{"id":"https://openalex.org/W2134134460","doi":"https://doi.org/10.1007/s00778-005-0153-9","title":"Rule-based workflow management for bioinformatics","display_name":"Rule-based workflow management for bioinformatics","publication_year":2005,"publication_date":"2005-09-01","ids":{"openalex":"https://openalex.org/W2134134460","doi":"https://doi.org/10.1007/s00778-005-0153-9","mag":"2134134460"},"language":"en","primary_location":{"id":"doi:10.1007/s00778-005-0153-9","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s00778-005-0153-9","pdf_url":null,"source":{"id":"https://openalex.org/S78926909","display_name":"The VLDB Journal","issn_l":"0949-877X","issn":["0949-877X","1066-8888"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"The VLDB Journal","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5037772770","display_name":"John S. Conery","orcid":null},"institutions":[{"id":"https://openalex.org/I181233156","display_name":"University of Oregon","ror":"https://ror.org/0293rh119","country_code":"US","type":"education","lineage":["https://openalex.org/I181233156"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"John S. Conery","raw_affiliation_strings":["Department of Computer and Information Science, University of Oregon, Eugene, OR, 97403, USA","Department of Computer & Information Science, University of Oregon, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer and Information Science, University of Oregon, Eugene, OR, 97403, USA","institution_ids":["https://openalex.org/I181233156"]},{"raw_affiliation_string":"Department of Computer & Information Science, University of Oregon, USA","institution_ids":["https://openalex.org/I181233156"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5061745861","display_name":"Julian Catchen","orcid":"https://orcid.org/0000-0002-4798-660X"},"institutions":[{"id":"https://openalex.org/I181233156","display_name":"University of Oregon","ror":"https://ror.org/0293rh119","country_code":"US","type":"education","lineage":["https://openalex.org/I181233156"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Julian M. Catchen","raw_affiliation_strings":["Department of Computer and Information Science, University of Oregon, Eugene, OR, 97403, USA","Department of Computer & Information Science, University of Oregon, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer and Information Science, University of Oregon, Eugene, OR, 97403, USA","institution_ids":["https://openalex.org/I181233156"]},{"raw_affiliation_string":"Department of Computer & Information Science, University of Oregon, USA","institution_ids":["https://openalex.org/I181233156"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5053297258","display_name":"Michael Lynch","orcid":"https://orcid.org/0000-0002-1653-0642"},"institutions":[{"id":"https://openalex.org/I4210119109","display_name":"Indiana University Bloomington","ror":"https://ror.org/02k40bc56","country_code":"US","type":"education","lineage":["https://openalex.org/I4210119109","https://openalex.org/I592451"]},{"id":"https://openalex.org/I592451","display_name":"Indiana University","ror":"https://ror.org/01kg8sb98","country_code":"US","type":"education","lineage":["https://openalex.org/I592451"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Michael Lynch","raw_affiliation_strings":["Department of Biology, Indiana University, Bloomington, IN, 47405-3700, USA","Department of Biology, Indiana University, USA#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biology, Indiana University, Bloomington, IN, 47405-3700, USA","institution_ids":["https://openalex.org/I4210119109"]},{"raw_affiliation_string":"Department of Biology, Indiana University, USA#TAB#","institution_ids":["https://openalex.org/I592451"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5037772770"],"corresponding_institution_ids":["https://openalex.org/I181233156"],"apc_list":{"value":2290,"currency":"EUR","value_usd":2890},"apc_paid":null,"fwci":4.1358,"has_fulltext":false,"cited_by_count":18,"citation_normalized_percentile":{"value":0.94466809,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":"14","issue":"3","first_page":"318","last_page":"329"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},"topics":[{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T10715","display_name":"Distributed and Parallel Computing Systems","score":0.9948999881744385,"subfield":{"id":"https://openalex.org/subfields/1705","display_name":"Computer Networks and Communications"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.9790999889373779,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/workflow","display_name":"Workflow","score":0.908500075340271},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7721765041351318},{"id":"https://openalex.org/keywords/workflow-management-system","display_name":"Workflow management system","score":0.7064424753189087},{"id":"https://openalex.org/keywords/workflow-technology","display_name":"Workflow technology","score":0.6762297749519348},{"id":"https://openalex.org/keywords/workflow-engine","display_name":"Workflow