{"id":"https://openalex.org/W2777621233","doi":"https://doi.org/10.1007/s00357-018-9279-5","title":"Hierarchies from Lowest Stable Ancestors in Nonbinary Phylogenetic Networks","display_name":"Hierarchies from Lowest Stable Ancestors in Nonbinary Phylogenetic Networks","publication_year":2018,"publication_date":"2018-11-16","ids":{"openalex":"https://openalex.org/W2777621233","doi":"https://doi.org/10.1007/s00357-018-9279-5","mag":"2777621233"},"language":"en","primary_location":{"id":"doi:10.1007/s00357-018-9279-5","is_oa":true,"landing_page_url":"https://doi.org/10.1007/s00357-018-9279-5","pdf_url":"https://link.springer.com/content/pdf/10.1007/s00357-018-9279-5.pdf","source":{"id":"https://openalex.org/S73028643","display_name":"Journal of Classification","issn_l":"0176-4268","issn":["0176-4268","1432-1343"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Classification","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://link.springer.com/content/pdf/10.1007/s00357-018-9279-5.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5007694498","display_name":"Katharina T. Huber","orcid":"https://orcid.org/0000-0002-6368-7511"},"institutions":[{"id":"https://openalex.org/I1118541","display_name":"University of East Anglia","ror":"https://ror.org/026k5mg93","country_code":"GB","type":"education","lineage":["https://openalex.org/I1118541"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"Katharina T. Huber","raw_affiliation_strings":["School of Computing Sciences, University of East Anglia, Norwich, UK"],"affiliations":[{"raw_affiliation_string":"School of Computing Sciences, University of East Anglia, Norwich, UK","institution_ids":["https://openalex.org/I1118541"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5042929579","display_name":"Vincent Moulton","orcid":"https://orcid.org/0000-0001-9371-6435"},"institutions":[{"id":"https://openalex.org/I1118541","display_name":"University of East Anglia","ror":"https://ror.org/026k5mg93","country_code":"GB","type":"education","lineage":["https://openalex.org/I1118541"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Vincent Moulton","raw_affiliation_strings":["School of Computing Sciences, University of East Anglia, Norwich, UK"],"affiliations":[{"raw_affiliation_string":"School of Computing Sciences, University of East Anglia, Norwich, UK","institution_ids":["https://openalex.org/I1118541"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5057121631","display_name":"Taoyang Wu","orcid":"https://orcid.org/0000-0002-2663-2001"},"institutions":[{"id":"https://openalex.org/I1118541","display_name":"University of East Anglia","ror":"https://ror.org/026k5mg93","country_code":"GB","type":"education","lineage":["https://openalex.org/I1118541"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Taoyang Wu","raw_affiliation_strings":["School of Computing Sciences, University of East Anglia, Norwich, UK"],"affiliations":[{"raw_affiliation_string":"School of Computing Sciences, University of East Anglia, Norwich, UK","institution_ids":["https://openalex.org/I1118541"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5007694498"],"corresponding_institution_ids":["https://openalex.org/I1118541"],"apc_list":{"value":2390,"currency":"EUR","value_usd":2990},"apc_paid":{"value":2390,"currency":"EUR","value_usd":2990},"fwci":0.0,"has_fulltext":true,"cited_by_count":4,"citation_normalized_percentile":{"value":0.00262177,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"36","issue":"2","first_page":"200","last_page":"231"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10385","display_name":"Plant Diversity and Evolution","score":0.9847999811172485,"subfield":{"id":"https://openalex.org/subfields/1105","display_name":"Ecology, Evolution, Behavior and Systematics"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10012","display_name":"Genetic diversity and population structure","score":0.9666000008583069,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/phylogenetic-tree","display_name":"Phylogenetic tree","score":0.7696650624275208},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.5385954976081848},{"id":"https://openalex.org/keywords/evolutionary-biology","display_name":"Evolutionary biology","score":0.49153050780296326},{"id":"https://openalex.org/keywords/combinatorics","display_name":"Combinatorics","score":0.48227694630622864},{"id":"https://openalex.org/keywords/phylogenetic-network","display_name":"Phylogenetic network","score":0.45360100269317627},{"id":"https://openalex.org/keywords/phylogenetics","display_name":"Phylogenetics","score":0.43550950288772583},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.37878578901290894},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.23146218061447144},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.07573527097702026}],"concepts":[{"id":"https://openalex.org/C193252679","wikidata":"https://www.wikidata.org/wiki/Q242125","display_name":"Phylogenetic tree","level":3,"score":0.7696650624275208},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.5385954976081848},{"id":"https://openalex.org/C78458016","wikidata":"https://www.wikidata.org/wiki/Q840400","display_name":"Evolutionary biology","level":1,"score":0.49153050780296326},{"id":"https://openalex.org/C114614502","wikidata":"https://www.wikidata.org/wiki/Q76592","display_name":"Combinatorics","level":1,"score":0.48227694630622864},{"id":"https://openalex.org/C26619641","wikidata":"https://www.wikidata.org/wiki/Q3142246","display_name":"Phylogenetic