{"id":"https://openalex.org/W4416234921","doi":"https://doi.org/10.1007/978-981-95-4381-6_11","title":"A GFlowNet-Based World Model for Structural Protein\u2013Protein Interaction Prediction on DB5","display_name":"A GFlowNet-Based World Model for Structural Protein\u2013Protein Interaction Prediction on DB5","publication_year":2025,"publication_date":"2025-11-15","ids":{"openalex":"https://openalex.org/W4416234921","doi":"https://doi.org/10.1007/978-981-95-4381-6_11"},"language":"en","primary_location":{"id":"doi:10.1007/978-981-95-4381-6_11","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-981-95-4381-6_11","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5039005612","display_name":"Olaide N. Oyelade","orcid":"https://orcid.org/0000-0003-1252-0719"},"institutions":[{"id":"https://openalex.org/I104658917","display_name":"University of Chichester","ror":"https://ror.org/029tw2407","country_code":"GB","type":"education","lineage":["https://openalex.org/I104658917"]},{"id":"https://openalex.org/I35777872","display_name":"North Carolina Agricultural and Technical State University","ror":"https://ror.org/02aze4h65","country_code":"US","type":"education","lineage":["https://openalex.org/I35777872"]}],"countries":["GB","US"],"is_corresponding":true,"raw_author_name":"Olaide Nathaniel Oyelade","raw_affiliation_strings":["College of Science and Technology, North Carolina A&T State University, Greensboro, NC, 27411, USA","Department of Engineering Computing and Mathematics, University of Chichester, Chichester, PO19 6PE, UK"],"affiliations":[{"raw_affiliation_string":"College of Science and Technology, North Carolina A&T State University, Greensboro, NC, 27411, USA","institution_ids":["https://openalex.org/I35777872"]},{"raw_affiliation_string":"Department of Engineering Computing and Mathematics, University of Chichester, Chichester, PO19 6PE, UK","institution_ids":["https://openalex.org/I104658917"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100460917","display_name":"Hui Wang","orcid":"https://orcid.org/0000-0003-2633-6015"},"institutions":[{"id":"https://openalex.org/I126231945","display_name":"Queen's University Belfast","ror":"https://ror.org/00hswnk62","country_code":"GB","type":"education","lineage":["https://openalex.org/I126231945"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Hui Wang","raw_affiliation_strings":["School of Electronics, Electrical Engineering and Computer Science, Queen\u2019s University Belfast, Belfast, UK"],"affiliations":[{"raw_affiliation_string":"School of Electronics, Electrical Engineering and Computer Science, Queen\u2019s University Belfast, Belfast, UK","institution_ids":["https://openalex.org/I126231945"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5039005612"],"corresponding_institution_ids":["https://openalex.org/I104658917","https://openalex.org/I35777872"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.73912116,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"153","last_page":"167"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.4117000102996826,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.4117000102996826,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.2888000011444092,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.1535000056028366,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/generative-grammar","display_name":"Generative grammar","score":0.5856000185012817},{"id":"https://openalex.org/keywords/docking","display_name":"Docking (animal)","score":0.5335999727249146},{"id":"https://openalex.org/keywords/benchmark","display_name":"Benchmark (surveying)","score":0.5318999886512756},{"id":"https://openalex.org/keywords/function","display_name":"Function (biology)","score":0.40389999747276306},{"id":"https://openalex.org/keywords/trajectory","display_name":"Trajectory","score":0.3917999863624573},{"id":"https://openalex.org/keywords/deep-learning","display_name":"Deep learning","score":0.3100999891757965}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8047000169754028},{"id":"https://openalex.org/C39890363","wikidata":"https://www.wikidata.org/wiki/Q36108","display_name":"Generative