{"id":"https://openalex.org/W4410136055","doi":"https://doi.org/10.1007/s00521-025-11217-2","title":"Deep learning for predicting essential proteins using topological features and gene ontology","display_name":"Deep learning for predicting essential proteins using topological features and gene ontology","publication_year":2025,"publication_date":"2025-05-06","ids":{"openalex":"https://openalex.org/W4410136055","doi":"https://doi.org/10.1007/s00521-025-11217-2"},"language":"en","primary_location":{"id":"doi:10.1007/s00521-025-11217-2","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s00521-025-11217-2","pdf_url":null,"source":{"id":"https://openalex.org/S147897268","display_name":"Neural Computing and Applications","issn_l":"0941-0643","issn":["0941-0643","1433-3058"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Neural Computing and Applications","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100714274","display_name":"Md. Shahidul Islam","orcid":"https://orcid.org/0000-0003-1159-8688"},"institutions":[{"id":"https://openalex.org/I4210131323","display_name":"University of Asia Pacific","ror":"https://ror.org/03dk4hf38","country_code":"BD","type":"education","lineage":["https://openalex.org/I4210131323"]}],"countries":["BD"],"is_corresponding":true,"raw_author_name":"Md. Shahidul Islam","raw_affiliation_strings":["Department of Computer Science and Engineering, University of Asia Pacific, 74/A, Dhaka, 1205, Bangladesh"],"raw_orcid":"https://orcid.org/0000-0003-1159-8688","affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, University of Asia Pacific, 74/A, Dhaka, 1205, Bangladesh","institution_ids":["https://openalex.org/I4210131323"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101575633","display_name":"Md. Rafiqul Islam","orcid":"https://orcid.org/0000-0002-0777-6747"},"institutions":[{"id":"https://openalex.org/I103434671","display_name":"American International University-Bangladesh","ror":"https://ror.org/02j8ga255","country_code":"BD","type":"education","lineage":["https://openalex.org/I103434671"]}],"countries":["BD"],"is_corresponding":false,"raw_author_name":"Md. Rafiqul Islam","raw_affiliation_strings":["Department of Computer Science, American International University Bangladesh, 408/1, Dhaka, 1229, Bangladesh"],"raw_orcid":"https://orcid.org/0000-0002-0777-6747","affiliations":[{"raw_affiliation_string":"Department of Computer Science, American International University Bangladesh, 408/1, Dhaka, 1229, Bangladesh","institution_ids":["https://openalex.org/I103434671"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5113332022","display_name":"Durjoy Mistry","orcid":"https://orcid.org/0009-0003-8753-3714"},"institutions":[{"id":"https://openalex.org/I4210131323","display_name":"University of Asia Pacific","ror":"https://ror.org/03dk4hf38","country_code":"BD","type":"education","lineage":["https://openalex.org/I4210131323"]}],"countries":["BD"],"is_corresponding":false,"raw_author_name":"Durjoy Mistry","raw_affiliation_strings":["Department of Computer Science and Engineering, University of Asia Pacific, 74/A, Dhaka, 1205, Bangladesh"],"raw_orcid":"https://orcid.org/0009-0003-8753-3714","affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, University of Asia Pacific, 74/A, Dhaka, 1205, Bangladesh","institution_ids":["https://openalex.org/I4210131323"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5100714274"],"corresponding_institution_ids":["https://openalex.org/I4210131323"],"apc_list":{"value":2390,"currency":"EUR","value_usd":2990},"apc_paid":null,"fwci":1.4227,"has_fulltext":false,"cited_by_count":2,"citation_normalized_percentile":{"value":0.80629434,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":95,"max":96},"biblio":{"volume":"37","issue":"19","first_page":"13965","last_page":"13980"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9980000257492065,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computational-science-and-engineering","display_name":"Computational Science and Engineering","score":0.738161027431488},{"id":"https://openalex.org/keywords/gene-ontology","display_name":"Gene ontology","score":0.6432586312294006},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5999698042869568},{"id":"https://openalex.org/keywords/ontology","display_name":"Ontology","score":0.5473246574401855},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4255499839782715},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.4197717607021332},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.40968847274780273},{"id":"https://openalex.org/keywords/topology","display_name":"Topology (electrical circuits)","score":0.365800678730011},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.3240498900413513},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.24320966005325317},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.1707296073436737},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.1299954354763031},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.12291303277015686}],"concepts":[{"id":"https://openalex.org/C68597687","wikidata":"https://www.wikidata.org/wiki/Q362601","display_name":"Computational Science and Engineering","level":2,"score":0.738161027431488},{"id":"https://openalex.org/C2987395477","wikidata":"https://www.wikidata.org/wiki/Q135085","display_name":"Gene ontology","level":4,"score":0.6432586312294006},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5999698042869568},{"id":"https://openalex.org/C25810664","wikidata":"https://www.wikidata.org/wiki/Q44325","display_name":"Ontology","level":2,"score":0.5473246574401855},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4255499839782715},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.4197717607021332},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.40968847274780273},{"id":"https://openalex.org/C184720557","wikidata":"https://www.wikidata.org/wiki/Q7825049","display_name":"Topology (electrical circuits)","level":2,"score":0.365800678730011},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.3240498900413513},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.24320966005325317},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.1707296073436737},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.1299954354763031},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.12291303277015686},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C114614502","wikidata":"https://www.wikidata.org/wiki/Q76592","display_name":"Combinatorics","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/s00521-025-11217-2","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s00521-025-11217-2","pdf_url":null,"source":{"id":"https://openalex.org/S147897268","display_name":"Neural Computing and Applications","issn_l":"0941-0643","issn":["0941-0643","1433-3058"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Neural Computing and Applications","raw_type":"journal-article"}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.5,"display_name":"Zero hunger","id":"https://metadata.un.org/sdg/2"}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":39,"referenced_works":["https://openalex.org/W1977186059","https://openalex.org/W2032289031","https://openalex.org/W2037697827","https://openalex.org/W2038492783","https://openalex.org/W2042459594","https://openalex.org/W2060816398","https://openalex.org/W2065304353","https://openalex.org/W2068705129","https://openalex.org/W2078178981","https://openalex.org/W2084619201","https://openalex.org/W2115550821","https://openalex.org/W2120219476","https://openalex.org/W2124540200","https://openalex.org/W2130790725","https://openalex.org/W2132022337","https://openalex.org/W2132582966","https://openalex.org/W2142437744","https://openalex.org/W2148143831","https://openalex.org/W2152195021","https://openalex.org/W2155019453","https://openalex.org/W2163485494","https://openalex.org/W2167869241","https://openalex.org/W2606042658","https://openalex.org/W2739999456","https://openalex.org/W2740778459","https://openalex.org/W2769309311","https://openalex.org/W2800788706","https://openalex.org/W2811144380","https://openalex.org/W2885091354","https://openalex.org/W2908485946","https://openalex.org/W2962756421","https://openalex.org/W2991321419","https://openalex.org/W3094213757","https://openalex.org/W3157699413","https://openalex.org/W3174740339","https://openalex.org/W4236956086","https://openalex.org/W4289766530","https://openalex.org/W4313476568","https://openalex.org/W4392751933"],"related_works":["https://openalex.org/W2003333417","https://openalex.org/W4393232657","https://openalex.org/W4390638272","https://openalex.org/W2378862226","https://openalex.org/W118236634","https://openalex.org/W2355326633","https://openalex.org/W2804669904","https://openalex.org/W4408313902","https://openalex.org/W2149777447","https://openalex.org/W2794019507"],"abstract_inverted_index":null,"counts_by_year":[{"year":2025,"cited_by_count":2}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
