{"id":"https://openalex.org/W4230230393","doi":"https://doi.org/10.1007/s00453-007-0189-x","title":"An Algorithm for Simultaneous Backbone Threading and Side-Chain Packing","display_name":"An Algorithm for Simultaneous Backbone Threading and Side-Chain Packing","publication_year":2007,"publication_date":"2007-07-13","ids":{"openalex":"https://openalex.org/W4230230393","doi":"https://doi.org/10.1007/s00453-007-0189-x"},"language":"en","primary_location":{"id":"doi:10.1007/s00453-007-0189-x","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s00453-007-0189-x","pdf_url":null,"source":{"id":"https://openalex.org/S89324355","display_name":"Algorithmica","issn_l":"0178-4617","issn":["0178-4617","1432-0541"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Algorithmica","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100696687","display_name":"Guojun Li","orcid":"https://orcid.org/0000-0003-1581-5897"},"institutions":[{"id":"https://openalex.org/I154099455","display_name":"Shandong University","ror":"https://ror.org/0207yh398","country_code":"CN","type":"education","lineage":["https://openalex.org/I154099455"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Guojun Li","raw_affiliation_strings":["School of Mathematics and Systems Sciences, Shandong University, Jinan 250100, People's Republic of China"],"affiliations":[{"raw_affiliation_string":"School of Mathematics and Systems Sciences, Shandong University, Jinan 250100, People's Republic of China","institution_ids":["https://openalex.org/I154099455"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100662208","display_name":"Zhijie Liu","orcid":"https://orcid.org/0000-0001-6974-6415"},"institutions":[{"id":"https://openalex.org/I165733156","display_name":"University of Georgia","ror":"https://ror.org/00te3t702","country_code":"US","type":"education","lineage":["https://openalex.org/I165733156"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Zhijie Liu","raw_affiliation_strings":["Department of Biochemistry and Molecular Biology, The University of Georgia, GA 30602, USA"],"affiliations":[{"raw_affiliation_string":"Department of Biochemistry and Molecular Biology, The University of Georgia, GA 30602, USA","institution_ids":["https://openalex.org/I165733156"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5073759158","display_name":"Juntao Guo","orcid":"https://orcid.org/0000-0002-4438-6692"},"institutions":[{"id":"https://openalex.org/I165733156","display_name":"University of Georgia","ror":"https://ror.org/00te3t702","country_code":"US","type":"education","lineage":["https://openalex.org/I165733156"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jun-tao Guo","raw_affiliation_strings":["Department of Biochemistry and Molecular Biology, The University of Georgia, GA 30602, USA"],"affiliations":[{"raw_affiliation_string":"Department of Biochemistry and Molecular Biology, The University of Georgia, GA 30602, USA","institution_ids":["https://openalex.org/I165733156"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100755969","display_name":"Ying Xu","orcid":"https://orcid.org/0000-0003-4158-5263"},"institutions":[{"id":"https://openalex.org/I165733156","display_name":"University of Georgia","ror":"https://ror.org/00te3t702","country_code":"US","type":"education","lineage":["https://openalex.org/I165733156"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ying Xu","raw_affiliation_strings":["Department of Biochemistry and Molecular Biology, The University of Georgia, GA 30602, USA"],"affiliations":[{"raw_affiliation_string":"Department of Biochemistry and Molecular Biology, The University of Georgia, GA 30602, USA","institution_ids":["https://openalex.org/I165733156"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5100696687"],"corresponding_institution_ids":["https://openalex.org/I154099455"],"apc_list":{"value":2290,"currency":"EUR","value_usd":2890},"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.34854813,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"48","issue":"4","first_page":"329","last_page":"342"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9979000091552734,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9979000091552734,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.991599977016449,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10911","display_name":"Chemical Synthesis and Analysis","score":0.9869999885559082,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/threading","display_name":"Threading (protein sequence)","score":0.8257765769958496},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.6402269601821899},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5851874947547913},{"id":"https://openalex.org/keywords/theory-of-computation","display_name":"Theory of computation","score":0.529051661491394},{"id":"https://openalex.org/keywords/packing-problems","display_name":"Packing problems","score":0.4849965274333954},{"id":"https://openalex.org/keywords/graph","display_name":"Graph","score":0.47509539127349854},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.30636370182037354},{"id":"https://openalex.org/keywords/protein-structure","display_name":"Protein structure","score":0.171209454536438}],"concepts":[{"id":"https://openalex.org/C200307862","wikidata":"https://www.wikidata.org/wiki/Q7797175","display_name":"Threading (protein sequence)","level":3,"score":0.8257765769958496},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.6402269601821899},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5851874947547913},{"id":"https://openalex.org/C24858836","wikidata":"https://www.wikidata.org/wiki/Q844718","display_name":"Theory of computation","level":2,"score":0.529051661491394},{"id":"https://openalex.org/C130253271","wikidata":"https://www.wikidata.org/wiki/Q3851477","display_name":"Packing problems","level":2,"score":0.4849965274333954},{"id":"https://openalex.org/C132525143","wikidata":"https://www.wikidata.org/wiki/Q141488","display_name":"Graph","level":2,"score":0.47509539127349854},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.30636370182037354},{"id":"https://openalex.org/C47701112","wikidata":"https://www.wikidata.org/wiki/Q735188","display_name":"Protein structure","level":2,"score":0.171209454536438},{"id":"https://openalex.org/C46141821","wikidata":"https://www.wikidata.org/wiki/Q209402","display_name":"Nuclear magnetic resonance","level":1,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/s00453-007-0189-x","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s00453-007-0189-x","pdf_url":null,"source":{"id":"https://openalex.org/S89324355","display_name":"Algorithmica","issn_l":"0178-4617","issn":["0178-4617","1432-0541"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Algorithmica","raw_type":"journal-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W1554180614","https://openalex.org/W4232948691","https://openalex.org/W2069834727","https://openalex.org/W4300126630","https://openalex.org/W2246807311","https://openalex.org/W2167671877","https://openalex.org/W2380523273","https://openalex.org/W2349503285","https://openalex.org/W4205435224","https://openalex.org/W2253761889"],"abstract_inverted_index":null,"counts_by_year":[],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
