{"id":"https://openalex.org/W4387425055","doi":"https://doi.org/10.1007/978-981-99-7074-2_13","title":"ricME: Long-Read Based Mobile Element Variant Detection Using Sequence Realignment and Identity Calculation","display_name":"ricME: Long-Read Based Mobile Element Variant Detection Using Sequence Realignment and Identity Calculation","publication_year":2023,"publication_date":"2023-01-01","ids":{"openalex":"https://openalex.org/W4387425055","doi":"https://doi.org/10.1007/978-981-99-7074-2_13"},"language":"en","primary_location":{"id":"doi:10.1007/978-981-99-7074-2_13","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-981-99-7074-2_13","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100294905","display_name":"Huidong Ma","orcid":null},"institutions":[{"id":"https://openalex.org/I150807315","display_name":"Guangxi University","ror":"https://ror.org/02c9qn167","country_code":"CN","type":"education","lineage":["https://openalex.org/I150807315"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Huidong Ma","raw_affiliation_strings":["Key Laboratory of Parallel, Distributed and Intelligent Computing in Guangxi Universities and Colleges, Nanning, Guangxi, China","School of Computer, Electronic and Information, Guangxi University, Nanning, Guangxi, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Key Laboratory of Parallel, Distributed and Intelligent Computing in Guangxi Universities and Colleges, Nanning, Guangxi, China","institution_ids":["https://openalex.org/I150807315"]},{"raw_affiliation_string":"School of Computer, Electronic and Information, Guangxi University, Nanning, Guangxi, China","institution_ids":["https://openalex.org/I150807315"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101747550","display_name":"Cheng Zhong","orcid":"https://orcid.org/0000-0002-5560-2151"},"institutions":[{"id":"https://openalex.org/I150807315","display_name":"Guangxi University","ror":"https://ror.org/02c9qn167","country_code":"CN","type":"education","lineage":["https://openalex.org/I150807315"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Cheng Zhong","raw_affiliation_strings":["Key Laboratory of Parallel, Distributed and Intelligent Computing in Guangxi Universities and Colleges, Nanning, Guangxi, China","School of Computer, Electronic and Information, Guangxi University, Nanning, Guangxi, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Key Laboratory of Parallel, Distributed and Intelligent Computing in Guangxi Universities and Colleges, Nanning, Guangxi, China","institution_ids":["https://openalex.org/I150807315"]},{"raw_affiliation_string":"School of Computer, Electronic and Information, Guangxi University, Nanning, Guangxi, China","institution_ids":["https://openalex.org/I150807315"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5104667219","display_name":"Hui Sun","orcid":"https://orcid.org/0000-0003-0290-142X"},"institutions":[{"id":"https://openalex.org/I205237279","display_name":"Nankai University","ror":"https://ror.org/01y1kjr75","country_code":"CN","type":"education","lineage":["https://openalex.org/I205237279"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Hui Sun","raw_affiliation_strings":["College of C.S., ICIC, Nankai-Orange D.T. Joint Lab, TMCC, SysNet, Nankai University, Tianjin, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of C.S., ICIC, Nankai-Orange D.T. Joint Lab, TMCC, SysNet, Nankai University, Tianjin, China","institution_ids":["https://openalex.org/I205237279"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5119272086","display_name":"Danyang Chen","orcid":"https://orcid.org/0000-0003-1738-6272"},"institutions":[{"id":"https://openalex.org/I150807315","display_name":"Guangxi University","ror":"https://ror.org/02c9qn167","country_code":"CN","type":"education","lineage":["https://openalex.org/I150807315"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Danyang Chen","raw_affiliation_strings":["Key Laboratory of Parallel, Distributed and Intelligent Computing in Guangxi Universities and Colleges, Nanning, Guangxi, China","School of Computer, Electronic and Information, Guangxi University, Nanning, Guangxi, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Key Laboratory of Parallel, Distributed and Intelligent Computing in Guangxi Universities and Colleges, Nanning, Guangxi, China","institution_ids":["https://openalex.org/I150807315"]},{"raw_affiliation_string":"School of Computer, Electronic and Information, Guangxi University, Nanning, Guangxi, China","institution_ids":["https://openalex.org/I150807315"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5033227324","display_name":"Hai Xiang Lin","orcid":"https://orcid.org/0000-0002-1653-4854"},"institutions":[{"id":"https://openalex.org/I98358874","display_name":"Delft University of Technology","ror":"https://ror.org/02e2c7k09","country_code":"NL","type":"education","lineage":["https://openalex.org/I98358874"]}],"countries":["NL"],"is_corresponding":false,"raw_author_name":"Haixiang Lin","raw_affiliation_strings":["Faculty of Electrical Engineering, Mathematics and Computer Science, Delft University of Technology, Delft, Netherlands"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Faculty of Electrical Engineering, Mathematics and Computer Science, Delft University of