{"id":"https://openalex.org/W1966455810","doi":"https://doi.org/10.1007/s10015-006-0413-9","title":"Partially interacted phosphorylation/dephosphorylation trees extracted from signaling pathways in cells","display_name":"Partially interacted phosphorylation/dephosphorylation trees extracted from signaling pathways in cells","publication_year":2007,"publication_date":"2007-01-24","ids":{"openalex":"https://openalex.org/W1966455810","doi":"https://doi.org/10.1007/s10015-006-0413-9","mag":"1966455810"},"language":"en","primary_location":{"id":"doi:10.1007/s10015-006-0413-9","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s10015-006-0413-9","pdf_url":null,"source":{"id":"https://openalex.org/S104439334","display_name":"Artificial Life and Robotics","issn_l":"1433-5298","issn":["1433-5298","1614-7456"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Artificial Life and Robotics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5089617877","display_name":"Jian\u2010Qin Liu","orcid":"https://orcid.org/0000-0001-9676-8767"},"institutions":[{"id":"https://openalex.org/I90023481","display_name":"National Institute of Information and Communications Technology","ror":"https://ror.org/016bgq349","country_code":"JP","type":"facility","lineage":["https://openalex.org/I90023481"]}],"countries":["JP"],"is_corresponding":true,"raw_author_name":"Jian-Qin Liu","raw_affiliation_strings":["Kobe Advanced ICT Research Center, National Institute of Information and Communications Technology, 588-2 Iwaoka, Nishi-ku, Kobe, Hyogo, 651-2492, Japan","National Institute of Information and Communications Technology"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Kobe Advanced ICT Research Center, National Institute of Information and Communications Technology, 588-2 Iwaoka, Nishi-ku, Kobe, Hyogo, 651-2492, Japan","institution_ids":["https://openalex.org/I90023481"]},{"raw_affiliation_string":"National Institute of Information and Communications Technology","institution_ids":["https://openalex.org/I90023481"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5064573074","display_name":"Katsunori Shimohara","orcid":"https://orcid.org/0000-0003-3649-7699"},"institutions":[{"id":"https://openalex.org/I133984924","display_name":"Doshisha University","ror":"https://ror.org/01fxdkm29","country_code":"JP","type":"education","lineage":["https://openalex.org/I133984924"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Katsunori Shimohara","raw_affiliation_strings":["Department of Information Systems Design, Doshisha University, Kyoto, Japan","Doshisha university"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Information Systems Design, Doshisha University, Kyoto, Japan","institution_ids":["https://openalex.org/I133984924"]},{"raw_affiliation_string":"Doshisha university","institution_ids":["https://openalex.org/I133984924"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5089617877"],"corresponding_institution_ids":["https://openalex.org/I90023481"],"apc_list":{"value":2990,"currency":"USD","value_usd":2990},"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.06374128,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"11","issue":"1","first_page":"123","last_page":"127"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12946","display_name":"Fractal and DNA sequence analysis","score":0.9902999997138977,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12946","display_name":"Fractal and DNA sequence analysis","score":0.9902999997138977,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12029","display_name":"DNA and Biological Computing","score":0.9894999861717224,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9804999828338623,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/dephosphorylation","display_name":"Dephosphorylation","score":0.982663631439209},{"id":"https://openalex.org/keywords/phosphorylation","display_name":"Phosphorylation","score":0.9120470285415649},{"id":"https://openalex.org/keywords/cell-biology","display_name":"Cell biology","score":0.5083224177360535},{"id":"https://openalex.org/keywords/protein-phosphorylation","display_name":"Protein phosphorylation","score":0.44524165987968445},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.43115657567977905},{"id":"https://openalex.org/keywords/phosphorylation-cascade","display_name":"Phosphorylation cascade","score":0.42497074604034424},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.4117198586463928},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.25461554527282715},{"id":"https://openalex.org/keywords/phosphatase","display_name":"Phosphatase","score":0.12138417363166809},{"id":"https://openalex.org/keywords/protein-kinase-a","display_name":"Protein kinase A","score":0.0769067108631134}],"concepts":[{"id":"https://openalex.org/C181912034","wikidata":"https://www.wikidata.org/wiki/Q1101143","display_name":"Dephosphorylation","level":4,"score":0.982663631439209},{"id":"https://openalex.org/C11960822","wikidata":"https://www.wikidata.org/wiki/Q242736","display_name":"Phosphorylation","level":2,"score":0.9120470285415649},{"id":"https://openalex.org/C95444343","wikidata":"https://www.wikidata.org/wiki/Q7141","display_name":"Cell biology","level":1,"score":0.5083224177360535},{"id":"https://openalex.org/C87325107","wikidata":"https://www.wikidata.org/wiki/Q7251493","display_name":"Protein phosphorylation","level":4,"score":0.44524165987968445},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.43115657567977905},{"id":"https://openalex.org/C104551158","wikidata":"https://www.wikidata.org/wiki/Q7187581","display_name":"Phosphorylation cascade","level":5,"score":0.42497074604034424},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.4117198586463928},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.25461554527282715},{"id":"https://openalex.org/C178666793","wikidata":"https://www.wikidata.org/wiki/Q422476","display_name":"Phosphatase","level":3,"score":0.12138417363166809},{"id":"https://openalex.org/C97029542","wikidata":"https://www.wikidata.org/wiki/Q281417","display_name":"Protein kinase A","level":3,"score":0.0769067108631134}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/s10015-006-0413-9","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s10015-006-0413-9","pdf_url":null,"source":{"id":"https://openalex.org/S104439334","display_name":"Artificial Life and Robotics","issn_l":"1433-5298","issn":["1433-5298","1614-7456"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Artificial Life and Robotics","raw_type":"journal-article"}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.47999998927116394,"display_name":"Zero hunger","id":"https://metadata.un.org/sdg/2"}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":2,"referenced_works":["https://openalex.org/W2106647330","https://openalex.org/W2162049443"],"related_works":["https://openalex.org/W2491608603","https://openalex.org/W3037320846","https://openalex.org/W2127013244","https://openalex.org/W2352214813","https://openalex.org/W2155515046","https://openalex.org/W304798291","https://openalex.org/W2003839957","https://openalex.org/W2057779043","https://openalex.org/W2238473199","https://openalex.org/W4223412920"],"abstract_inverted_index":null,"counts_by_year":[],"updated_date":"2026-07-23T08:03:31.855105","created_date":"2025-10-10T00:00:00"}
