{"id":"https://openalex.org/W1812548859","doi":"https://doi.org/10.1007/s00453-016-0165-4","title":"An External-Memory Algorithm for String Graph Construction","display_name":"An External-Memory Algorithm for String Graph Construction","publication_year":2016,"publication_date":"2016-05-31","ids":{"openalex":"https://openalex.org/W1812548859","doi":"https://doi.org/10.1007/s00453-016-0165-4","mag":"1812548859"},"language":"en","primary_location":{"id":"doi:10.1007/s00453-016-0165-4","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s00453-016-0165-4","pdf_url":null,"source":{"id":"https://openalex.org/S89324355","display_name":"Algorithmica","issn_l":"0178-4617","issn":["0178-4617","1432-0541"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Algorithmica","raw_type":"journal-article"},"type":"article","indexed_in":["arxiv","crossref","datacite"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://arxiv.org/pdf/1405.7520","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5038691764","display_name":"Paola Bonizzoni","orcid":"https://orcid.org/0000-0001-7289-4988"},"institutions":[{"id":"https://openalex.org/I66752286","display_name":"University of Milano-Bicocca","ror":"https://ror.org/01ynf4891","country_code":"IT","type":"education","lineage":["https://openalex.org/I66752286"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Paola Bonizzoni","raw_affiliation_strings":["DISCo, Universit\u00e0 degli Studi di Milano-Bicocca, Milan, Italy","DISCo, Universit\u00e0 degli Studi di Milano\u2013Bicocca, Milan, Italy"],"raw_orcid":"https://orcid.org/0000-0001-7289-4988","affiliations":[{"raw_affiliation_string":"DISCo, Universit\u00e0 degli Studi di Milano-Bicocca, Milan, Italy","institution_ids":["https://openalex.org/I66752286"]},{"raw_affiliation_string":"DISCo, Universit\u00e0 degli Studi di Milano\u2013Bicocca, Milan, Italy","institution_ids":["https://openalex.org/I66752286"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Gianluca Della Vedova","orcid":"https://orcid.org/0000-0003-4032-8177"},"institutions":[{"id":"https://openalex.org/I66752286","display_name":"University of Milano-Bicocca","ror":"https://ror.org/01ynf4891","country_code":"IT","type":"education","lineage":["https://openalex.org/I66752286"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Gianluca Della Vedova","raw_affiliation_strings":["DISCo, Universit\u00e0 degli Studi di Milano-Bicocca, Milan, Italy","DISCo, Universit\u00e0 degli Studi di Milano\u2013Bicocca, Milan, Italy"],"raw_orcid":"https://orcid.org/0000-0003-4032-8177","affiliations":[{"raw_affiliation_string":"DISCo, Universit\u00e0 degli Studi di Milano-Bicocca, Milan, Italy","institution_ids":["https://openalex.org/I66752286"]},{"raw_affiliation_string":"DISCo, Universit\u00e0 degli Studi di Milano\u2013Bicocca, Milan, Italy","institution_ids":["https://openalex.org/I66752286"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5079127373","display_name":"Yuri Pirola","orcid":"https://orcid.org/0000-0002-8479-7592"},"institutions":[{"id":"https://openalex.org/I66752286","display_name":"University of Milano-Bicocca","ror":"https://ror.org/01ynf4891","country_code":"IT","type":"education","lineage":["https://openalex.org/I66752286"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Yuri Pirola","raw_affiliation_strings":["DISCo, Universit\u00e0 degli Studi di Milano-Bicocca, Milan, Italy","DISCo, Universit\u00e0 degli Studi di Milano\u2013Bicocca, Milan, Italy"],"raw_orcid":"https://orcid.org/0000-0002-8479-7592","affiliations":[{"raw_affiliation_string":"DISCo, Universit\u00e0 degli Studi di Milano-Bicocca, Milan, Italy","institution_ids":["https://openalex.org/I66752286"]},{"raw_affiliation_string":"DISCo, Universit\u00e0 degli Studi di Milano\u2013Bicocca, Milan, Italy","institution_ids":["https://openalex.org/I66752286"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103118099","display_name":"Marco Previtali","orcid":"https://orcid.org/0000-0003-3040-9539"},"institutions":[{"id":"https://openalex.org/I66752286","display_name":"University of Milano-Bicocca","ror":"https://ror.org/01ynf4891","country_code":"IT","type":"education","lineage":["https://openalex.org/I66752286"]}],"countries":["IT"],"is_corresponding":true,"raw_author_name":"Marco Previtali","raw_affiliation_strings":["DISCo, Universit\u00e0 degli Studi di Milano-Bicocca, Milan, Italy","DISCo, Universit\u00e0 degli Studi di Milano\u2013Bicocca, Milan, Italy"],"raw_orcid":"https://orcid.org/0000-0003-3040-9539","affiliations":[{"raw_affiliation_string":"DISCo, Universit\u00e0 degli Studi di Milano-Bicocca, Milan, Italy","institution_ids":["https://openalex.org/I66752286"]},{"raw_affiliation_string":"DISCo, Universit\u00e0 degli Studi di