{"id":"https://openalex.org/W2499921134","doi":"https://doi.org/10.1007/978-981-10-1128-3_4","title":"Optimizing Molecular Models Through Force-Field Parameterization via the Efficient Combination of Modular Program Packages","display_name":"Optimizing Molecular Models Through Force-Field Parameterization via the Efficient Combination of Modular Program Packages","publication_year":2016,"publication_date":"2016-01-01","ids":{"openalex":"https://openalex.org/W2499921134","doi":"https://doi.org/10.1007/978-981-10-1128-3_4","mag":"2499921134"},"language":"en","primary_location":{"id":"doi:10.1007/978-981-10-1128-3_4","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-981-10-1128-3_4","pdf_url":null,"source":{"id":"https://openalex.org/S4210185952","display_name":"Molecular modeling and simulation","issn_l":"2364-5083","issn":["2364-5083","2364-5091"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319965","host_organization_name":"Springer Nature","host_organization_lineage":["https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Molecular Modeling and Simulation","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5091849960","display_name":"Marco H\u00fclsmann","orcid":null},"institutions":[{"id":"https://openalex.org/I155417937","display_name":"Hochschule Bonn-Rhein-Sieg","ror":"https://ror.org/04m2anh63","country_code":"DE","type":"education","lineage":["https://openalex.org/I155417937"]},{"id":"https://openalex.org/I4210098248","display_name":"Fraunhofer Institute for Algorithms and Scientific Computing","ror":"https://ror.org/00trw9c49","country_code":"DE","type":"facility","lineage":["https://openalex.org/I4210098248","https://openalex.org/I4923324"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"Marco H\u00fclsmann","raw_affiliation_strings":["Department of Mechanical Engineering (EMT) and Institute for Technology, Renewables and Energy Efficiency (TREE), Bonn-Rhein-Sieg University of Applied Sciences, Grantham-Allee 20, 53757, Sankt Augustin, Germany","Department of Simulation Engineering, Fraunhofer-Institute for Algorithms and Scientific Computing (SCAI), Schloss Birlinghoven, 53757, Sankt Augustin, Germany"],"affiliations":[{"raw_affiliation_string":"Department of Mechanical Engineering (EMT) and Institute for Technology, Renewables and Energy Efficiency (TREE), Bonn-Rhein-Sieg University of Applied Sciences, Grantham-Allee 20, 53757, Sankt Augustin, Germany","institution_ids":["https://openalex.org/I155417937"]},{"raw_affiliation_string":"Department of Simulation Engineering, Fraunhofer-Institute for Algorithms and Scientific Computing (SCAI), Schloss Birlinghoven, 53757, Sankt Augustin, Germany","institution_ids":["https://openalex.org/I4210098248"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5000728064","display_name":"Karl N. Kirschner","orcid":"https://orcid.org/0000-0002-4581-920X"},"institutions":[{"id":"https://openalex.org/I155417937","display_name":"Hochschule Bonn-Rhein-Sieg","ror":"https://ror.org/04m2anh63","country_code":"DE","type":"education","lineage":["https://openalex.org/I155417937"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Karl N. Kirschner","raw_affiliation_strings":["Department of Computer Science and the Institute of Visual Computing (IVC), Bonn-Rhein-Sieg University of Applied Sciences, Grantham-Allee 20, 53757, Sankt Augustin, Germany"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and the Institute of Visual Computing (IVC), Bonn-Rhein-Sieg University of Applied Sciences, Grantham-Allee 20, 53757, Sankt Augustin, Germany","institution_ids":["https://openalex.org/I155417937"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5074102184","display_name":"Andreas Kr\u00e4mer","orcid":"https://orcid.org/0000-0002-7699-3083"},"institutions":[{"id":"https://openalex.org/I155417937","display_name":"Hochschule Bonn-Rhein-Sieg","ror":"https://ror.org/04m2anh63","country_code":"DE","type":"education","lineage":["https://openalex.org/I155417937"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Andreas Kr\u00e4mer","raw_affiliation_strings":["Department of Mechanical Engineering (EMT) and Institute for Technology, Renewables and Energy Efficiency (TREE), Bonn-Rhein-Sieg University of Applied Sciences, Grantham-Allee 20, 53757, Sankt Augustin, Germany"],"affiliations":[{"raw_affiliation_string":"Department of Mechanical Engineering (EMT) and Institute for Technology, Renewables and Energy Efficiency (TREE), Bonn-Rhein-Sieg University of Applied Sciences, Grantham-Allee 20, 53757, Sankt