{"id":"https://openalex.org/W4412810499","doi":"https://doi.org/10.1007/978-981-95-0698-9_27","title":"TREPP: Tandem Repeat Expansion Pathogenicity Predicting Approach Using Stacked CatBoost Models and\u00a0Multiple Features","display_name":"TREPP: Tandem Repeat Expansion Pathogenicity Predicting Approach Using Stacked CatBoost Models and\u00a0Multiple Features","publication_year":2025,"publication_date":"2025-07-31","ids":{"openalex":"https://openalex.org/W4412810499","doi":"https://doi.org/10.1007/978-981-95-0698-9_27"},"language":"en","primary_location":{"id":"doi:10.1007/978-981-95-0698-9_27","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-981-95-0698-9_27","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5101552818","display_name":"Minghua Xu","orcid":"https://orcid.org/0009-0002-7746-2468"},"institutions":[{"id":"https://openalex.org/I139660479","display_name":"Central South University","ror":"https://ror.org/00f1zfq44","country_code":"CN","type":"education","lineage":["https://openalex.org/I139660479"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Minghua Xu","raw_affiliation_strings":["Hunan Provincial Key Lab on Bioinformatics, Central South University, Changsha, 410083, China","School of Computer Science and Engineering, Central South University, Changsha, 410083, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Hunan Provincial Key Lab on Bioinformatics, Central South University, Changsha, 410083, China","institution_ids":["https://openalex.org/I139660479"]},{"raw_affiliation_string":"School of Computer Science and Engineering, Central South University, Changsha, 410083, China","institution_ids":["https://openalex.org/I139660479"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5114185620","display_name":"Kang Hu","orcid":"https://orcid.org/0009-0002-8971-3404"},"institutions":[{"id":"https://openalex.org/I139660479","display_name":"Central South University","ror":"https://ror.org/00f1zfq44","country_code":"CN","type":"education","lineage":["https://openalex.org/I139660479"]},{"id":"https://openalex.org/I4210114190","display_name":"Shanghai Zhangjiang Laboratory","ror":"https://ror.org/0208qbg77","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4210114190"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Kang Hu","raw_affiliation_strings":["Hunan Provincial Key Lab on Bioinformatics, Central South University, Changsha, 410083, China","School of Computer Science and Engineering, Central South University, Changsha, 410083, China","Xiangjiang Laboratory, Changsha, 410205, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Hunan Provincial Key Lab on Bioinformatics, Central South University, Changsha, 410083, China","institution_ids":["https://openalex.org/I139660479"]},{"raw_affiliation_string":"School of Computer Science and Engineering, Central South University, Changsha, 410083, China","institution_ids":["https://openalex.org/I139660479"]},{"raw_affiliation_string":"Xiangjiang Laboratory, Changsha, 410205, China","institution_ids":["https://openalex.org/I4210114190"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100773554","display_name":"Chao Deng","orcid":"https://orcid.org/0000-0002-5092-5277"},"institutions":[{"id":"https://openalex.org/I139660479","display_name":"Central South University","ror":"https://ror.org/00f1zfq44","country_code":"CN","type":"education","lineage":["https://openalex.org/I139660479"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Chao Deng","raw_affiliation_strings":["Hunan Provincial Key Lab on Bioinformatics, Central South University, Changsha, 410083, China","School of Computer Science and Engineering, Central South University, Changsha, 410083, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Hunan Provincial Key Lab on Bioinformatics, Central South University, Changsha, 410083, China","institution_ids":["https://openalex.org/I139660479"]},{"raw_affiliation_string":"School of Computer Science and Engineering, Central South University, Changsha, 410083, China","institution_ids":["https://openalex.org/I139660479"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101692165","display_name":"Peng Ni","orcid":"https://orcid.org/0000-0002-1232-1245"},"institutions":[{"id":"https://openalex.org/I139660479","display_name":"Central South University","ror":"https://ror.org/00f1zfq44","country_code":"CN","type":"education","lineage":["https://openalex.org/I139660479"]},{"id":"https://openalex.org/I4210114190","display_name":"Shanghai Zhangjiang Laboratory","ror":"https://ror.org/0208qbg77","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4210114190"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Peng Ni","raw_affiliation_strings":["Hunan Provincial Key Lab on Bioinformatics, Central South University, Changsha, 410083, China","School of Computer Science and Engineering, Central South University, Changsha, 410083, China","Xiangjiang Laboratory, Changsha, 410205, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Hunan Provincial Key Lab on Bioinformatics, Central South University, Changsha, 410083, China","institution_ids":["https://openalex.org/I139660479"]},{"raw_affiliation_string":"School of Computer Science and Engineering, Central South University, Changsha, 410083, China","institution_ids":["https://openalex.org/I139660479"]},{"raw_affiliation_string":"Xiangjiang Laboratory, Changsha, 