Milano\u2013Bicocca, Milan, Italy","institution_ids":["https://openalex.org/I66752286"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5086249420","display_name":"Raffaella Rizzi","orcid":"https://orcid.org/0000-0001-9730-7516"},"institutions":[{"id":"https://openalex.org/I66752286","display_name":"University of Milano-Bicocca","ror":"https://ror.org/01ynf4891","country_code":"IT","type":"education","lineage":["https://openalex.org/I66752286"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Raffaella Rizzi","raw_affiliation_strings":["DISCo, Universit\u00e0 degli Studi di Milano-Bicocca, Milan, Italy","DISCo, Universit\u00e0 degli Studi di Milano\u2013Bicocca, Milan, Italy"],"raw_orcid":"https://orcid.org/0000-0001-9730-7516","affiliations":[{"raw_affiliation_string":"DISCo, Universit\u00e0 degli Studi di Milano-Bicocca, Milan, Italy","institution_ids":["https://openalex.org/I66752286"]},{"raw_affiliation_string":"DISCo, Universit\u00e0 degli Studi di Milano\u2013Bicocca, Milan, Italy","institution_ids":["https://openalex.org/I66752286"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5103118099"],"corresponding_institution_ids":["https://openalex.org/I66752286"],"apc_list":{"value":2890,"currency":"USD","value_usd":2890},"apc_paid":null,"fwci":0.5409,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.82302029,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":"78","issue":"2","first_page":"394","last_page":"424"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9966999888420105,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12029","display_name":"DNA and Biological Computing","score":0.9835000038146973,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/string","display_name":"String (physics)","score":0.7017290592193604},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6029176115989685},{"id":"https://openalex.org/keywords/graph","display_name":"Graph","score":0.5380024909973145},{"id":"https://openalex.org/keywords/string-searching-algorithm","display_name":"String searching algorithm","score":0.5028688311576843},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.49081000685691833},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.47823280096054077},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.4772332012653351},{"id":"https://openalex.org/keywords/auxiliary-memory","display_name":"Auxiliary memory","score":0.42648744583129883},{"id":"https://openalex.org/keywords/data-structure","display_name":"Data structure","score":0.3331213593482971},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.22082304954528809}],"concepts":[{"id":"https://openalex.org/C157486923","wikidata":"https://www.wikidata.org/wiki/Q1376436","display_name":"String (physics)","level":2,"score":0.7017290592193604},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6029176115989685},{"id":"https://openalex.org/C132525143","wikidata":"https://www.wikidata.org/wiki/Q141488","display_name":"Graph","level":2,"score":0.5380024909973145},{"id":"https://openalex.org/C7757238","wikidata":"https://www.wikidata.org/wiki/Q374040","display_name":"String searching algorithm","level":3,"score":0.5028688311576843},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.49081000685691833},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.47823280096054077},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.4772332012653351},{"id":"https://openalex.org/C82687282","wikidata":"https://www.wikidata.org/wiki/Q66221","display_name":"Auxiliary memory","level":2,"score":0.42648744583129883},{"id":"https://openalex.org/C162319229","wikidata":"https://www.wikidata.org/wiki/Q175263","display_name":"Data structure","level":2,"score":0.3331213593482971},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.22082304954528809},{"id":"https://openalex.org/C37914503","wikidata":"https://www.wikidata.org/wiki/Q156495","display_name":"Mathematical physics","level":1,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C9390403","wikidata":"https://www.wikidata.org/wiki/Q3966","display_name":"Computer hardware","level":1,"score":0.0}],"mesh":[],"locations_count":5,"locations":[{"id":"doi:10.1007/s00453-016-0165-4","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s00453-016-0165-4","pdf_url":null,"source":{"id":"https://openalex.org/S89324355","display_name":"Algorithmica","issn_l":"0178-4617","issn":["0178-4617","1432-0541"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Algorithmica","raw_type":"journal-article"},{"id":"pmh:oai:arXiv.org:1405.7520","is_oa":true,"landing_page_url":"http://arxiv.org/abs/1405.7520","pdf_url":"https://arxiv.org/pdf/1405.7520","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":"2331-8422","issn":["2331-8422"],"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"text"},{"id":"mag:1812548859","is_oa":true,"landing_page_url":"https://arxiv.org/pdf/1405.7520.pdf","pdf_url":null,"source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":"2331-8422","issn":["2331-8422"],"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"arXiv (Cornell University)","raw_type":null},{"id":"pmh:oai:boa.unimib.it:10281/112989","is_oa":false,"landing_page_url":"http://hdl.handle.net/10281/112989","pdf_url":null,"source":{"id":"https://openalex.org/S4306401259","display_name":"BOA (University of Milano-Bicocca)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I66752286","host_organization_name":"University of Milano-Bicocca","host_organization_lineage":["https://openalex.org/I66752286"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"info:eu-repo/semantics/article"},{"id":"doi:10.48550/arxiv.1405.7520","is_oa":true,"landing_page_url":"https://doi.org/10.48550/arxiv.1405.7520","pdf_url":null,"source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":"2331-8422","issn":["2331-8422"],"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"Preprint"}],"best_oa_location":{"id":"pmh:oai:arXiv.org:1405.7520","is_oa":true,"landing_page_url":"http://arxiv.org/abs/1405.7520","pdf_url":"https://arxiv.org/pdf/1405.7520","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":"2331-8422","issn":["2331-8422"],"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"text"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G3839473829","display_name":null,"funder_award_id":"2013-ATE-0281","funder_id":"https://openalex.org/F4320321610","funder_display_name":"Universit\u00e0 degli Studi di Milano-Bicocca"},{"id":"https://openalex.org/G7276118644","display_name":null,"funder_award_id":"2010LYA9RH","funder_id":"https://openalex.org/F4320321873","funder_display_name":"Ministero dell\u2019Istruzione, dell\u2019Universit\u00e0 e della Ricerca"},{"id":"https://openalex.org/G8802081198","display_name":null,"funder_award_id":"2014-ATE-0382","funder_id":"https://openalex.org/F4320321610","funder_display_name":"Universit\u00e0 degli Studi di Milano-Bicocca"}],"funders":[{"id":"https://openalex.org/F4320321610","display_name":"Universit\u00e0 degli Studi di Milano-Bicocca","ror":"https://ror.org/01ynf4891"},{"id":"https://openalex.org/F4320321873","display_name":"Ministero dell\u2019Istruzione, dell\u2019Universit\u00e0 e della Ricerca","ror":"https://ror.org/0166hxq48"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":39,"referenced_works":["https://openalex.org/W44611053","https://openalex.org/W66725514","https://openalex.org/W144334492","https://openalex.org/W1494345838","https://openalex.org/W1544480906","https://openalex.org/W1598134722","https://openalex.org/W1631295847","https://openalex.org/W1761167196","https://openalex.org/W1868629800","https://openalex.org/W1929174210","https://openalex.org/W1966822396","https://openalex.org/W1967521717","https://openalex.org/W2011699809","https://openalex.org/W2015326607","https://openalex.org/W2025119259","https://openalex.org/W2038142281","https://openalex.org/W2046441184","https://openalex.org/W2051511420","https://openalex.org/W2105656684","https://openalex.org/W2115501618","https://openalex.org/W2119180969","https://openalex.org/W2119279650","https://openalex.org/W2120902911","https://openalex.org/W2127768708","https://openalex.org/W2131106408","https://openalex.org/W2134283755","https://openalex.org/W2134761228","https://openalex.org/W2141920662","https://openalex.org/W2156104322","https://openalex.org/W2159647614","https://openalex.org/W2161048357","https://openalex.org/W2161488606","https://openalex.org/W2163830511","https://openalex.org/W2301039091","https://openalex.org/W3105789150","https://openalex.org/W3137018354","https://openalex.org/W3138241566","https://openalex.org/W4237064155","https://openalex.org/W4247927165"],"related_works":["https://openalex.org/W2963589109","https://openalex.org/W2217511590","https://openalex.org/W2963574866","https://openalex.org/W2949978748","https://openalex.org/W1995433548","https://openalex.org/W3102067360","https://openalex.org/W3159529122","https://openalex.org/W2202487122","https://openalex.org/W2951683349","https://openalex.org/W3101942351","https://openalex.org/W3145425694","https://openalex.org/W2119057313","https://openalex.org/W2336260644","https://openalex.org/W2912947340","https://openalex.org/W2534091751","https://openalex.org/W2912916008","https://openalex.org/W2144834341","https://openalex.org/W2998410131","https://openalex.org/W3162823801","https://openalex.org/W2088179629"],"abstract_inverted_index":null,"counts_by_year":[{"year":2017,"cited_by_count":1}],"updated_date":"2026-07-29T09:40:50.615796","created_date":"2025-10-10T00:00:00"}