Augustin, Germany","institution_ids":["https://openalex.org/I155417937"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5037333641","display_name":"Doron D. Heinrich","orcid":null},"institutions":[{"id":"https://openalex.org/I155417937","display_name":"Hochschule Bonn-Rhein-Sieg","ror":"https://ror.org/04m2anh63","country_code":"DE","type":"education","lineage":["https://openalex.org/I155417937"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Doron D. Heinrich","raw_affiliation_strings":["Department of Mechanical Engineering (EMT) and Institute for Technology, Renewables and Energy Efficiency (TREE), Bonn-Rhein-Sieg University of Applied Sciences, Grantham-Allee 20, 53757, Sankt Augustin, Germany"],"affiliations":[{"raw_affiliation_string":"Department of Mechanical Engineering (EMT) and Institute for Technology, Renewables and Energy Efficiency (TREE), Bonn-Rhein-Sieg University of Applied Sciences, Grantham-Allee 20, 53757, Sankt Augustin, Germany","institution_ids":["https://openalex.org/I155417937"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5057945168","display_name":"Ottmar Kr\u00e4mer-Fuhrmann","orcid":null},"institutions":[{"id":"https://openalex.org/I4210098248","display_name":"Fraunhofer Institute for Algorithms and Scientific Computing","ror":"https://ror.org/00trw9c49","country_code":"DE","type":"facility","lineage":["https://openalex.org/I4210098248","https://openalex.org/I4923324"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Ottmar Kr\u00e4mer-Fuhrmann","raw_affiliation_strings":["Department of Simulation Engineering, Fraunhofer-Institute for Algorithms and Scientific Computing (SCAI), Schloss Birlinghoven, 53757, Sankt Augustin, Germany"],"affiliations":[{"raw_affiliation_string":"Department of Simulation Engineering, Fraunhofer-Institute for Algorithms and Scientific Computing (SCAI), Schloss Birlinghoven, 53757, Sankt Augustin, Germany","institution_ids":["https://openalex.org/I4210098248"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5032491527","display_name":"Dirk Reith","orcid":"https://orcid.org/0000-0003-1480-6745"},"institutions":[{"id":"https://openalex.org/I155417937","display_name":"Hochschule Bonn-Rhein-Sieg","ror":"https://ror.org/04m2anh63","country_code":"DE","type":"education","lineage":["https://openalex.org/I155417937"]},{"id":"https://openalex.org/I4210098248","display_name":"Fraunhofer Institute for Algorithms and Scientific Computing","ror":"https://ror.org/00trw9c49","country_code":"DE","type":"facility","lineage":["https://openalex.org/I4210098248","https://openalex.org/I4923324"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Dirk Reith","raw_affiliation_strings":["Department of Mechanical Engineering (EMT) and Institute for Technology, Renewables and Energy Efficiency (TREE), Bonn-Rhein-Sieg University of Applied Sciences, Grantham-Allee 20, 53757, Sankt Augustin, Germany","Department of Simulation Engineering, Fraunhofer-Institute for Algorithms and Scientific Computing (SCAI), Schloss Birlinghoven, 53757, Sankt Augustin, Germany"],"affiliations":[{"raw_affiliation_string":"Department of Mechanical Engineering (EMT) and Institute for Technology, Renewables and Energy Efficiency (TREE), Bonn-Rhein-Sieg University of Applied Sciences, Grantham-Allee 20, 53757, Sankt Augustin, Germany","institution_ids":["https://openalex.org/I155417937"]},{"raw_affiliation_string":"Department of Simulation Engineering, Fraunhofer-Institute for Algorithms and Scientific Computing (SCAI), Schloss Birlinghoven, 53757, Sankt Augustin, Germany","institution_ids":["https://openalex.org/I4210098248"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5091849960"],"corresponding_institution_ids":["https://openalex.org/I155417937","https://openalex.org/I4210098248"],"apc_list":null,"apc_paid":null,"fwci":4.8405,"has_fulltext":false,"cited_by_count":17,"citation_normalized_percentile":{"value":0.95122592,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":null,"issue":null,"first_page":"53","last_page":"77"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11162","display_name":"Enzyme Structure and Function","score":0.9987000226974487,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11948","display_name":"Machine Learning in Materials Science","score":0.9979000091552734,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/modular-design","display_name":"Modular design","score":0.7558742761611938},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7086241245269775},{"id":"https://openalex.org/keywords/workflow","display_name":"Workflow","score":0.5881025195121765},{"id":"https://openalex.org/keywords/scripting-language","display_name":"Scripting