W1552896036","https://openalex.org/W2266019307","https://openalex.org/W3126439033","https://openalex.org/W1972146604"],"abstract_inverted_index":null,"counts_by_year":[],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
