{"id":"https://openalex.org/W1517280616","doi":"https://doi.org/10.1007/bfb0033212","title":"Fast protein fold recognition and accurate sequence-structure alignment","display_name":"Fast protein fold recognition and accurate sequence-structure alignment","publication_year":1996,"publication_date":"1996-01-01","ids":{"openalex":"https://openalex.org/W1517280616","doi":"https://doi.org/10.1007/bfb0033212","mag":"1517280616"},"language":"en","primary_location":{"id":"doi:10.1007/bfb0033212","is_oa":false,"landing_page_url":"https://doi.org/10.1007/bfb0033212","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5068859428","display_name":"Ralf Zimmer","orcid":"https://orcid.org/0000-0003-1439-2327"},"institutions":[{"id":"https://openalex.org/I4210098248","display_name":"Fraunhofer Institute for Algorithms and Scientific Computing","ror":"https://ror.org/00trw9c49","country_code":"DE","type":"facility","lineage":["https://openalex.org/I4210098248","https://openalex.org/I4923324"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"Ralf Zimmer","raw_affiliation_strings":["GMD - German National Research Center for Information Technology, SCAI - Institute for Algorithms and Scientific Computing, Schlo\\ Birlinghoven, P.O. Box 1316, 53754, Sankt Augustin, Germany","SCAI - Institute for Algorithms and Scientific Computing"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"GMD - German National Research Center for Information Technology, SCAI - Institute for Algorithms and Scientific Computing, Schlo\\ Birlinghoven, P.O. Box 1316, 53754, Sankt Augustin, Germany","institution_ids":["https://openalex.org/I4210098248"]},{"raw_affiliation_string":"SCAI - Institute for Algorithms and Scientific Computing","institution_ids":["https://openalex.org/I4210098248"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5058587574","display_name":"Ralf Thiele","orcid":null},"institutions":[{"id":"https://openalex.org/I4210098248","display_name":"Fraunhofer Institute for Algorithms and Scientific Computing","ror":"https://ror.org/00trw9c49","country_code":"DE","type":"facility","lineage":["https://openalex.org/I4210098248","https://openalex.org/I4923324"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Ralf Thiele","raw_affiliation_strings":["GMD - German National Research Center for Information Technology, SCAI - Institute for Algorithms and Scientific Computing, Schlo\\ Birlinghoven, P.O. Box 1316, 53754, Sankt Augustin, Germany","SCAI - Institute for Algorithms and Scientific Computing"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"GMD - German National Research Center for Information Technology, SCAI - Institute for Algorithms and Scientific Computing, Schlo\\ Birlinghoven, P.O. Box 1316, 53754, Sankt Augustin, Germany","institution_ids":["https://openalex.org/I4210098248"]},{"raw_affiliation_string":"SCAI - Institute for Algorithms and Scientific Computing","institution_ids":["https://openalex.org/I4210098248"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5068859428"],"corresponding_institution_ids":["https://openalex.org/I4210098248"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":0.884,"has_fulltext":false,"cited_by_count":6,"citation_normalized_percentile":{"value":0.75663613,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"137","last_page":"146"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10602","display_name":"Glycosylation and Glycoproteins Research","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10602","display_name":"Glycosylation and Glycoproteins Research","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11162","display_name":"Enzyme Structure and Function","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9975000023841858,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/threading","display_name":"Threading (protein sequence)","score":0.9128194451332092},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.763376772403717},{"id":"https://openalex.org/keywords/structural-alignment","display_name":"Structural alignment","score":0.6967060565948486},{"id":"https://openalex.org/keywords/sequence-alignment","display_name":"Sequence alignment","score":0.6686335206031799},{"id":"https://openalex.org/keywords/protein-structure-prediction","display_name":"Protein structure prediction","score":0.5912582278251648},{"id":"https://openalex.org/keywords/loop-modeling","display_name":"Loop modeling","score":0.5516119599342346},{"id":"https://openalex.org/keywords/multiple-sequence-alignment","display_name":"Multiple sequence alignment","score":0.546096920967102},{"id":"https://openalex.org/keywords/homology-modeling","display_name":"Homology modeling","score":0.5446722507476807},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.5178687572479248},{"id":"https://openalex.org/keywords/protein-structure","display_name":"Protein structure","score":0.49800968170166016},{"id":"https://openalex.org/keywords/simplex","display_name":"Simplex","score":0.4614139795303345},{"id":"https://openalex.org/keywords/alignment-free-sequence-analysis","display_name":"Alignment-free sequence analysis","score":0.44030851125717163},{"id":"https://openalex.org/keywords/protein-sequencing","display_name":"Protein sequencing","score":0.4258610010147095},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.4225921332836151},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.4101486802101135},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.40778863430023193},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.4007113575935364},{"id":"https://openalex.org/keywords/peptide-sequence","display_name":"Peptide sequence","score":0.32980096340179443},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.13953232765197754},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.12602472305297852},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.0974321961402893},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.08916148543357849}],"concepts":[{"id":"https://openalex.org/C200307862","wikidata":"https://www.wikidata.org/wiki/Q7797175","display_name":"Threading (protein