grammar","level":2,"score":0.5856000185012817},{"id":"https://openalex.org/C41685203","wikidata":"https://www.wikidata.org/wiki/Q1974042","display_name":"Docking (animal)","level":2,"score":0.5335999727249146},{"id":"https://openalex.org/C185798385","wikidata":"https://www.wikidata.org/wiki/Q1161707","display_name":"Benchmark (surveying)","level":2,"score":0.5318999886512756},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5216000080108643},{"id":"https://openalex.org/C14036430","wikidata":"https://www.wikidata.org/wiki/Q3736076","display_name":"Function (biology)","level":2,"score":0.40389999747276306},{"id":"https://openalex.org/C13662910","wikidata":"https://www.wikidata.org/wiki/Q193139","display_name":"Trajectory","level":2,"score":0.3917999863624573},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.36489999294281006},{"id":"https://openalex.org/C108583219","wikidata":"https://www.wikidata.org/wiki/Q197536","display_name":"Deep learning","level":2,"score":0.3100999891757965},{"id":"https://openalex.org/C167966045","wikidata":"https://www.wikidata.org/wiki/Q5532625","display_name":"Generative model","level":3,"score":0.303600013256073},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.3018999993801117},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.2872999906539917},{"id":"https://openalex.org/C66024118","wikidata":"https://www.wikidata.org/wiki/Q1122506","display_name":"Computational model","level":2,"score":0.2816999852657318},{"id":"https://openalex.org/C97541855","wikidata":"https://www.wikidata.org/wiki/Q830687","display_name":"Reinforcement learning","level":2,"score":0.27970001101493835},{"id":"https://openalex.org/C140779682","wikidata":"https://www.wikidata.org/wiki/Q210868","display_name":"Sampling (signal processing)","level":3,"score":0.2728999853134155},{"id":"https://openalex.org/C116887118","wikidata":"https://www.wikidata.org/wiki/Q836685","display_name":"Macromolecular docking","level":3,"score":0.2685999870300293},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.2648000121116638}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1007/978-981-95-4381-6_11","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-981-95-4381-6_11","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},{"id":"pmh:oai:pure.qub.ac.uk/portal:publications/151afa76-8f73-45c1-bc3b-ed72a8cb13bd","is_oa":false,"landing_page_url":"https://pure.qub.ac.uk/en/publications/151afa76-8f73-45c1-bc3b-ed72a8cb13bd","pdf_url":null,"source":{"id":"https://openalex.org/S4306402319","display_name":"Research Portal (Queen's University Belfast)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I126231945","host_organization_name":"Queen's University Belfast","host_organization_lineage":["https://openalex.org/I126231945"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Oyelade, O & Wang, H 2025, A GFlowNet-based world model for structural protein\u2013protein interaction prediction on DB5. in T Taniguchi, C S A Leung, T Kozuno, J Yoshimoto, M Mahmud, M Doborjeh & K Doya (eds), Neural Information Processing: 32nd International Conference, ICONIP 2025: Proceedings. vol. Part 3, Lecture Notes in Computer Science (LNCS), vol. 16311, Springer, pp. 153\u2013167, 32nd International Conference on Neural Information Processing (ICONIP 2025), Okinawa, Japan, 20/11/2025. https://doi.org/10.1007/978-981-95-4381-6_11","raw_type":"info:eu-repo/semantics/conferenceObject"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":16,"referenced_works":["https://openalex.org/W1030883578","https://openalex.org/W2160592148","https://openalex.org/W4220824576","https://openalex.org/W4361218849","https://openalex.org/W4376226129","https://openalex.org/W4378909195","https://openalex.org/W4380873283","https://openalex.org/W4385431175","https://openalex.org/W4387401786","https://openalex.org/W4388653587","https://openalex.org/W4393158392","https://openalex.org/W4400420147","https://openalex.org/W4402948455","https://openalex.org/W4407415190","https://openalex.org/W4410105746","https://openalex.org/W4415428442"],"related_works":[],"abstract_inverted_index":null,"counts_by_year":[],"updated_date":"2026-03-17T09:09:15.849793","created_date":"2025-11-15T00:00:00"}
