{"id":"https://openalex.org/W1840916145","doi":"https://doi.org/10.1007/bfb0054081","title":"Pattern discovery in biosequences","display_name":"Pattern discovery in biosequences","publication_year":1998,"publication_date":"1998-01-01","ids":{"openalex":"https://openalex.org/W1840916145","doi":"https://doi.org/10.1007/bfb0054081","mag":"1840916145"},"language":"en","primary_location":{"id":"doi:10.1007/bfb0054081","is_oa":false,"landing_page_url":"https://doi.org/10.1007/bfb0054081","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5081419327","display_name":"Alvis Br\u0101zma","orcid":"https://orcid.org/0000-0001-5988-7409"},"institutions":[{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"Alvis Br\u0101zma","raw_affiliation_strings":["EMBL Outstation - Hinxton, European Bioinformatics Institute, Wellcome Trust Genome Campus, CB10 1SD, Hinxton, Cambridge, UK","European Bioinformatics Institute"],"affiliations":[{"raw_affiliation_string":"EMBL Outstation - Hinxton, European Bioinformatics Institute, Wellcome Trust Genome Campus, CB10 1SD, Hinxton, Cambridge, UK","institution_ids":["https://openalex.org/I1303153112"]},{"raw_affiliation_string":"European Bioinformatics Institute","institution_ids":["https://openalex.org/I1303153112"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5012964587","display_name":"Inge Jonassen","orcid":"https://orcid.org/0000-0003-4110-0748"},"institutions":[{"id":"https://openalex.org/I4432739","display_name":"University of Bergen","ror":"https://ror.org/03zga2b32","country_code":"NO","type":"education","lineage":["https://openalex.org/I4432739"]}],"countries":["NO"],"is_corresponding":false,"raw_author_name":"Inge Jonassen","raw_affiliation_strings":["Department of Informatics, University of Bergen, HIB, N5020, Bergen, Norway","University of Bergen, HIB"],"affiliations":[{"raw_affiliation_string":"Department of Informatics, University of Bergen, HIB, N5020, Bergen, Norway","institution_ids":["https://openalex.org/I4432739"]},{"raw_affiliation_string":"University of Bergen, HIB","institution_ids":["https://openalex.org/I4432739"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5011429527","display_name":"Jaak Vilo","orcid":"https://orcid.org/0000-0001-5604-4107"},"institutions":[{"id":"https://openalex.org/I133731052","display_name":"University of Helsinki","ror":"https://ror.org/040af2s02","country_code":"FI","type":"education","lineage":["https://openalex.org/I133731052"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Jaak Vilo","raw_affiliation_strings":["Department of Computer Science, University of Helsinki, University of Helsinki, P.O.Box 26, FIN-00014, Finland","#N##TAB##TAB##TAB##TAB# University of Helsinki#N##TAB##TAB##TAB#"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of Helsinki, University of Helsinki, P.O.Box 26, FIN-00014, Finland","institution_ids":["https://openalex.org/I133731052"]},{"raw_affiliation_string":"#N##TAB##TAB##TAB##TAB# University of Helsinki#N##TAB##TAB##TAB#","institution_ids":["https://openalex.org/I133731052"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5058284151","display_name":"Esko Ukkonen","orcid":"https://orcid.org/0000-0002-5978-1505"},"institutions":[{"id":"https://openalex.org/I133731052","display_name":"University of Helsinki","ror":"https://ror.org/040af2s02","country_code":"FI","type":"education","lineage":["https://openalex.org/I133731052"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Esko Ukkonen","raw_affiliation_strings":["Department of Computer Science, University of Helsinki, University of Helsinki, P.O.Box 26, FIN-00014, Finland","#N##TAB##TAB##TAB##TAB# University of Helsinki#N##TAB##TAB##TAB#"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of Helsinki, University of Helsinki, P.O.Box 26, FIN-00014, Finland","institution_ids":["https://openalex.org/I133731052"]},{"raw_affiliation_string":"#N##TAB##TAB##TAB##TAB# University of Helsinki#N##TAB##TAB##TAB#","institution_ids":["https://openalex.org/I133731052"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5081419327"],"corresponding_institution_ids":["https://openalex.org/I1303153112"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":2.445,"has_fulltext":false,"cited_by_count":48,"citation_normalized_percentile":{"value":0.88697356,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":null,"issue":null,"first_page":"257","last_page":"270"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9984999895095825,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9984999895095825,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10222","display_name":"Genomics and Chromatin Dynamics","score":0.9962000250816345,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9923999905586243,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.722017765045166},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.5159364342689514},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.434678316116333},{"id":"https://openalex.org/keywords/function","display_name":"Function (biology)","score":0.4290097653865814},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.3385365605354309},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3298701047897339},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.32061439752578735},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.18996888399124146},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.13645848631858826}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.722017765045166},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.5159364342689514},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.434678316116333},{"id":"https://openalex.org/C14036430","wikidata":"https://www.wikidata.org/wiki/Q3736076","display_name":"Function (biology)","level":2,"score":0.4290097653865814},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3385365605354309},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3298701047897339},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.32061439752578735},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.18996888399124146},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.13645848631858826},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/bfb0054081","is_oa":false,"landing_page_url":"https://doi.org/10.1007/bfb0054081","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320313288","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52"},{"id":"https://openalex.org/F4320323299","display_name":"Norges Forskningsr\u00e5d","ror":"https://ror.org/00epmv149"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":43,"referenced_works":["https://openalex.org/W127764100","https://openalex.org/W136935998","https://openalex.org/W1505882215","https://openalex.org/W1507194301","https://openalex.org/W1638203394","https://openalex.org/W1965415591","https://openalex.org/W1966059441","https://openalex.org/W1969005071","https://openalex.org/W1971143006","https://openalex.org/W1973754133","https://openalex.org/W1982996449","https://openalex.org/W1988393300","https://openalex.org/W1998300401","https://openalex.org/W2000826343","https://openalex.org/W2002638840","https://openalex.org/W2009566340","https://openalex.org/W2029135821","https://openalex.org/W2031119996","https://openalex.org/W2032991899","https://openalex.org/W2035588418","https://openalex.org/W2036667662","https://openalex.org/W2038580939","https://openalex.org/W2039775516","https://openalex.org/W2047630272","https://openalex.org/W2053803579","https://openalex.org/W2054658115","https://openalex.org/W2057368087","https://openalex.org/W2059513841","https://openalex.org/W2068577315","https://openalex.org/W2078502904","https://openalex.org/W2102122585","https://openalex.org/W2107412629","https://openalex.org/W2110355340","https://openalex.org/W2121252285","https://openalex.org/W2135914634","https://openalex.org/W2137428312","https://openalex.org/W2153283265","https://openalex.org/W2156899368","https://openalex.org/W2157054705","https://openalex.org/W2165011536","https://openalex.org/W3003623942","https://openalex.org/W4229588480","https://openalex.org/W6605629772"],"related_works":["https://openalex.org/W2380805646","https://openalex.org/W3003915767","https://openalex.org/W2372756775","https://openalex.org/W2406407882","https://openalex.org/W2444281417","https://openalex.org/W2131241925","https://openalex.org/W2134031495","https://openalex.org/W2780904421","https://openalex.org/W2375986632","https://openalex.org/W2383918176"],"abstract_inverted_index":null,"counts_by_year":[{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":1},{"year":2019,"cited_by_count":2},{"year":2016,"cited_by_count":1},{"year":2015,"cited_by_count":2},{"year":2014,"cited_by_count":1},{"year":2013,"cited_by_count":1},{"year":2012,"cited_by_count":3}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