sequence)","level":3,"score":0.9128194451332092},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.763376772403717},{"id":"https://openalex.org/C4668613","wikidata":"https://www.wikidata.org/wiki/Q4116110","display_name":"Structural alignment","level":5,"score":0.6967060565948486},{"id":"https://openalex.org/C45484198","wikidata":"https://www.wikidata.org/wiki/Q827246","display_name":"Sequence alignment","level":4,"score":0.6686335206031799},{"id":"https://openalex.org/C18051474","wikidata":"https://www.wikidata.org/wiki/Q899656","display_name":"Protein structure prediction","level":3,"score":0.5912582278251648},{"id":"https://openalex.org/C45475804","wikidata":"https://www.wikidata.org/wiki/Q6675846","display_name":"Loop modeling","level":4,"score":0.5516119599342346},{"id":"https://openalex.org/C88031987","wikidata":"https://www.wikidata.org/wiki/Q1377767","display_name":"Multiple sequence alignment","level":5,"score":0.546096920967102},{"id":"https://openalex.org/C169627665","wikidata":"https://www.wikidata.org/wiki/Q5767913","display_name":"Homology modeling","level":3,"score":0.5446722507476807},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.5178687572479248},{"id":"https://openalex.org/C47701112","wikidata":"https://www.wikidata.org/wiki/Q735188","display_name":"Protein structure","level":2,"score":0.49800968170166016},{"id":"https://openalex.org/C62438384","wikidata":"https://www.wikidata.org/wiki/Q331350","display_name":"Simplex","level":2,"score":0.4614139795303345},{"id":"https://openalex.org/C180384323","wikidata":"https://www.wikidata.org/wiki/Q16335137","display_name":"Alignment-free sequence analysis","level":5,"score":0.44030851125717163},{"id":"https://openalex.org/C10010492","wikidata":"https://www.wikidata.org/wiki/Q3142557","display_name":"Protein sequencing","level":4,"score":0.4258610010147095},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.4225921332836151},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.4101486802101135},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.40778863430023193},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.4007113575935364},{"id":"https://openalex.org/C167625842","wikidata":"https://www.wikidata.org/wiki/Q899763","display_name":"Peptide sequence","level":3,"score":0.32980096340179443},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.13953232765197754},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.12602472305297852},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.0974321961402893},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.08916148543357849},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C2524010","wikidata":"https://www.wikidata.org/wiki/Q8087","display_name":"Geometry","level":1,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C181199279","wikidata":"https://www.wikidata.org/wiki/Q8047","display_name":"Enzyme","level":2,"score":0.0}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.1007/bfb0033212","is_oa":false,"landing_page_url":"https://doi.org/10.1007/bfb0033212","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},{"id":"pmh:oai:fraunhofer.de:970335","is_oa":false,"landing_page_url":"http://publica.fraunhofer.de/documents/970335.html","pdf_url":null,"source":{"id":"https://openalex.org/S4306400801","display_name":"Publikationsdatenbank der Fraunhofer-Gesellschaft (Fraunhofer-Gesellschaft)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4923324","host_organization_name":"Fraunhofer-Gesellschaft","host_organization_lineage":["https://openalex.org/I4923324"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Fraunhofer SCAI","raw_type":"Conference Paper"},{"id":"pmh:oai:pub.h-brs.de:1781","is_oa":false,"landing_page_url":"https://pub.h-brs.de/frontdoor/index/index/docId/1781","pdf_url":null,"source":{"id":"https://openalex.org/S4306400385","display_name":"Publication Server of Bonn-Rhein-Sieg University of Applied Sciences (Bonn-Rhein-Sieg University of Applied Sciences)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I135140700","host_organization_name":"University of Bonn","host_organization_lineage":["https://openalex.org/I135140700"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Hofest\u00e4dt, Lengauer et al. (Eds.): German Conference on Bioinformatics, GCB'96. Leipzig, Germany September 30 - October 2, 1996. Lecture Notes in Computer Science (LNCS), volume 1278","raw_type":"conferenceobject"},{"id":"pmh:oai:publica.fraunhofer.de:publica/329639","is_oa":false,"landing_page_url":"https://publica.fraunhofer.de/handle/publica/329639","pdf_url":null,"source":{"id":"https://openalex.org/S4306400318","display_name":"Fraunhofer-Publica (Fraunhofer-Gesellschaft)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4923324","host_organization_name":"Fraunhofer-Gesellschaft","host_organization_lineage":["https://openalex.org/I4923324"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"conference paper"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":19,"referenced_works":["https://openalex.org/W1524556134","https://openalex.org/W1555532796","https://openalex.org/W1589812083","https://openalex.org/W1966041739","https://openalex.org/W1978132986","https://openalex.org/W1984105748","https://openalex.org/W2014948872","https://openalex.org/W2040594319","https://openalex.org/W2065283382","https://openalex.org/W2072814963","https://openalex.org/W2074051138","https://openalex.org/W2099047634","https://openalex.org/W2099254366","https://openalex.org/W2117019496","https://openalex.org/W2118817344","https://openalex.org/W2133715954","https://openalex.org/W2156160803","https://openalex.org/W2600349519","https://openalex.org/W2915190566"],"related_works":["https://openalex.org/W1741740882","https://openalex.org/W1989090710","https://openalex.org/W2088487249","https://openalex.org/W2015399150","https://openalex.org/W24291664","https://openalex.org/W2398461637","https://openalex.org/W2009133913","https://openalex.org/W2414840205","https://openalex.org/W2070955689","https://openalex.org/W2005647400"],"abstract_inverted_index":null,"counts_by_year":[],"updated_date":"2026-05-04T08:30:34.212998","created_date":"2025-10-10T00:00:00"}