{"id":"https://openalex.org/W2603391901","doi":"https://doi.org/10.1007/s10278-017-9966-5","title":"3D Histopathology\u2014a Lung Tissue Segmentation Workflow for Microfocus X-ray-Computed Tomography Scans","display_name":"3D Histopathology\u2014a Lung Tissue Segmentation Workflow for Microfocus X-ray-Computed Tomography Scans","publication_year":2017,"publication_date":"2017-03-24","ids":{"openalex":"https://openalex.org/W2603391901","doi":"https://doi.org/10.1007/s10278-017-9966-5","mag":"2603391901","pmid":"https://pubmed.ncbi.nlm.nih.gov/28342044"},"language":"en","primary_location":{"id":"doi:10.1007/s10278-017-9966-5","is_oa":true,"landing_page_url":"https://doi.org/10.1007/s10278-017-9966-5","pdf_url":"https://link.springer.com/content/pdf/10.1007/s10278-017-9966-5.pdf","source":{"id":"https://openalex.org/S62275304","display_name":"Journal of Digital Imaging","issn_l":"0897-1889","issn":["0897-1889","1618-727X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Digital Imaging","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://link.springer.com/content/pdf/10.1007/s10278-017-9966-5.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5042334707","display_name":"Lasse Wollatz","orcid":"https://orcid.org/0000-0002-8761-7884"},"institutions":[{"id":"https://openalex.org/I43439940","display_name":"University of Southampton","ror":"https://ror.org/01ryk1543","country_code":"GB","type":"education","lineage":["https://openalex.org/I43439940"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"Lasse Wollatz","raw_affiliation_strings":["Faculty of Engineering and the Environment, University of Southampton, Southampton, SO17 1BJ, UK. L.Wollatz@soton.ac.uk","Faculty of Engineering and the Environment, University of Southampton, Southampton, SO17 1BJ, UK"],"raw_orcid":"https://orcid.org/0000-0002-8761-7884","affiliations":[{"raw_affiliation_string":"Faculty of Engineering and the Environment, University of Southampton, Southampton, SO17 1BJ, UK. L.Wollatz@soton.ac.uk","institution_ids":["https://openalex.org/I43439940"]},{"raw_affiliation_string":"Faculty of Engineering and the Environment, University of Southampton, Southampton, SO17 1BJ, UK","institution_ids":["https://openalex.org/I43439940"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110146071","display_name":"Steven J. Johnston","orcid":null},"institutions":[{"id":"https://openalex.org/I43439940","display_name":"University of Southampton","ror":"https://ror.org/01ryk1543","country_code":"GB","type":"education","lineage":["https://openalex.org/I43439940"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Steven J. Johnston","raw_affiliation_strings":["Faculty of Engineering and the Environment, University of Southampton, Southampton, SO17 1BJ, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Faculty of Engineering and the Environment, University of Southampton, Southampton, SO17 1BJ, UK","institution_ids":["https://openalex.org/I43439940"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5043431586","display_name":"Peter M. Lackie","orcid":"https://orcid.org/0000-0001-7138-3764"},"institutions":[{"id":"https://openalex.org/I43439940","display_name":"University of Southampton","ror":"https://ror.org/01ryk1543","country_code":"GB","type":"education","lineage":["https://openalex.org/I43439940"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Peter M. Lackie","raw_affiliation_strings":["Faculty of Medicine, University of Southampton, Southampton, SO17 1BJ, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Faculty of Medicine, University of Southampton, Southampton, SO17 1BJ, UK","institution_ids":["https://openalex.org/I43439940"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5069202553","display_name":"Sim\u00f3n Cox","orcid":"https://orcid.org/0000-0002-3884-3420"},"institutions":[{"id":"https://openalex.org/I43439940","display_name":"University of Southampton","ror":"https://ror.org/01ryk1543","country_code":"GB","type":"education","lineage":["https://openalex.org/I43439940"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Simon J. Cox","raw_affiliation_strings":["Faculty of Engineering and the Environment, University of Southampton, Southampton, SO17 1BJ, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Faculty of Engineering and the Environment, University of Southampton, Southampton, SO17 1BJ, UK","institution_ids":["https://openalex.org/I43439940"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5042334707"],"corresponding_institution_ids":["https://openalex.org/I43439940"],"apc_list":{"value":3190,"currency":"EUR","value_usd":4190},"apc_paid":{"value":3190,"currency":"EUR","value_usd":4190},"fwci":1.5069,"has_fulltext":true,"cited_by_count":13,"citation_normalized_percentile":{"value":0.81625133,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"30","issue":"6","first_page":"772","last_page":"781"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10522","display_name":"Medical Imaging Techniques and Applications","score":0.9962999820709229,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10522","display_name":"Medical Imaging