{"id":"https://openalex.org/W2037896692","doi":"https://doi.org/10.1007/s00778-012-0270-1","title":"Approximate regional sequence matching for genomic databases","display_name":"Approximate regional sequence matching for genomic databases","publication_year":2012,"publication_date":"2012-03-17","ids":{"openalex":"https://openalex.org/W2037896692","doi":"https://doi.org/10.1007/s00778-012-0270-1","mag":"2037896692"},"language":"en","primary_location":{"id":"doi:10.1007/s00778-012-0270-1","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s00778-012-0270-1","pdf_url":null,"source":{"id":"https://openalex.org/S78926909","display_name":"The VLDB Journal","issn_l":"0949-877X","issn":["0949-877X","1066-8888"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"The VLDB Journal","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":null,"any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5066709451","display_name":"Thanasis Vergoulis","orcid":"https://orcid.org/0000-0003-0555-4128"},"institutions":[{"id":"https://openalex.org/I174458059","display_name":"National Technical University of Athens","ror":"https://ror.org/03cx6bg69","country_code":"GR","type":"education","lineage":["https://openalex.org/I174458059"]},{"id":"https://openalex.org/I4210156054","display_name":"Athena Research and Innovation Center In Information Communication & Knowledge Technologies","ror":"https://ror.org/0576by029","country_code":"GR","type":"facility","lineage":["https://openalex.org/I4210156054"]}],"countries":["GR"],"is_corresponding":true,"raw_author_name":"Thanasis Vergoulis","raw_affiliation_strings":["NTUA & IMIS, Athena RC, Athens, Greece","NTUA & IMIS, Athena RC, Athens, Greece#TAB#"],"affiliations":[{"raw_affiliation_string":"NTUA & IMIS, Athena RC, Athens, Greece","institution_ids":["https://openalex.org/I174458059","https://openalex.org/I4210156054"]},{"raw_affiliation_string":"NTUA & IMIS, Athena RC, Athens, Greece#TAB#","institution_ids":["https://openalex.org/I174458059","https://openalex.org/I4210156054"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5042574890","display_name":"Theodore Dalamagas","orcid":"https://orcid.org/0000-0002-5002-7901"},"institutions":[{"id":"https://openalex.org/I4210156054","display_name":"Athena Research and Innovation Center In Information Communication & Knowledge Technologies","ror":"https://ror.org/0576by029","country_code":"GR","type":"facility","lineage":["https://openalex.org/I4210156054"]}],"countries":["GR"],"is_corresponding":false,"raw_author_name":"Theodore Dalamagas","raw_affiliation_strings":["IMIS, Athena RC, Athens, Greece"],"affiliations":[{"raw_affiliation_string":"IMIS, Athena RC, Athens, Greece","institution_ids":["https://openalex.org/I4210156054"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5090860653","display_name":"Dimitris Sacharidis","orcid":"https://orcid.org/0000-0001-5022-1483"},"institutions":[{"id":"https://openalex.org/I4210156054","display_name":"Athena Research and Innovation Center In Information Communication & Knowledge Technologies","ror":"https://ror.org/0576by029","country_code":"GR","type":"facility","lineage":["https://openalex.org/I4210156054"]}],"countries":["GR"],"is_corresponding":false,"raw_author_name":"Dimitris Sacharidis","raw_affiliation_strings":["IMIS, Athena RC, Athens, Greece"],"affiliations":[{"raw_affiliation_string":"IMIS, Athena RC, Athens, Greece","institution_ids":["https://openalex.org/I4210156054"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5020449921","display_name":"Timos Sellis","orcid":"https://orcid.org/0000-0002-9067-5639"},"institutions":[{"id":"https://openalex.org/I4210156054","display_name":"Athena Research and Innovation Center In Information Communication & Knowledge Technologies","ror":"https://ror.org/0576by029","country_code":"GR","type":"facility","lineage":["https://openalex.org/I4210156054"]},{"id":"https://openalex.org/I174458059","display_name":"National Technical University of Athens","ror":"https://ror.org/03cx6bg69","country_code":"GR","type":"education","lineage":["https://openalex.org/I174458059"]}],"countries":["GR"],"is_corresponding":false,"raw_author_name":"Timos Sellis","raw_affiliation_strings":["NTUA & IMIS, Athena RC, Athens, Greece","NTUA & IMIS, Athena RC, Athens, Greece#TAB#"],"affiliations":[{"raw_affiliation_string":"NTUA & IMIS, Athena RC, Athens, Greece","institution_ids":["https://openalex.org/I174458059","https://openalex.org/I4210156054"]},{"raw_affiliation_string":"NTUA & IMIS, Athena RC, Athens, Greece#TAB#","institution_ids":["https://openalex.org/I174458059","https://openalex.org/I4210156054"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5066709451"],"corresponding_institution_ids":["https://openalex.org/I174458059","https://openalex.org/I4210156054"],"apc_list":{"value":2290,"currency":"EUR","value_usd":2890},"apc_paid":null,"fwci":1.326,"has_fulltext":false,"cited_by_count":3,"citation_normalized_percentile":{"value":0.83616658,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":96},"biblio":{"volume":"21","issue":"6","first_page":"779","last_page":"795"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9980999827384949,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9879999756813049,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.829235315322876},{"id":"https://openalex.org/keywords/sequence-database","display_name":"Sequence database","score":0.6615343689918518},{"id":"https://openalex.org/keywords/matching","display_name":"Matching (statistics)","score":0.6305122971534729},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5993140935897827},{"id":"https://openalex.org/keywords/pattern-matching","display_name":"Pattern matching","score":0.5874395370483398},{"id":"https://openalex.org/keywords/core","display_name":"Core (optical