engine","score":0.6552998423576355},{"id":"https://openalex.org/keywords/software-engineering","display_name":"Software engineering","score":0.61374831199646},{"id":"https://openalex.org/keywords/windows-workflow-foundation","display_name":"Windows Workflow Foundation","score":0.5254860520362854},{"id":"https://openalex.org/keywords/xpdl","display_name":"XPDL","score":0.5064870119094849},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.4421866834163666},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.37376153469085693},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.33936992287635803},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.30975645780563354}],"concepts":[{"id":"https://openalex.org/C177212765","wikidata":"https://www.wikidata.org/wiki/Q627335","display_name":"Workflow","level":2,"score":0.908500075340271},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7721765041351318},{"id":"https://openalex.org/C140824633","wikidata":"https://www.wikidata.org/wiki/Q2808660","display_name":"Workflow management system","level":3,"score":0.7064424753189087},{"id":"https://openalex.org/C19612761","wikidata":"https://www.wikidata.org/wiki/Q8034836","display_name":"Workflow technology","level":3,"score":0.6762297749519348},{"id":"https://openalex.org/C188220564","wikidata":"https://www.wikidata.org/wiki/Q3325097","display_name":"Workflow engine","level":3,"score":0.6552998423576355},{"id":"https://openalex.org/C115903868","wikidata":"https://www.wikidata.org/wiki/Q80993","display_name":"Software engineering","level":1,"score":0.61374831199646},{"id":"https://openalex.org/C163888707","wikidata":"https://www.wikidata.org/wiki/Q1154450","display_name":"Windows Workflow Foundation","level":4,"score":0.5254860520362854},{"id":"https://openalex.org/C130536060","wikidata":"https://www.wikidata.org/wiki/Q592375","display_name":"XPDL","level":4,"score":0.5064870119094849},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.4421866834163666},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.37376153469085693},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.33936992287635803},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.30975645780563354}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/s00778-005-0153-9","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s00778-005-0153-9","pdf_url":null,"source":{"id":"https://openalex.org/S78926909","display_name":"The VLDB Journal","issn_l":"0949-877X","issn":["0949-877X","1066-8888"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"The VLDB Journal","raw_type":"journal-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320320847","display_name":"Science Foundation Ireland","ror":"https://ror.org/0271asj38"},{"id":"https://openalex.org/F4320320864","display_name":"Trinity College Dublin","ror":"https://ror.org/02tyrky19"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":42,"referenced_works":["https://openalex.org/W83447915","https://openalex.org/W205234667","https://openalex.org/W1488560674","https://openalex.org/W1520779252","https://openalex.org/W1555095622","https://openalex.org/W1564625264","https://openalex.org/W1592347886","https://openalex.org/W1751031346","https://openalex.org/W1972017488","https://openalex.org/W1988431525","https://openalex.org/W1998838989","https://openalex.org/W2015292449","https://openalex.org/W2019591778","https://openalex.org/W2020260970","https://openalex.org/W2070274396","https://openalex.org/W2072445657","https://openalex.org/W2085629257","https://openalex.org/W2087122799","https://openalex.org/W2091257550","https://openalex.org/W2095724872","https://openalex.org/W2104306559","https://openalex.org/W2106882534","https://openalex.org/W2117495487","https://openalex.org/W2119632499","https://openalex.org/W2123576887","https://openalex.org/W2128374023","https://openalex.org/W2129066902","https://openalex.org/W2144296776","https://openalex.org/W2150751165","https://openalex.org/W2158714788","https://openalex.org/W2161444534","https://openalex.org/W2163058466","https://openalex.org/W2168103533","https://openalex.org/W2170185828","https://openalex.org/W2181763195","https://openalex.org/W2780466810","https://openalex.org/W2911625174","https://openalex.org/W3124530199","https://openalex.org/W4213319185","https://openalex.org/W4233522539","https://openalex.org/W4256566759","https://openalex.org/W4297845870"],"related_works":["https://openalex.org/W2102291915","https://openalex.org/W2136769452","https://openalex.org/W2352513524","https://openalex.org/W2107464366","https://openalex.org/W2169936168","https://openalex.org/W2389230787","https://openalex.org/W1948034404","https://openalex.org/W4232825510","https://openalex.org/W2137920171","https://openalex.org/W4210712782"],"abstract_inverted_index":null,"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2021,"cited_by_count":2},{"year":2020,"cited_by_count":1},{"year":2013,"cited_by_count":1},{"year":2012,"cited_by_count":2}],"updated_date":"2026-06-19T17:40:00.097472","created_date":"2025-10-10T00:00:00"}