Techniques and Applications","score":0.9962999820709229,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T12422","display_name":"Radiomics and Machine Learning in Medical Imaging","score":0.9961000084877014,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10862","display_name":"AI in cancer detection","score":0.9944000244140625,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/workflow","display_name":"Workflow","score":0.8719077110290527},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7057712078094482},{"id":"https://openalex.org/keywords/segmentation","display_name":"Segmentation","score":0.6867753267288208},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5374155044555664},{"id":"https://openalex.org/keywords/modular-design","display_name":"Modular design","score":0.4893338084220886},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.47401270270347595},{"id":"https://openalex.org/keywords/computer-vision","display_name":"Computer vision","score":0.46578139066696167},{"id":"https://openalex.org/keywords/computed-tomography","display_name":"Computed tomography","score":0.4409676194190979},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.42146438360214233},{"id":"https://openalex.org/keywords/tomography","display_name":"Tomography","score":0.4125729203224182},{"id":"https://openalex.org/keywords/radiology","display_name":"Radiology","score":0.18649405241012573},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.11510223150253296}],"concepts":[{"id":"https://openalex.org/C177212765","wikidata":"https://www.wikidata.org/wiki/Q627335","display_name":"Workflow","level":2,"score":0.8719077110290527},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7057712078094482},{"id":"https://openalex.org/C89600930","wikidata":"https://www.wikidata.org/wiki/Q1423946","display_name":"Segmentation","level":2,"score":0.6867753267288208},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5374155044555664},{"id":"https://openalex.org/C101468663","wikidata":"https://www.wikidata.org/wiki/Q1620158","display_name":"Modular design","level":2,"score":0.4893338084220886},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.47401270270347595},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.46578139066696167},{"id":"https://openalex.org/C544519230","wikidata":"https://www.wikidata.org/wiki/Q32566","display_name":"Computed tomography","level":2,"score":0.4409676194190979},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.42146438360214233},{"id":"https://openalex.org/C163716698","wikidata":"https://www.wikidata.org/wiki/Q841267","display_name":"Tomography","level":2,"score":0.4125729203224182},{"id":"https://openalex.org/C126838900","wikidata":"https://www.wikidata.org/wiki/Q77604","display_name":"Radiology","level":1,"score":0.18649405241012573},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.11510223150253296},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000368","descriptor_name":"Aged","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000368","descriptor_name":"Aged","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000368","descriptor_name":"Aged","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008168","descriptor_name":"Lung","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":false},{"descriptor_ui":"D008168","descriptor_name":"Lung","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":false},{"descriptor_ui":"D008168","descriptor_name":"Lung","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":false},{"descriptor_ui":"D008168","descriptor_name":"Lung","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":false},{"descriptor_ui":"D008168","descriptor_name":"Lung","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":false},{"descriptor_ui":"D008168","descriptor_name":"Lung","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":false},{"descriptor_ui":"D008168","descriptor_name":"Lung","qualifier_ui":"Q000648","qualifier_name":"ultrastructure","is_major_topic":false},{"descriptor_ui":"D008168","descriptor_name":"Lung","qualifier_ui":"Q000648","qualifier_name":"ultrastructure","is_major_topic":false},{"descriptor_ui":"D008168","descriptor_name":"Lung","qualifier_ui":"Q000648","qualifier_name":"ultrastructure","is_major_topic":false},{"descriptor_ui":"D008175","descriptor_name":"Lung Neoplasms","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":false},{"descriptor_ui":"D008175","descriptor_name":"Lung Neoplasms","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":false},{"descriptor_ui":"D008175","descriptor_name":"Lung Neoplasms","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":false},{"descriptor_ui":"D008175","descriptor_name":"Lung Neoplasms","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":false},{"descriptor_ui":"D008175","descriptor_name":"Lung Neoplasms","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":false},{"descriptor_ui":"D008175","descriptor_name":"Lung Neoplasms","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":false},{"descriptor_ui":"D008175","descriptor_name":"Lung