{"id":"https://openalex.org/W4412807139","doi":"https://doi.org/10.1007/978-981-95-0695-8_5","title":"PrePSL: A Pre-training Method for\u00a0Protein Subcellular Localization Using Graph Auto-encoder and\u00a0Protein Language Model","display_name":"PrePSL: A Pre-training Method for\u00a0Protein Subcellular Localization Using Graph Auto-encoder and\u00a0Protein Language Model","publication_year":2025,"publication_date":"2025-07-31","ids":{"openalex":"https://openalex.org/W4412807139","doi":"https://doi.org/10.1007/978-981-95-0695-8_5"},"language":"en","primary_location":{"id":"doi:10.1007/978-981-95-0695-8_5","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-981-95-0695-8_5","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5042805146","display_name":"Shicheng Ma","orcid":null},"institutions":[{"id":"https://openalex.org/I96908189","display_name":"Xinjiang University","ror":"https://ror.org/059gw8r13","country_code":"CN","type":"education","lineage":["https://openalex.org/I96908189"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Shicheng Ma","raw_affiliation_strings":["College of Software, Xinjiang University, Urumqi, 830046, China"],"affiliations":[{"raw_affiliation_string":"College of Software, Xinjiang University, Urumqi, 830046, China","institution_ids":["https://openalex.org/I96908189"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5114098308","display_name":"Weiyang Liang","orcid":null},"institutions":[{"id":"https://openalex.org/I96908189","display_name":"Xinjiang University","ror":"https://ror.org/059gw8r13","country_code":"CN","type":"education","lineage":["https://openalex.org/I96908189"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Weiyang Liang","raw_affiliation_strings":["College of Computer Science and Technology, Xinjiang University, Urumqi, 830046, China"],"affiliations":[{"raw_affiliation_string":"College of Computer Science and Technology, Xinjiang University, Urumqi, 830046, China","institution_ids":["https://openalex.org/I96908189"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5012251323","display_name":"Kai Zhao","orcid":"https://orcid.org/0000-0002-5159-2312"},"institutions":[{"id":"https://openalex.org/I96908189","display_name":"Xinjiang University","ror":"https://ror.org/059gw8r13","country_code":"CN","type":"education","lineage":["https://openalex.org/I96908189"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Kai Zhao","raw_affiliation_strings":["College of Computer Science and Technology, Xinjiang University, Urumqi, 830046, China"],"affiliations":[{"raw_affiliation_string":"College of Computer Science and Technology, Xinjiang University, Urumqi, 830046, China","institution_ids":["https://openalex.org/I96908189"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5036241949","display_name":"Xuehua Bi","orcid":"https://orcid.org/0009-0004-4861-1588"},"institutions":[{"id":"https://openalex.org/I154093214","display_name":"Xinjiang Medical University","ror":"https://ror.org/01p455v08","country_code":"CN","type":"education","lineage":["https://openalex.org/I154093214"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xuehua Bi","raw_affiliation_strings":["College of Medical Engineering and Technology, Xinjiang Medical University, Urumqi, 830017, China","Institute of Medical Engineering Interdisciplinary Research, Xinjiang Medical University, Urumqi, 830017, China"],"affiliations":[{"raw_affiliation_string":"College of Medical Engineering and Technology, Xinjiang Medical University, Urumqi, 830017, China","institution_ids":["https://openalex.org/I154093214"]},{"raw_affiliation_string":"Institute of Medical Engineering Interdisciplinary Research, Xinjiang Medical University, Urumqi, 830017, China","institution_ids":["https://openalex.org/I154093214"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100437402","display_name":"Linlin Zhang","orcid":"https://orcid.org/0000-0003-3240-1215"},"institutions":[{"id":"https://openalex.org/I96908189","display_name":"Xinjiang University","ror":"https://ror.org/059gw8r13","country_code":"CN","type":"education","lineage":["https://openalex.org/I96908189"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Linlin Zhang","raw_affiliation_strings":["Center of Network and Information Technology, Xinjiang University, Urumqi, 830046, China","College of Software, Xinjiang University, Urumqi, 830046, China"],"affiliations":[{"raw_affiliation_string":"Center of Network and Information Technology, Xinjiang University, Urumqi, 830046, China","institution_ids":["https://openalex.org/I96908189"]},{"raw_affiliation_string":"College of Software, Xinjiang University, Urumqi, 830046, China","institution_ids":["https://openalex.org/I96908189"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5042805146"],"corresponding_institution_ids":["https://openalex.org/I96908189"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.35306461,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"49","last_page":"60"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9980000257492065,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.996399998664856,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8046316504478455},{"id":"https://openalex.org/keywords/graph","display_name":"Graph","score":0.5671557784080505},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.4652387201786041},{"id":"https://openalex.org/keywords/protein-subcellular-localization-prediction","display_name":"Protein subcellular localization prediction","score":0.4561258554458618},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.3936395049095154},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.2992521822452545},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.1219983696937561},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.10240283608436584},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.07330110669136047}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8046316504478455},{"id":"https://openalex.org/C132525143","wikidata":"https://www.wikidata.org/wiki/Q141488","display_name":"Graph","level":2,"score":0.5671557784080505},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.4652387201786041},{"id":"https://openalex.org/C140051345","wikidata":"https://www.wikidata.org/wiki/Q7251501","display_name":"Protein subcellular localization prediction","level":3,"score":0.4561258554458618},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.3936395049095154},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.2992521822452545},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.1219983696937561},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.10240283608436584},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.07330110669136047}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/978-981-95-0695-8_5","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-981-95-0695-8_5","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":30,"referenced_works":["https://openalex.org/W1888005072","https://openalex.org/W2031321072","https://openalex.org/W2154851992","https://openalex.org/W2612872092","https://openalex.org/W2793168264","https://openalex.org/W2900490197","https://openalex.org/W2962756421","https://openalex.org/W2985388048","https://openalex.org/W3047361096","https://openalex.org/W3047995329","https://openalex.org/W3104097132","https://openalex.org/W3124088661","https://openalex.org/W3146944767","https://openalex.org/W3163867547","https://openalex.org/W3177500196","https://openalex.org/W3206171364","https://openalex.org/W4223414650","https://openalex.org/W4225832925","https://openalex.org/W4290876361","https://openalex.org/W4290999177","https://openalex.org/W4308834893","https://openalex.org/W4312533084","https://openalex.org/W4313525385","https://openalex.org/W4327550249","https://openalex.org/W4385567478","https://openalex.org/W4388515776","https://openalex.org/W4393235963","https://openalex.org/W4396873165","https://openalex.org/W4402883705","https://openalex.org/W4408219684"],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2899084033","https://openalex.org/W2748952813","https://openalex.org/W2390279801","https://openalex.org/W4391913857","https://openalex.org/W2358668433","https://openalex.org/W4396701345","https://openalex.org/W2376932109","https://openalex.org/W2001405890","https://openalex.org/W3204019825"],"abstract_inverted_index":null,"counts_by_year":[],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