network","level":4,"score":0.45360100269317627},{"id":"https://openalex.org/C90132467","wikidata":"https://www.wikidata.org/wiki/Q171184","display_name":"Phylogenetics","level":3,"score":0.43550950288772583},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.37878578901290894},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.23146218061447144},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.07573527097702026}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1007/s00357-018-9279-5","is_oa":true,"landing_page_url":"https://doi.org/10.1007/s00357-018-9279-5","pdf_url":"https://link.springer.com/content/pdf/10.1007/s00357-018-9279-5.pdf","source":{"id":"https://openalex.org/S73028643","display_name":"Journal of Classification","issn_l":"0176-4268","issn":["0176-4268","1432-1343"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Classification","raw_type":"journal-article"},{"id":"pmh:oai:ueaeprints.uea.ac.uk:65193","is_oa":false,"landing_page_url":null,"pdf_url":null,"source":{"id":"https://openalex.org/S4306400384","display_name":"UEA Digital Repository (University of East Anglia)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1118541","host_organization_name":"University of East Anglia","host_organization_lineage":["https://openalex.org/I1118541"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":null,"raw_type":"PeerReviewed"},{"id":"pmh:oai:RePEc:spr:jclass:v:36:y:2019:i:2:d:10.1007_s00357-018-9279-5","is_oa":false,"landing_page_url":"http://link.springer.com/10.1007/s00357-018-9279-5","pdf_url":null,"source":{"id":"https://openalex.org/S4306401271","display_name":"RePEc: Research Papers in Economics","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I77793887","host_organization_name":"Federal Reserve Bank of St. Louis","host_organization_lineage":["https://openalex.org/I77793887"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"article"}],"best_oa_location":{"id":"doi:10.1007/s00357-018-9279-5","is_oa":true,"landing_page_url":"https://doi.org/10.1007/s00357-018-9279-5","pdf_url":"https://link.springer.com/content/pdf/10.1007/s00357-018-9279-5.pdf","source":{"id":"https://openalex.org/S73028643","display_name":"Journal of Classification","issn_l":"0176-4268","issn":["0176-4268","1432-1343"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Classification","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320320274","display_name":"University of East Anglia","ror":"https://ror.org/026k5mg93"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2777621233.pdf","grobid_xml":"https://content.openalex.org/works/W2777621233.grobid-xml"},"referenced_works_count":25,"referenced_works":["https://openalex.org/W140130170","https://openalex.org/W1638410732","https://openalex.org/W1821350330","https://openalex.org/W1911223732","https://openalex.org/W1964226922","https://openalex.org/W2066429145","https://openalex.org/W2090258182","https://openalex.org/W2097361203","https://openalex.org/W2112400707","https://openalex.org/W2118520714","https://openalex.org/W2120291315","https://openalex.org/W2128431749","https://openalex.org/W2152997891","https://openalex.org/W2156244960","https://openalex.org/W2295960879","https://openalex.org/W2338540174","https://openalex.org/W2344026690","https://openalex.org/W2484986946","https://openalex.org/W2584236313","https://openalex.org/W2886143626","https://openalex.org/W4243187486","https://openalex.org/W4252075601","https://openalex.org/W4254268221","https://openalex.org/W4388212639","https://openalex.org/W6697432708"],"related_works":["https://openalex.org/W4254268221","https://openalex.org/W2951650999","https://openalex.org/W2038264393","https://openalex.org/W147282674","https://openalex.org/W2112400707","https://openalex.org/W4300585845","https://openalex.org/W2101991559","https://openalex.org/W2065083790","https://openalex.org/W2604174992","https://openalex.org/W2057191541"],"abstract_inverted_index":{"The":[0],"reconstruction":[1,177],"of":[2,6,9,24,63,76,85,88,122,125,139,156,173],"the":[3,61,74,83,103,120,123,137,145,171],"evolutionary":[4,25,42],"history":[5],"a":[7,22,56,77,89,92,126,153],"set":[8,79,150],"species":[10,34],"is":[11],"an":[12,40],"important":[13,41],"problem":[14],"in":[15,135],"classification":[16],"and":[17,80,94],"phylogenetics.":[18],"Phylogenetic":[19],"networks":[20,64,157],"are":[21,28,66],"generalization":[23],"trees":[26],"that":[27,35,65,82,95,116,164],"used":[29],"to":[30,59,113],"represent":[31],"histories":[32],"for":[33,44,152,170],"have":[36,131],"undergone":[37],"reticulate":[38],"evolution,":[39],"force":[43],"many":[45],"organisms":[46],"(e.g.":[47],"plants":[48],"or":[49,105],"viruses).":[50],"In":[51],"this":[52,96],"paper,":[53],"we":[54,72,162],"present":[55],"novel":[57],"approach":[58],"understanding":[60],"structure":[62,138],"not":[67],"necessarily":[68],"binary.":[69],"More":[70],"specifically,":[71],"define":[73],"concept":[75,121],"closed":[78,86,117,147],"show":[81,115],"collection":[84],"sets":[87,118,129,148],"network":[90,176],"forms":[91],"hierarchy,":[93],"hierarchy":[97],"can":[98],"be":[99,168],"deduced":[100],"from":[101],"either":[102],"subtrees":[104],"subnetworks":[106],"on":[107],"all":[108],"3-subsets.":[109],"This":[110],"allows":[111],"us":[112],"also":[114,143],"generalize":[119],"SN-sets":[124],"binary":[127,140],"network,":[128],"which":[130],"proven":[132],"very":[133],"useful":[134,169],"elucidating":[136],"networks.":[141],"We":[142],"characterize":[144],"minimal":[146],"(under":[149],"inclusion)":[151],"special":[154],"class":[155],"(2-terminal":[158],"networks).":[159],"Taken":[160],"together,":[161],"anticipate":[163],"our":[165],"results":[166],"should":[167],"development":[172],"new":[174],"phylogenetic":[175],"algorithms.":[178]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":1},{"year":2022,"cited_by_count":1}],"updated_date":"2026-03-06T13:50:29.536080","created_date":"2025-10-10T00:00:00"}