Technology, Delft, Netherlands","institution_ids":["https://openalex.org/I98358874"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5101747550"],"corresponding_institution_ids":["https://openalex.org/I150807315"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":2,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"165","last_page":"177"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10434","display_name":"Chromosomal and Genetic Variations","score":0.9983999729156494,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11213","display_name":"Genomic variations and chromosomal abnormalities","score":0.9682999849319458,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/transposable-element","display_name":"Transposable element","score":0.7913426160812378},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7497849464416504},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.6776242256164551},{"id":"https://openalex.org/keywords/element","display_name":"Element (criminal law)","score":0.6608774065971375},{"id":"https://openalex.org/keywords/mobile-genetic-elements","display_name":"Mobile genetic elements","score":0.6504819393157959},{"id":"https://openalex.org/keywords/identity","display_name":"Identity (music)","score":0.5589507818222046},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.46997231245040894},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3319740295410156},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.16499727964401245},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.10465815663337708},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.10052081942558289},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.06610795855522156}],"concepts":[{"id":"https://openalex.org/C4918238","wikidata":"https://www.wikidata.org/wiki/Q121438","display_name":"Transposable element","level":4,"score":0.7913426160812378},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7497849464416504},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.6776242256164551},{"id":"https://openalex.org/C200288055","wikidata":"https://www.wikidata.org/wiki/Q2621792","display_name":"Element (criminal law)","level":2,"score":0.6608774065971375},{"id":"https://openalex.org/C132533263","wikidata":"https://www.wikidata.org/wiki/Q2347362","display_name":"Mobile genetic elements","level":4,"score":0.6504819393157959},{"id":"https://openalex.org/C2778355321","wikidata":"https://www.wikidata.org/wiki/Q17079427","display_name":"Identity (music)","level":2,"score":0.5589507818222046},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.46997231245040894},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3319740295410156},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.16499727964401245},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.10465815663337708},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.10052081942558289},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.06610795855522156},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0},{"id":"https://openalex.org/C24890656","wikidata":"https://www.wikidata.org/wiki/Q82811","display_name":"Acoustics","level":1,"score":0.0},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1007/978-981-99-7074-2_13","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-981-99-7074-2_13","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},{"id":"pmh:oai:tudelft.nl:uuid:4cd69d72-840f-4e7b-8f4a-91f09ab6fc9b","is_oa":false,"landing_page_url":"http://resolver.tudelft.nl/uuid:4cd69d72-840f-4e7b-8f4a-91f09ab6fc9b","pdf_url":null,"source":{"id":"https://openalex.org/S4306400906","display_name":"Research Repository (Delft University of Technology)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I98358874","host_organization_name":"Delft University of Technology","host_organization_lineage":["https://openalex.org/I98358874"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"conference paper"}],"best_oa_location":null,"sustainable_development_goals":[{"display_name":"Life in Land","id":"https://metadata.un.org/sdg/15","score":0.5299999713897705}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":20,"referenced_works":["https://openalex.org/W1680689267","https://openalex.org/W2023132255","https://openalex.org/W2045807857","https://openalex.org/W2141978199","https://openalex.org/W2158251329","https://openalex.org/W2347011735","https://openalex.org/W2682773473","https://openalex.org/W2750782486","https://openalex.org/W2789843538","https://openalex.org/W2913871451","https://openalex.org/W2950121474","https://openalex.org/W2952870794","https://openalex.org/W2990344913","https://openalex.org/W2994632914","https://openalex.org/W3131055609","https://openalex.org/W3175538314","https://openalex.org/W4211115630","https://openalex.org/W4236356242","https://openalex.org/W4361224419","https://openalex.org/W6608097372"],"related_works":["https://openalex.org/W2903782536","https://openalex.org/W158947782","https://openalex.org/W1990380853","https://openalex.org/W2515209839","https://openalex.org/W2120762351","https://openalex.org/W2703590753","https://openalex.org/W1966218777","https://openalex.org/W2263091255","https://openalex.org/W2017029705","https://openalex.org/W1501118784"],"abstract_inverted_index":null,"counts_by_year":[{"year":2025,"cited_by_count":2}],"updated_date":"2026-07-14T23:27:15.235271","created_date":"2025-10-10T00:00:00"}
