{"id":"https://openalex.org/W2792572138","doi":"https://doi.org/10.1007/s10044-018-0680-9","title":"Gene clustering with hidden Markov model optimized by PSO algorithm","display_name":"Gene clustering with hidden Markov model optimized by PSO algorithm","publication_year":2018,"publication_date":"2018-03-01","ids":{"openalex":"https://openalex.org/W2792572138","doi":"https://doi.org/10.1007/s10044-018-0680-9","mag":"2792572138"},"language":"en","primary_location":{"id":"doi:10.1007/s10044-018-0680-9","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s10044-018-0680-9","pdf_url":null,"source":{"id":"https://openalex.org/S45497385","display_name":"Pattern Analysis and Applications","issn_l":"1433-7541","issn":["1433-7541","1433-755X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Pattern Analysis and Applications","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5051423185","display_name":"Mohammad Soruri","orcid":"https://orcid.org/0000-0002-7193-3663"},"institutions":[{"id":"https://openalex.org/I97626857","display_name":"University of Birjand","ror":"https://ror.org/03g4hym73","country_code":"IR","type":"education","lineage":["https://openalex.org/I97626857"]}],"countries":["IR"],"is_corresponding":true,"raw_author_name":"Mohammad Soruri","raw_affiliation_strings":["Faculty of Electrical and Computer Engineering, University of Birjand, Birjand, Iran","Ferdows Faculty of Engineering, University of Birjand, Birjand, Iran"],"raw_orcid":"https://orcid.org/0000-0002-7193-3663","affiliations":[{"raw_affiliation_string":"Faculty of Electrical and Computer Engineering, University of Birjand, Birjand, Iran","institution_ids":["https://openalex.org/I97626857"]},{"raw_affiliation_string":"Ferdows Faculty of Engineering, University of Birjand, Birjand, Iran","institution_ids":["https://openalex.org/I97626857"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5002253076","display_name":"Javad Sadri","orcid":"https://orcid.org/0000-0002-1383-1204"},"institutions":[{"id":"https://openalex.org/I60158472","display_name":"Concordia University","ror":"https://ror.org/0420zvk78","country_code":"CA","type":"education","lineage":["https://openalex.org/I60158472"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Javad Sadri","raw_affiliation_strings":["Department of Computer Science & Software Engineering, Faculty of Engineering and Computer Science, Concordia University, Montreal, Quebec, Canada, H3G 1M8, Montreal, QC, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science & Software Engineering, Faculty of Engineering and Computer Science, Concordia University, Montreal, Quebec, Canada, H3G 1M8, Montreal, QC, Canada","institution_ids":["https://openalex.org/I60158472"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5075446535","display_name":"Seyed Hamid Zahiri","orcid":"https://orcid.org/0000-0002-1280-8133"},"institutions":[{"id":"https://openalex.org/I97626857","display_name":"University of Birjand","ror":"https://ror.org/03g4hym73","country_code":"IR","type":"education","lineage":["https://openalex.org/I97626857"]}],"countries":["IR"],"is_corresponding":false,"raw_author_name":"S. Hamid Zahiri","raw_affiliation_strings":["Faculty of Electrical and Computer Engineering, University of Birjand, Birjand, Iran"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Faculty of Electrical and Computer Engineering, University of Birjand, Birjand, Iran","institution_ids":["https://openalex.org/I97626857"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5051423185"],"corresponding_institution_ids":["https://openalex.org/I97626857"],"apc_list":{"value":2390,"currency":"EUR","value_usd":2990},"apc_paid":null,"fwci":0.8378,"has_fulltext":false,"cited_by_count":15,"citation_normalized_percentile":{"value":0.71907038,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":98},"biblio":{"volume":"21","issue":"4","first_page":"1121","last_page":"1126"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.998199999332428,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.998199999332428,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9936000108718872,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12029","display_name":"DNA and Biological Computing","score":0.9905999898910522,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/cluster-analysis","display_name":"Cluster analysis","score":0.8495153188705444},{"id":"https://openalex.org/keywords/hidden-markov-model","display_name":"Hidden Markov model","score":0.7511433362960815},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.6133437752723694},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5937100052833557},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.5295563340187073},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5235211849212646},{"id":"https://openalex.org/keywords/similarity","display_name":"Similarity (geometry)","score":0.5069475173950195},{"id":"https://openalex.org/keywords/particle-swarm-optimization","display_name":"Particle swarm