{"id":"https://openalex.org/W3000859189","doi":"https://doi.org/10.1007/978-981-15-2767-8_28","title":"GPU-Accelerated Parallel Aligning Long Reads with High Error Rate Using Enhanced Sparse Suffix Array","display_name":"GPU-Accelerated Parallel Aligning Long Reads with High Error Rate Using Enhanced Sparse Suffix Array","publication_year":2020,"publication_date":"2020-01-01","ids":{"openalex":"https://openalex.org/W3000859189","doi":"https://doi.org/10.1007/978-981-15-2767-8_28","mag":"3000859189"},"language":"en","primary_location":{"id":"doi:10.1007/978-981-15-2767-8_28","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-981-15-2767-8_28","pdf_url":null,"source":{"id":"https://openalex.org/S2764900261","display_name":"Communications in computer and information science","issn_l":"1865-0929","issn":["1865-0929","1865-0937"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Communications in Computer and Information Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5076915763","display_name":"Hao Wei","orcid":"https://orcid.org/0000-0001-6307-7118"},"institutions":[{"id":"https://openalex.org/I150807315","display_name":"Guangxi University","ror":"https://ror.org/02c9qn167","country_code":"CN","type":"education","lineage":["https://openalex.org/I150807315"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Hao Wei","raw_affiliation_strings":["School of Computer, Electronics and Information, Guangxi University, Nanning, 530004, Guangxi, China"],"affiliations":[{"raw_affiliation_string":"School of Computer, Electronics and Information, Guangxi University, Nanning, 530004, Guangxi, China","institution_ids":["https://openalex.org/I150807315"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101747550","display_name":"Cheng Zhong","orcid":"https://orcid.org/0000-0002-5560-2151"},"institutions":[{"id":"https://openalex.org/I150807315","display_name":"Guangxi University","ror":"https://ror.org/02c9qn167","country_code":"CN","type":"education","lineage":["https://openalex.org/I150807315"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Cheng Zhong","raw_affiliation_strings":["School of Computer, Electronics and Information, Guangxi University, Nanning, 530004, Guangxi, China"],"affiliations":[{"raw_affiliation_string":"School of Computer, Electronics and Information, Guangxi University, Nanning, 530004, Guangxi, China","institution_ids":["https://openalex.org/I150807315"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100652781","display_name":"Danyang Chen","orcid":"https://orcid.org/0009-0006-2124-6845"},"institutions":[{"id":"https://openalex.org/I150807315","display_name":"Guangxi University","ror":"https://ror.org/02c9qn167","country_code":"CN","type":"education","lineage":["https://openalex.org/I150807315"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Danyang Chen","raw_affiliation_strings":["School of Computer, Electronics and Information, Guangxi University, Nanning, 530004, Guangxi, China"],"affiliations":[{"raw_affiliation_string":"School of Computer, Electronics and Information, Guangxi University, Nanning, 530004, Guangxi, China","institution_ids":["https://openalex.org/I150807315"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5104039802","display_name":"Mengxiao Yin","orcid":null},"institutions":[{"id":"https://openalex.org/I150807315","display_name":"Guangxi University","ror":"https://ror.org/02c9qn167","country_code":"CN","type":"education","lineage":["https://openalex.org/I150807315"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Mengxiao Yin","raw_affiliation_strings":["School of Computer, Electronics and Information, Guangxi University, Nanning, 530004, Guangxi, China"],"affiliations":[{"raw_affiliation_string":"School of Computer, Electronics and Information, Guangxi University, Nanning, 530004, Guangxi, China","institution_ids":["https://openalex.org/I150807315"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5049834143","display_name":"Jinxiong Zhang","orcid":"https://orcid.org/0000-0002-8733-4622"},"institutions":[{"id":"https://openalex.org/I150807315","display_name":"Guangxi University","ror":"https://ror.org/02c9qn167","country_code":"CN","type":"education","lineage":["https://openalex.org/I150807315"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jinxiong Zhang","raw_affiliation_strings":["School of Computer, Electronics and Information, Guangxi University, Nanning, 530004, Guangxi, China"],"affiliations":[{"raw_affiliation_string":"School of Computer, Electronics and Information, Guangxi