Neoplasms","qualifier_ui":"Q000648","qualifier_name":"ultrastructure","is_major_topic":false},{"descriptor_ui":"D008175","descriptor_name":"Lung Neoplasms","qualifier_ui":"Q000648","qualifier_name":"ultrastructure","is_major_topic":false},{"descriptor_ui":"D008175","descriptor_name":"Lung Neoplasms","qualifier_ui":"Q000648","qualifier_name":"ultrastructure","is_major_topic":false},{"descriptor_ui":"D008297","descriptor_name":"Male","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008297","descriptor_name":"Male","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008297","descriptor_name":"Male","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010363","descriptor_name":"Pattern Recognition, Automated","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D010363","descriptor_name":"Pattern Recognition, Automated","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D010363","descriptor_name":"Pattern Recognition, Automated","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D014057","descriptor_name":"Tomography, X-Ray Computed","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D014057","descriptor_name":"Tomography, X-Ray Computed","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D014057","descriptor_name":"Tomography, X-Ray Computed","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D014965","descriptor_name":"X-Rays","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014965","descriptor_name":"X-Rays","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014965","descriptor_name":"X-Rays","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D021621","descriptor_name":"Imaging, Three-Dimensional","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D021621","descriptor_name":"Imaging, Three-Dimensional","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D021621","descriptor_name":"Imaging, Three-Dimensional","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057188","descriptor_name":"Workflow","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057188","descriptor_name":"Workflow","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057188","descriptor_name":"Workflow","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":6,"locations":[{"id":"doi:10.1007/s10278-017-9966-5","is_oa":true,"landing_page_url":"https://doi.org/10.1007/s10278-017-9966-5","pdf_url":"https://link.springer.com/content/pdf/10.1007/s10278-017-9966-5.pdf","source":{"id":"https://openalex.org/S62275304","display_name":"Journal of Digital Imaging","issn_l":"0897-1889","issn":["0897-1889","1618-727X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Digital Imaging","raw_type":"journal-article"},{"id":"pmid:28342044","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/28342044","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of digital imaging","raw_type":null},{"id":"pmh:oai:eprints.soton.ac.uk:406469","is_oa":false,"landing_page_url":null,"pdf_url":null,"source":{"id":"https://openalex.org/S4306401019","display_name":"ePrints Soton (University of Southampton)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I43439940","host_organization_name":"University of Southampton","host_organization_lineage":["https://openalex.org/I43439940"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"","raw_type":"Article"},{"id":"pmh:oai:eprints.soton.ac.uk:420529","is_oa":false,"landing_page_url":"https://eprints.soton.ac.uk/420529/1/10.1007_2Fs10278_017_9966_5.pdf","pdf_url":null,"source":{"id":"https://openalex.org/S4306401020","display_name":"ePrints Soton (University of Southampton)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I43439940","host_organization_name":"University of Southampton","host_organization_lineage":["https://openalex.org/I43439940"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Article"},{"id":"pmh:oai:europepmc.org:4608851","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/5681467","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:researchportal.port.ac.uk:publications/1b98a5b5-913c-4c23-9e32-aef68296f1a2","is_oa":true,"landing_page_url":"https://eprints.soton.ac.uk/406469/","pdf_url":null,"source":{"id":"https://openalex.org/S4306401774","display_name":"Portsmouth Research Portal (University of Portsmouth)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I63072094","host_organization_name":"University of Portsmouth","host_organization_lineage":["https://openalex.org/I63072094"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":""}],"best_oa_location":{"id":"doi:10.1007/s10278-017-9966-5","is_oa":true,"landing_page_url":"https://doi.org/10.1007/s10278-017-9966-5","pdf_url":"https://link.springer.com/content/pdf/10.1007/s10278-017-9966-5.pdf","source":{"id":"https://openalex.org/S62275304","display_name":"Journal of Digital Imaging","issn_l":"0897-1889","issn":["0897-1889","1618-727X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Digital Imaging","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G4431000891","display_name":null,"funder_award_id":"1511465","funder_id":"https://openalex.org/F4320334627","funder_display_name":"Engineering and Physical Sciences Research