{"id":"https://openalex.org/W2007661494","doi":"https://doi.org/10.1007/s00453-005-1152-3","title":"Sparse Normalized Local Alignment","display_name":"Sparse Normalized Local Alignment","publication_year":2005,"publication_date":"2005-06-14","ids":{"openalex":"https://openalex.org/W2007661494","doi":"https://doi.org/10.1007/s00453-005-1152-3","mag":"2007661494"},"language":"en","primary_location":{"id":"doi:10.1007/s00453-005-1152-3","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s00453-005-1152-3","pdf_url":null,"source":{"id":"https://openalex.org/S89324355","display_name":"Algorithmica","issn_l":"0178-4617","issn":["0178-4617","1432-0541"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Algorithmica","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5063883679","display_name":"Nadav Efraty","orcid":null},"institutions":[{"id":"https://openalex.org/I91203450","display_name":"University of Haifa","ror":"https://ror.org/02f009v59","country_code":"IL","type":"education","lineage":["https://openalex.org/I91203450"]}],"countries":["IL"],"is_corresponding":true,"raw_author_name":"Nadav Efraty","raw_affiliation_strings":["Department of Computer Science, University of Haifa, Haifa 31905, Israel","Department of Computer Science, University of Haifa, Haifa 31905 Israel#TAB#"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of Haifa, Haifa 31905, Israel","institution_ids":["https://openalex.org/I91203450"]},{"raw_affiliation_string":"Department of Computer Science, University of Haifa, Haifa 31905 Israel#TAB#","institution_ids":["https://openalex.org/I91203450"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5111624806","display_name":"Gad M. Landau","orcid":null},"institutions":[{"id":"https://openalex.org/I91203450","display_name":"University of Haifa","ror":"https://ror.org/02f009v59","country_code":"IL","type":"education","lineage":["https://openalex.org/I91203450"]}],"countries":["IL"],"is_corresponding":false,"raw_author_name":"Gad M. Landau","raw_affiliation_strings":["Department of Computer Science, University of Haifa, Haifa 31905, Israel","Department of Computer and Information Science, Polytechnic University, Six MetroTech Center, Brooklyn, NY 11201-3840, USA","Department of Computer Science, University of Haifa, Haifa 31905, Israel and Department of Computer and Information Science, Polytechnic University, Six MetroTech Center, Brooklyn, NY 11201-3840, ...#TAB#"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of Haifa, Haifa 31905, Israel","institution_ids":["https://openalex.org/I91203450"]},{"raw_affiliation_string":"Department of Computer and Information Science, Polytechnic University, Six MetroTech Center, Brooklyn, NY 11201-3840, USA","institution_ids":[]},{"raw_affiliation_string":"Department of Computer Science, University of Haifa, Haifa 31905, Israel and Department of Computer and Information Science, Polytechnic University, Six MetroTech Center, Brooklyn, NY 11201-3840, ...#TAB#","institution_ids":["https://openalex.org/I91203450"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5063883679"],"corresponding_institution_ids":["https://openalex.org/I91203450"],"apc_list":{"value":2290,"currency":"EUR","value_usd":2890},"apc_paid":null,"fwci":0.4572,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.73878788,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"43","issue":"3","first_page":"179","last_page":"194"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12326","display_name":"Network Packet Processing and Optimization","score":0.9908000230789185,"subfield":{"id":"https://openalex.org/subfields/1708","display_name":"Hardware and Architecture"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12029","display_name":"DNA and Biological Computing","score":0.9889000058174133,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/substring","display_name":"Substring","score":0.9848957061767578},{"id":"https://openalex.org/keywords/combinatorics","display_name":"Combinatorics","score":0.801874041557312},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.6578975915908813},{"id":"https://openalex.org/keywords/integer","display_name":"Integer (computer science)","score":0.5637419819831848},{"id":"https://openalex.org/keywords/alphabet","display_name":"Alphabet","score":0.5214371085166931},{"id":"https://openalex.org/keywords/binary-logarithm","display_name":"Binary logarithm","score":0.48676466941833496},{"id":"https://openalex.org/keywords/metric","display_name":"Metric (unit)","score":0.47744137048721313},{"id":"https://openalex.org/keywords/similarity","display_name":"Similarity (geometry)","score":0.47038590908050537},{"id":"https://openalex.org/keywords/value","display_name":"Value (mathematics)","score":0.450104683637619},{"id":"https://openalex.org/keywords/theory-of-computation","display_name":"Theory of computation","score":0.441432923078537},{"id":"https://openalex.org/keywords/data-structure","display_name":"Data structure","score":0.3651891350746155},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.2883232831954956},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.12438926100730896},{"id":"https://openalex.org/keywords/statistics","display_name":"Statistics","score":0.10185980796813965},{"id":"https://openalex.org/keywords/image","display_name":"Image (mathematics)","score":0.09565410017967224},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.0733957290649414}],"concepts":[{"id":"https://openalex.org/C182407805","wikidata":"https://www.wikidata.org/wiki/Q2626534","display_name":"Substring","level":3,"score":0.9848957061767578},{"id":"https://openalex.org/C114614502","wikidata":"https://www.wikidata.org/wiki/Q76592","display_name":"Combinatorics","level":1,"score":0.801874041557312},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.6578975915908813},{"id":"https://openalex.org/C97137487","wikidata":"https://www.wikidata.org/wiki/Q729138","display_name":"Integer (computer science)","level":2,"score":0.5637419819831848},{"id":"https://openalex.org/C112876837","wikidata":"https://www.wikidata.org/wiki/Q837518","display_name":"Alphabet","level":2,"score":0.5214371085166931},{"id":"https://openalex.org/C63553672","wikidata":"https://www.wikidata.org/wiki/Q581168","display_name":"Binary logarithm","level":2,"score":0.48676466941833496},{"id":"https://openalex.org/C176217482","wikidata":"https://www.wikidata.org/wiki/Q860554","display_name":"Metric (unit)","level":2,"score":0.47744137048721313},{"id":"https://openalex.org/C103278499","wikidata":"https://www.wikidata.org/wiki/Q254465","display_name":"Similarity (geometry)","level":3,"score":0.47038590908050537},{"id":"https://openalex.org/C2776291640","wikidata":"https://www.wikidata.org/wiki/Q2912517","display_name":"Value (mathematics)","level":2,"score":0.450104683637619},{"id":"https://openalex.org/C24858836","wikidata":"https://www.wikidata.org/wiki/Q844718","display_name":"Theory of computation","level":2,"score":0.441432923078537},{"id":"https://openalex.org/C162319229","wikidata":"https://www.wikidata.org/wiki/Q175263","display_name":"Data structure","level":2,"score":0.3651891350746155},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.2883232831954956},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.12438926100730896},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.10185980796813965},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.09565410017967224},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.0733957290649414},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.0},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C21547014","wikidata":"https://www.wikidata.org/wiki/Q1423657","display_name":"Operations management","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/s00453-005-1152-3","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s00453-005-1152-3","pdf_url":null,"source":{"id":"https://openalex.org/S89324355","display_name":"Algorithmica","issn_l":"0178-4617","issn":["0178-4617","1432-0541"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Algorithmica","raw_type":"journal-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":23,"referenced_works":["https://openalex.org/W9273873","https://openalex.org/W140985484","https://openalex.org/W938539187","https://openalex.org/W1496038746","https://openalex.org/W1501400124","https://openalex.org/W1520631193","https://openalex.org/W1608492704","https://openalex.org/W1647671624","https://openalex.org/W1948141881","https://openalex.org/W1977421134","https://openalex.org/W1983325631","https://openalex.org/W1987042978","https://openalex.org/W1992904575","https://openalex.org/W2004215917","https://openalex.org/W2008123902","https://openalex.org/W2027506564","https://openalex.org/W2059513841","https://openalex.org/W2087064593","https://openalex.org/W2124115696","https://openalex.org/W2141416885","https://openalex.org/W2162744351","https://openalex.org/W2610179052","https://openalex.org/W2611477341"],"related_works":["https://openalex.org/W2150917858","https://openalex.org/W2962729514","https://openalex.org/W2765602410","https://openalex.org/W1567910696","https://openalex.org/W2055821317","https://openalex.org/W2158367536","https://openalex.org/W2136838521","https://openalex.org/W2030605270","https://openalex.org/W4301385667","https://openalex.org/W2951256320"],"abstract_inverted_index":null,"counts_by_year":[],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}