410205, China","institution_ids":["https://openalex.org/I4210114190"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100438345","display_name":"Jianxin Wang","orcid":"https://orcid.org/0000-0001-8621-543X"},"institutions":[{"id":"https://openalex.org/I139660479","display_name":"Central South University","ror":"https://ror.org/00f1zfq44","country_code":"CN","type":"education","lineage":["https://openalex.org/I139660479"]},{"id":"https://openalex.org/I4210114190","display_name":"Shanghai Zhangjiang Laboratory","ror":"https://ror.org/0208qbg77","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4210114190"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jianxin Wang","raw_affiliation_strings":["Hunan Provincial Key Lab on Bioinformatics, Central South University, Changsha, 410083, China","School of Computer Science and Engineering, Central South University, Changsha, 410083, China","Xiangjiang Laboratory, Changsha, 410205, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Hunan Provincial Key Lab on Bioinformatics, Central South University, Changsha, 410083, China","institution_ids":["https://openalex.org/I139660479"]},{"raw_affiliation_string":"School of Computer Science and Engineering, Central South University, Changsha, 410083, China","institution_ids":["https://openalex.org/I139660479"]},{"raw_affiliation_string":"Xiangjiang Laboratory, Changsha, 410205, China","institution_ids":["https://openalex.org/I4210114190"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5114185620"],"corresponding_institution_ids":["https://openalex.org/I139660479","https://openalex.org/I4210114190"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.14159292,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"325","last_page":"336"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10112","display_name":"HIV Research and Treatment","score":0.9883000254631042,"subfield":{"id":"https://openalex.org/subfields/2406","display_name":"Virology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10112","display_name":"HIV Research and Treatment","score":0.9883000254631042,"subfield":{"id":"https://openalex.org/subfields/2406","display_name":"Virology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11970","display_name":"Molecular Biology Techniques and Applications","score":0.988099992275238,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9843000173568726,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7960666418075562},{"id":"https://openalex.org/keywords/tandem","display_name":"Tandem","score":0.630318284034729},{"id":"https://openalex.org/keywords/pathogenicity","display_name":"Pathogenicity","score":0.6012188196182251},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.43214741349220276},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.05419883131980896},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.049568384885787964}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7960666418075562},{"id":"https://openalex.org/C2777814067","wikidata":"https://www.wikidata.org/wiki/Q1752317","display_name":"Tandem","level":2,"score":0.630318284034729},{"id":"https://openalex.org/C64502627","wikidata":"https://www.wikidata.org/wiki/Q170065","display_name":"Pathogenicity","level":2,"score":0.6012188196182251},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.43214741349220276},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.05419883131980896},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.049568384885787964},{"id":"https://openalex.org/C89423630","wikidata":"https://www.wikidata.org/wiki/Q7193","display_name":"Microbiology","level":1,"score":0.0},{"id":"https://openalex.org/C146978453","wikidata":"https://www.wikidata.org/wiki/Q3798668","display_name":"Aerospace engineering","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/978-981-95-0698-9_27","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-981-95-0698-9_27","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":30,"referenced_works":["https://openalex.org/W1587454308","https://openalex.org/W1985714764","https://openalex.org/W1991342096","https://openalex.org/W1993220166","https://openalex.org/W2019043328","https://openalex.org/W2021091954","https://openalex.org/W2112814753","https://openalex.org/W2131173813","https://openalex.org/W2139353300","https://openalex.org/W2168909179","https://openalex.org/W2171787842","https://openalex.org/W2295598076","https://openalex.org/W2768348081","https://openalex.org/W2786119759","https://openalex.org/W2798476254","https://openalex.org/W2949676527","https://openalex.org/W3012810328","https://openalex.org/W3084286709","https://openalex.org/W3105352306","https://openalex.org/W3157369800","https://openalex.org/W3161326944","https://openalex.org/W3165653844","https://openalex.org/W4205727616","https://openalex.org/W4360947430","https://openalex.org/W4390507628","https://openalex.org/W4391380715","https://openalex.org/W4392644889","https://openalex.org/W4393995286","https://openalex.org/W4398219245","https://openalex.org/W4404535307"],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2899084033","https://openalex.org/W2748952813","https://openalex.org/W4323262585","https://openalex.org/W2023186083","https://openalex.org/W4211086969","https://openalex.org/W2890607860","https://openalex.org/W2025127327","https://openalex.org/W2519652201","https://openalex.org/W2154144052"],"abstract_inverted_index":null,"counts_by_year":[],"updated_date":"2026-07-29T14:22:42.915294","created_date":"2025-10-10T00:00:00"}