Council"}],"funders":[{"id":"https://openalex.org/F4320312043","display_name":"University Hospital Southampton NHS Foundation Trust","ror":"https://ror.org/0485axj58"},{"id":"https://openalex.org/F4320320277","display_name":"University of Southampton","ror":"https://ror.org/01ryk1543"},{"id":"https://openalex.org/F4320334627","display_name":"Engineering and Physical Sciences Research Council","ror":"https://ror.org/0439y7842"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2603391901.pdf","grobid_xml":"https://content.openalex.org/works/W2603391901.grobid-xml"},"referenced_works_count":38,"referenced_works":["https://openalex.org/W48715220","https://openalex.org/W568321271","https://openalex.org/W574078859","https://openalex.org/W641918056","https://openalex.org/W1552632109","https://openalex.org/W1938547050","https://openalex.org/W1963492502","https://openalex.org/W1964668862","https://openalex.org/W1970480709","https://openalex.org/W1970881091","https://openalex.org/W1979432452","https://openalex.org/W2008043556","https://openalex.org/W2009911194","https://openalex.org/W2019319323","https://openalex.org/W2040603835","https://openalex.org/W2052713003","https://openalex.org/W2064886326","https://openalex.org/W2080040531","https://openalex.org/W2091569892","https://openalex.org/W2096320880","https://openalex.org/W2099540110","https://openalex.org/W2109214028","https://openalex.org/W2111381594","https://openalex.org/W2112563636","https://openalex.org/W2118386984","https://openalex.org/W2121664961","https://openalex.org/W2131006320","https://openalex.org/W2138825607","https://openalex.org/W2140775860","https://openalex.org/W2167244348","https://openalex.org/W2186130713","https://openalex.org/W2478483022","https://openalex.org/W2567042340","https://openalex.org/W2601810315","https://openalex.org/W2739495561","https://openalex.org/W4247537352","https://openalex.org/W4254340702","https://openalex.org/W4285719527"],"related_works":["https://openalex.org/W1981780420","https://openalex.org/W2182707996","https://openalex.org/W45233828","https://openalex.org/W2964988449","https://openalex.org/W188202134","https://openalex.org/W2397952901","https://openalex.org/W2029380707","https://openalex.org/W4255934811","https://openalex.org/W2465382974","https://openalex.org/W2010229520"],"abstract_inverted_index":{"Lung":[0],"histopathology":[1],"is":[2],"currently":[3],"based":[4,122],"on":[5,124,215],"the":[6,32,39,50,105,146,154,178,206],"analysis":[7,100],"of":[8,11,16,21,34,45,53,81,94,101,112,115,153,175,198,205,211],"2D":[9,127],"sections":[10],"tissue":[12,24,82,102],"samples.":[13,96],"The":[14],"use":[15],"microfocus":[17],"X-ray-computed":[18],"tomography":[19],"imaging":[20],"unstained":[22],"soft":[23],"can":[25],"provide":[26],"high-resolution":[27],"3D":[28,75,99,137],"image":[29,72],"datasets":[30,62],"in":[31,60,209],"range":[33],"2-10":[35],"\u03bcm":[36],"without":[37],"affecting":[38],"current":[40],"diagnostic":[41],"workflow.":[42],"Important":[43],"details":[44],"structural":[46,85],"features":[47],"such":[48,136],"as":[49,189],"tubular":[51,207],"networks":[52,208],"airways":[54],"and":[55,66,84,144,150,183,195],"blood":[56],"vessels":[57],"are":[58,64],"contained":[59],"these":[61],"but":[63],"difficult":[65],"time-consuming":[67],"to":[68,201],"identify":[69],"by":[70],"manual":[71],"segmentation.":[73,203],"Providing":[74],"structures":[76],"permits":[77],"a":[78,90,132,160,172],"better":[79],"understanding":[80],"functions":[83],"interrelationships.":[86],"It":[87],"also":[88],"provides":[89,104],"more":[91],"complete":[92],"picture":[93],"heterogeneous":[95],"In":[97,129],"addition,":[98],"structure":[103,117],"potential":[106],"for":[107,134,180,193],"an":[108,168],"entirely":[109],"new":[110,161],"level":[111],"quantitative":[113],"measurements":[114],"this":[116,130,222],"that":[118],"have":[119,156],"previously":[120],"been":[121,141,157,219],"only":[123],"extrapolation":[125],"from":[126],"sections.":[128],"paper,":[131],"workflow":[133,155,170],"segmenting":[135],"images":[138],"semi-automatically":[139],"has":[140,218],"created":[142],"using":[143,221],"extending":[145],"ImageJ":[147,162],"open-source":[148],"software":[149],"key":[151],"steps":[152,176],"integrated":[158],"into":[159],"plug-in":[163],"called":[164],"LungJ.":[165],"Results":[166],"indicate":[167],"improved":[169],"with":[171,186],"modular":[173],"organization":[174],"facilitating":[177],"optimization":[179,197],"different":[181],"sample":[182],"scan":[184],"properties":[185],"expert":[187],"input":[188],"required.":[190],"This":[191],"allows":[192],"incremental":[194],"independent":[196],"algorithms":[199],"leading":[200],"faster":[202],"Representation":[204],"samples":[210],"human":[212],"lung,":[213],"building":[214],"those":[216],"segmentations,":[217],"demonstrated":[220],"approach.":[223]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2023,"cited_by_count":3},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":2},{"year":2018,"cited_by_count":4},{"year":2017,"cited_by_count":1}],"updated_date":"2026-01-13T01:12:25.745995","created_date":"2025-10-10T00:00:00"}