University, Nanning, 530004, Guangxi, China","institution_ids":["https://openalex.org/I150807315"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5076915763"],"corresponding_institution_ids":["https://openalex.org/I150807315"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.01784786,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"311","last_page":"319"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9983999729156494,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9729999899864197,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/suffix-array","display_name":"Suffix array","score":0.9244723320007324},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8320611119270325},{"id":"https://openalex.org/keywords/compressed-suffix-array","display_name":"Compressed suffix array","score":0.6069637537002563},{"id":"https://openalex.org/keywords/parallel-computing","display_name":"Parallel computing","score":0.5839765071868896},{"id":"https://openalex.org/keywords/suffix","display_name":"Suffix","score":0.5403438210487366},{"id":"https://openalex.org/keywords/selection","display_name":"Selection (genetic algorithm)","score":0.4600607454776764},{"id":"https://openalex.org/keywords/suffix-tree","display_name":"Suffix tree","score":0.43113061785697937},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.42492133378982544},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.41347622871398926},{"id":"https://openalex.org/keywords/data-structure","display_name":"Data structure","score":0.3824666738510132},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.19245275855064392}],"concepts":[{"id":"https://openalex.org/C2779259728","wikidata":"https://www.wikidata.org/wiki/Q281472","display_name":"Suffix array","level":3,"score":0.9244723320007324},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8320611119270325},{"id":"https://openalex.org/C100903775","wikidata":"https://www.wikidata.org/wiki/Q5157028","display_name":"Compressed suffix array","level":4,"score":0.6069637537002563},{"id":"https://openalex.org/C173608175","wikidata":"https://www.wikidata.org/wiki/Q232661","display_name":"Parallel computing","level":1,"score":0.5839765071868896},{"id":"https://openalex.org/C2779804580","wikidata":"https://www.wikidata.org/wiki/Q102047","display_name":"Suffix","level":2,"score":0.5403438210487366},{"id":"https://openalex.org/C81917197","wikidata":"https://www.wikidata.org/wiki/Q628760","display_name":"Selection (genetic algorithm)","level":2,"score":0.4600607454776764},{"id":"https://openalex.org/C2781166958","wikidata":"https://www.wikidata.org/wiki/Q1426863","display_name":"Suffix tree","level":3,"score":0.43113061785697937},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.42492133378982544},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.41347622871398926},{"id":"https://openalex.org/C162319229","wikidata":"https://www.wikidata.org/wiki/Q175263","display_name":"Data structure","level":2,"score":0.3824666738510132},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.19245275855064392},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.0},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/978-981-15-2767-8_28","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-981-15-2767-8_28","pdf_url":null,"source":{"id":"https://openalex.org/S2764900261","display_name":"Communications in computer and information science","issn_l":"1865-0929","issn":["1865-0929","1865-0937"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Communications in Computer and Information Science","raw_type":"book-chapter"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":11,"referenced_works":["https://openalex.org/W1978049818","https://openalex.org/W1979994831","https://openalex.org/W2107824361","https://openalex.org/W2109982529","https://openalex.org/W2117683095","https://openalex.org/W2125418992","https://openalex.org/W2145186114","https://openalex.org/W2318181254","https://openalex.org/W2604364312","https://openalex.org/W2781907349","https://openalex.org/W2788876413"],"related_works":["https://openalex.org/W153119118","https://openalex.org/W2003608043","https://openalex.org/W2583658747","https://openalex.org/W2405892617","https://openalex.org/W1486336060","https://openalex.org/W2158874082","https://openalex.org/W1575722140","https://openalex.org/W4293529780","https://openalex.org/W2049350043","https://openalex.org/W1498395615"],"abstract_inverted_index":null,"counts_by_year":[],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
