{"id":"https://openalex.org/W2132541530","doi":"https://doi.org/10.1007/s00500-005-0488-6","title":"Threading with environment-specific score by artificial neural networks","display_name":"Threading with environment-specific score by artificial neural networks","publication_year":2005,"publication_date":"2005-05-10","ids":{"openalex":"https://openalex.org/W2132541530","doi":"https://doi.org/10.1007/s00500-005-0488-6","mag":"2132541530"},"language":"en","primary_location":{"id":"doi:10.1007/s00500-005-0488-6","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s00500-005-0488-6","pdf_url":null,"source":{"id":"https://openalex.org/S65753830","display_name":"Soft Computing","issn_l":"1432-7643","issn":["1432-7643","1433-7479"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Soft Computing","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5101452820","display_name":"Nan Jiang","orcid":"https://orcid.org/0000-0001-6863-2897"},"institutions":[{"id":"https://openalex.org/I4210127577","display_name":"Middlesex University","ror":"https://ror.org/030ypay32","country_code":"MT","type":"education","lineage":["https://openalex.org/I4210127577"]},{"id":"https://openalex.org/I60488453","display_name":"Middlesex University","ror":"https://ror.org/01rv4p989","country_code":"GB","type":"education","lineage":["https://openalex.org/I60488453"]}],"countries":["GB","MT"],"is_corresponding":true,"raw_author_name":"N. Jiang","raw_affiliation_strings":["School of Computing Science, Middlesex University, The Burroughs, Hendon, NW4 4BT, London","School of Computing Science, Middlesex University, The Burroughs, NW4 4BT, London, Hendon"],"affiliations":[{"raw_affiliation_string":"School of Computing Science, Middlesex University, The Burroughs, Hendon, NW4 4BT, London","institution_ids":["https://openalex.org/I60488453","https://openalex.org/I4210127577"]},{"raw_affiliation_string":"School of Computing Science, Middlesex University, The Burroughs, NW4 4BT, London, Hendon","institution_ids":["https://openalex.org/I60488453"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5070344788","display_name":"W. XinyuWu","orcid":null},"institutions":[{"id":"https://openalex.org/I60488453","display_name":"Middlesex University","ror":"https://ror.org/01rv4p989","country_code":"GB","type":"education","lineage":["https://openalex.org/I60488453"]},{"id":"https://openalex.org/I4210127577","display_name":"Middlesex University","ror":"https://ror.org/030ypay32","country_code":"MT","type":"education","lineage":["https://openalex.org/I4210127577"]}],"countries":["GB","MT"],"is_corresponding":false,"raw_author_name":"W. XinyuWu","raw_affiliation_strings":["School of Computing Science, Middlesex University, The Burroughs, Hendon, NW4 4BT, London","School of Computing Science, Middlesex University, The Burroughs, NW4 4BT, London, Hendon"],"affiliations":[{"raw_affiliation_string":"School of Computing Science, Middlesex University, The Burroughs, Hendon, NW4 4BT, London","institution_ids":["https://openalex.org/I60488453","https://openalex.org/I4210127577"]},{"raw_affiliation_string":"School of Computing Science, Middlesex University, The Burroughs, NW4 4BT, London, Hendon","institution_ids":["https://openalex.org/I60488453"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5056170868","display_name":"Ian Mitchell","orcid":"https://orcid.org/0000-0002-3882-9127"},"institutions":[{"id":"https://openalex.org/I4210127577","display_name":"Middlesex University","ror":"https://ror.org/030ypay32","country_code":"MT","type":"education","lineage":["https://openalex.org/I4210127577"]},{"id":"https://openalex.org/I60488453","display_name":"Middlesex University","ror":"https://ror.org/01rv4p989","country_code":"GB","type":"education","lineage":["https://openalex.org/I60488453"]}],"countries":["GB","MT"],"is_corresponding":false,"raw_author_name":"I. Mitchell","raw_affiliation_strings":["School of Computing Science, Middlesex University, The Burroughs, Hendon, NW4 4BT, London","School of Computing Science, Middlesex University, The Burroughs, NW4 4BT, London, Hendon"],"affiliations":[{"raw_affiliation_string":"School of Computing Science, Middlesex University, The Burroughs, Hendon, NW4 4BT, London","institution_ids":["https://openalex.org/I60488453","https://openalex.org/I4210127577"]},{"raw_affiliation_string":"School of Computing Science, Middlesex University, The Burroughs, NW4 4BT, London, Hendon","institution_ids":["https://openalex.org/I60488453"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5101452820"],"corresponding_institution_ids":["https://openalex.org/I4210127577","https://openalex.org/I60488453"],"apc_list":{"value":2390,"currency":"EUR","value_usd":2990},"apc_paid":null,"fwci":0.2517,"has_fulltext":false,"cited_by_count":2,"citation_normalized_percentile":{"value":0.56588398,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"10","issue":"4","first_page":"305","last_page":"314"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9990000128746033,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9990000128746033,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10260","display_name":"Software Engineering Research","score":0.9889000058174133,"subfield":{"id":"https://openalex.org/subfields/1710","display_name":"Information Systems"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11975","display_name":"Evolutionary Algorithms and Applications","score":0.9889000058174133,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/threading","display_name":"Threading (protein sequence)","score":0.9339650869369507},{"id":"https://openalex.org/keywords/decoy","display_name":"Decoy","score":0.815511167049408},{"id":"https://openalex.org/keywords/protein-structure-prediction","display_name":"Protein structure prediction","score":0.7705352306365967},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5911514759063721},{"id":"https://openalex.org/keywords/artificial-neural-network","display_name":"Artificial neural network","score":0.5567474365234375},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.4976964294910431},{"id":"https://openalex.org/keywords/homology-modeling","display_name":"Homology modeling","score":0.472420334815979},{"id":"https://openalex.org/keywords/protein-structure","display_name":"Protein structure","score":0.43175452947616577},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.37031567096710205},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.34384632110595703},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.3331340551376343},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.19608807563781738},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.09916123747825623}],"concepts":[{"id":"https://openalex.org/C200307862","wikidata":"https://www.wikidata.org/wiki/Q7797175","display_name":"Threading (protein sequence)","level":3,"score":0.9339650869369507},{"id":"https://openalex.org/C2779179475","wikidata":"https://www.wikidata.org/wiki/Q3545649","display_name":"Decoy","level":3,"score":0.815511167049408},{"id":"https://openalex.org/C18051474","wikidata":"https://www.wikidata.org/wiki/Q899656","display_name":"Protein structure prediction","level":3,"score":0.7705352306365967},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5911514759063721},{"id":"https://openalex.org/C50644808","wikidata":"https://www.wikidata.org/wiki/Q192776","display_name":"Artificial neural network","level":2,"score":0.5567474365234375},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.4976964294910431},{"id":"https://openalex.org/C169627665","wikidata":"https://www.wikidata.org/wiki/Q5767913","display_name":"Homology modeling","level":3,"score":0.472420334815979},{"id":"https://openalex.org/C47701112","wikidata":"https://www.wikidata.org/wiki/Q735188","display_name":"Protein structure","level":2,"score":0.43175452947616577},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.37031567096710205},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.34384632110595703},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.3331340551376343},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.19608807563781738},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.09916123747825623},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C181199279","wikidata":"https://www.wikidata.org/wiki/Q8047","display_name":"Enzyme","level":2,"score":0.0},{"id":"https://openalex.org/C170493617","wikidata":"https://www.wikidata.org/wiki/Q208467","display_name":"Receptor","level":2,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/s00500-005-0488-6","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s00500-005-0488-6","pdf_url":null,"source":{"id":"https://openalex.org/S65753830","display_name":"Soft Computing","issn_l":"1432-7643","issn":["1432-7643","1433-7479"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Soft Computing","raw_type":"journal-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":43,"referenced_works":["https://openalex.org/W1516459493","https://openalex.org/W1966041739","https://openalex.org/W1974885083","https://openalex.org/W1979147581","https://openalex.org/W1980791071","https://openalex.org/W1986640734","https://openalex.org/W1999201479","https://openalex.org/W2011495938","https://openalex.org/W2016569808","https://openalex.org/W2037928576","https://openalex.org/W2038335203","https://openalex.org/W2040823078","https://openalex.org/W2041966417","https://openalex.org/W2047289990","https://openalex.org/W2076514152","https://openalex.org/W2079673685","https://openalex.org/W2082752253","https://openalex.org/W2085277871","https://openalex.org/W2095307830","https://openalex.org/W2097651746","https://openalex.org/W2103496339","https://openalex.org/W2107432340","https://openalex.org/W2108067237","https://openalex.org/W2121876872","https://openalex.org/W2122520496","https://openalex.org/W2125677968","https://openalex.org/W2130479394","https://openalex.org/W2131655958","https://openalex.org/W2136739161","https://openalex.org/W2137345862","https://openalex.org/W2137736208","https://openalex.org/W2142210548","https://openalex.org/W2143288492","https://openalex.org/W2144483796","https://openalex.org/W2147059525","https://openalex.org/W2154106236","https://openalex.org/W2154712851","https://openalex.org/W2155480785","https://openalex.org/W2157825442","https://openalex.org/W2161337380","https://openalex.org/W2161776897","https://openalex.org/W2171335714","https://openalex.org/W4246356731"],"related_works":["https://openalex.org/W2380350064","https://openalex.org/W2253761889","https://openalex.org/W1741740882","https://openalex.org/W2136856901","https://openalex.org/W2181585194","https://openalex.org/W3149404221","https://openalex.org/W2043066834","https://openalex.org/W4311623193","https://openalex.org/W2802527233","https://openalex.org/W3215498386"],"abstract_inverted_index":null,"counts_by_year":[],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