optimization","score":0.5068541169166565},{"id":"https://openalex.org/keywords/hierarchical-clustering","display_name":"Hierarchical clustering","score":0.5020899772644043},{"id":"https://openalex.org/keywords/correlation-clustering","display_name":"Correlation clustering","score":0.4813726544380188},{"id":"https://openalex.org/keywords/cure-data-clustering-algorithm","display_name":"CURE data clustering algorithm","score":0.4564516544342041},{"id":"https://openalex.org/keywords/single-linkage-clustering","display_name":"Single-linkage clustering","score":0.4476807713508606},{"id":"https://openalex.org/keywords/canopy-clustering-algorithm","display_name":"Canopy clustering algorithm","score":0.4377394914627075},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.4081161916255951},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3653339445590973},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.09737825393676758},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.08008277416229248}],"concepts":[{"id":"https://openalex.org/C73555534","wikidata":"https://www.wikidata.org/wiki/Q622825","display_name":"Cluster analysis","level":2,"score":0.8495153188705444},{"id":"https://openalex.org/C23224414","wikidata":"https://www.wikidata.org/wiki/Q176769","display_name":"Hidden Markov model","level":2,"score":0.7511433362960815},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.6133437752723694},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5937100052833557},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.5295563340187073},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5235211849212646},{"id":"https://openalex.org/C103278499","wikidata":"https://www.wikidata.org/wiki/Q254465","display_name":"Similarity (geometry)","level":3,"score":0.5069475173950195},{"id":"https://openalex.org/C85617194","wikidata":"https://www.wikidata.org/wiki/Q2072794","display_name":"Particle swarm optimization","level":2,"score":0.5068541169166565},{"id":"https://openalex.org/C92835128","wikidata":"https://www.wikidata.org/wiki/Q1277447","display_name":"Hierarchical clustering","level":3,"score":0.5020899772644043},{"id":"https://openalex.org/C94641424","wikidata":"https://www.wikidata.org/wiki/Q5172845","display_name":"Correlation clustering","level":3,"score":0.4813726544380188},{"id":"https://openalex.org/C33704608","wikidata":"https://www.wikidata.org/wiki/Q5014717","display_name":"CURE data clustering algorithm","level":4,"score":0.4564516544342041},{"id":"https://openalex.org/C22648726","wikidata":"https://www.wikidata.org/wiki/Q7523744","display_name":"Single-linkage clustering","level":5,"score":0.4476807713508606},{"id":"https://openalex.org/C104047586","wikidata":"https://www.wikidata.org/wiki/Q5033439","display_name":"Canopy clustering algorithm","level":4,"score":0.4377394914627075},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.4081161916255951},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3653339445590973},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.09737825393676758},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.08008277416229248},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/s10044-018-0680-9","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s10044-018-0680-9","pdf_url":null,"source":{"id":"https://openalex.org/S45497385","display_name":"Pattern Analysis and Applications","issn_l":"1433-7541","issn":["1433-7541","1433-755X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Pattern Analysis and Applications","raw_type":"journal-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":22,"referenced_works":["https://openalex.org/W1200869358","https://openalex.org/W1480276090","https://openalex.org/W1541288193","https://openalex.org/W1560921017","https://openalex.org/W1989174562","https://openalex.org/W2071507457","https://openalex.org/W2102122585","https://openalex.org/W2106223860","https://openalex.org/W2106858839","https://openalex.org/W2116952749","https://openalex.org/W2117006918","https://openalex.org/W2125838338","https://openalex.org/W2140870987","https://openalex.org/W2152195021","https://openalex.org/W2156606946","https://openalex.org/W2167814407","https://openalex.org/W2200090557","https://openalex.org/W3112557664","https://openalex.org/W3214380909","https://openalex.org/W4231339208","https://openalex.org/W4236088841","https://openalex.org/W4245668478"],"related_works":["https://openalex.org/W2559422900","https://openalex.org/W2160785859","https://openalex.org/W3120229345","https://openalex.org/W2103650652","https://openalex.org/W2188840951","https://openalex.org/W2171610853","https://openalex.org/W2360225591","https://openalex.org/W2384052049","https://openalex.org/W4220814143","https://openalex.org/W2087424554"],"abstract_inverted_index":null,"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2023,"cited_by_count":4},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":4},{"year":2020,"cited_by_count":3},{"year":2019,"cited_by_count":2}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