fiber)","score":0.4349740743637085},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.352778822183609},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.205075204372406},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.17376166582107544},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.14159688353538513},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.09304216504096985},{"id":"https://openalex.org/keywords/statistics","display_name":"Statistics","score":0.06353327631950378}],"concepts":[{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.829235315322876},{"id":"https://openalex.org/C41584329","wikidata":"https://www.wikidata.org/wiki/Q175902","display_name":"Sequence database","level":3,"score":0.6615343689918518},{"id":"https://openalex.org/C165064840","wikidata":"https://www.wikidata.org/wiki/Q1321061","display_name":"Matching (statistics)","level":2,"score":0.6305122971534729},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5993140935897827},{"id":"https://openalex.org/C68859911","wikidata":"https://www.wikidata.org/wiki/Q1503724","display_name":"Pattern matching","level":2,"score":0.5874395370483398},{"id":"https://openalex.org/C2164484","wikidata":"https://www.wikidata.org/wiki/Q5170150","display_name":"Core (optical fiber)","level":2,"score":0.4349740743637085},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.352778822183609},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.205075204372406},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.17376166582107544},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.14159688353538513},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.09304216504096985},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.06353327631950378},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C76155785","wikidata":"https://www.wikidata.org/wiki/Q418","display_name":"Telecommunications","level":1,"score":0.0}],"mesh":[],"locations_count":5,"locations":[{"id":"doi:10.1007/s00778-012-0270-1","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s00778-012-0270-1","pdf_url":null,"source":{"id":"https://openalex.org/S78926909","display_name":"The VLDB Journal","issn_l":"0949-877X","issn":["0949-877X","1066-8888"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"The VLDB Journal","raw_type":"journal-article"},{"id":"pmh:oai:researchbank.rmit.edu.au:rmit:18422","is_oa":false,"landing_page_url":"http://researchbank.rmit.edu.au/view/rmit:18422","pdf_url":null,"source":{"id":"https://openalex.org/S4306402074","display_name":"RMIT Research Repository (RMIT University Library)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I82951845","host_organization_name":"RMIT University","host_organization_lineage":["https://openalex.org/I82951845"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Journal Article"},{"id":"pmh:oai:alma.61RMIT_INST:11246554260001341","is_oa":false,"landing_page_url":"http://doi.org/10.1007/s00778-012-0270-1","pdf_url":null,"source":{"id":"https://openalex.org/S4306402074","display_name":"RMIT Research Repository (RMIT University Library)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I82951845","host_organization_name":"RMIT University","host_organization_lineage":["https://openalex.org/I82951845"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"text"},{"id":"pmh:oai:figshare.com:article/27454971","is_oa":true,"landing_page_url":null,"pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"},{"id":"pmh:oai:researchbank.swinburne.edu.au:824cd65f-a711-4bc5-ba30-24494f234ed7/1","is_oa":false,"landing_page_url":"http://hdl.handle.net/1959.3/412985","pdf_url":null,"source":{"id":"https://openalex.org/S4306401157","display_name":"Swinburne Research Bank (Swinburne University of Technology)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I57093077","host_organization_name":"Swinburne University of Technology","host_organization_lineage":["https://openalex.org/I57093077"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"VLDB Journal, Vol. 21, no. 6 (Mar 2012), pp. 779-795","raw_type":""}],"best_oa_location":{"id":"pmh:oai:figshare.com:article/27454971","is_oa":true,"landing_page_url":null,"pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":33,"referenced_works":["https://openalex.org/W178414959","https://openalex.org/W1484435918","https://openalex.org/W1501400124","https://openalex.org/W1520663999","https://openalex.org/W1529203176","https://openalex.org/W1647671624","https://openalex.org/W1964638897","https://openalex.org/W1987426253","https://openalex.org/W1990061958","https://openalex.org/W1990413869","https://openalex.org/W2001496424","https://openalex.org/W2011280787","https://openalex.org/W2012739991","https://openalex.org/W2015292449","https://openalex.org/W2016219933","https://openalex.org/W2029195137","https://openalex.org/W2047203512","https://openalex.org/W2055043387","https://openalex.org/W2055666215","https://openalex.org/W2057887529","https://openalex.org/W2062112417","https://openalex.org/W2074231493","https://openalex.org/W2087064593","https://openalex.org/W2108235229","https://openalex.org/W2109136664","https://openalex.org/W2112099725","https://openalex.org/W2115321097","https://openalex.org/W2128219894","https://openalex.org/W2144990395","https://openalex.org/W2158714788","https://openalex.org/W2168459716","https://openalex.org/W2169353508","https://openalex.org/W2610179052"],"related_works":["https://openalex.org/W3158538495","https://openalex.org/W3121501642","https://openalex.org/W2943461603","https://openalex.org/W3210429500","https://openalex.org/W3217252310","https://openalex.org/W4286894112","https://openalex.org/W2037896692","https://openalex.org/W2136066520","https://openalex.org/W2354598492","https://openalex.org/W118115531"],"abstract_inverted_index":null,"counts_by_year":[{"year":2015,"cited_by_count":1},{"year":2012,"cited_by_count":2}],"updated_date":"2026-04-04T16:13:02.066488","created_date":"2025-10-10T00:00:00"}