language","score":0.5737607479095459},{"id":"https://openalex.org/keywords/force-field","display_name":"Force field (fiction)","score":0.5545175671577454},{"id":"https://openalex.org/keywords/field","display_name":"Field (mathematics)","score":0.5276882648468018},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.18388938903808594},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.11593309044837952},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.09614047408103943}],"concepts":[{"id":"https://openalex.org/C101468663","wikidata":"https://www.wikidata.org/wiki/Q1620158","display_name":"Modular design","level":2,"score":0.7558742761611938},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7086241245269775},{"id":"https://openalex.org/C177212765","wikidata":"https://www.wikidata.org/wiki/Q627335","display_name":"Workflow","level":2,"score":0.5881025195121765},{"id":"https://openalex.org/C61423126","wikidata":"https://www.wikidata.org/wiki/Q187432","display_name":"Scripting language","level":2,"score":0.5737607479095459},{"id":"https://openalex.org/C10803110","wikidata":"https://www.wikidata.org/wiki/Q1341441","display_name":"Force field (fiction)","level":2,"score":0.5545175671577454},{"id":"https://openalex.org/C9652623","wikidata":"https://www.wikidata.org/wiki/Q190109","display_name":"Field (mathematics)","level":2,"score":0.5276882648468018},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.18388938903808594},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.11593309044837952},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.09614047408103943},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.0},{"id":"https://openalex.org/C202444582","wikidata":"https://www.wikidata.org/wiki/Q837863","display_name":"Pure mathematics","level":1,"score":0.0}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.1007/978-981-10-1128-3_4","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-981-10-1128-3_4","pdf_url":null,"source":{"id":"https://openalex.org/S4210185952","display_name":"Molecular modeling and simulation","issn_l":"2364-5083","issn":["2364-5083","2364-5091"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319965","host_organization_name":"Springer Nature","host_organization_lineage":["https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Molecular Modeling and Simulation","raw_type":"book-chapter"},{"id":"pmh:oai:fraunhofer.de:N-399825","is_oa":false,"landing_page_url":"http://publica.fraunhofer.de/documents/N-399825.html","pdf_url":null,"source":{"id":"https://openalex.org/S4306400801","display_name":"Publikationsdatenbank der Fraunhofer-Gesellschaft (Fraunhofer-Gesellschaft)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4923324","host_organization_name":"Fraunhofer-Gesellschaft","host_organization_lineage":["https://openalex.org/I4923324"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Fraunhofer SCAI","raw_type":"conferenceObject"},{"id":"pmh:oai:pub.h-brs.de:2509","is_oa":false,"landing_page_url":"https://pub.h-brs.de/frontdoor/index/index/docId/2509","pdf_url":null,"source":{"id":"https://openalex.org/S4306400385","display_name":"Publication Server of Bonn-Rhein-Sieg University of Applied Sciences (Bonn-Rhein-Sieg University of Applied Sciences)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I135140700","host_organization_name":"University of Bonn","host_organization_lineage":["https://openalex.org/I135140700"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Snurr, Adjiman et al. (Eds.): Foundations of molecular modeling and simulation. Select papers from FOMMS 2015","raw_type":"doc-type:conferenceobject"},{"id":"pmh:oai:publica.fraunhofer.de:publica/392329","is_oa":false,"landing_page_url":"https://publica.fraunhofer.de/handle/publica/392329","pdf_url":null,"source":{"id":"https://openalex.org/S4306400318","display_name":"Fraunhofer-Publica (Fraunhofer-Gesellschaft)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4923324","host_organization_name":"Fraunhofer-Gesellschaft","host_organization_lineage":["https://openalex.org/I4923324"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"conference paper"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":88,"referenced_works":["https://openalex.org/W8742019","https://openalex.org/W762198337","https://openalex.org/W782978949","https://openalex.org/W1527277989","https://openalex.org/W1559700605","https://openalex.org/W1590477524","https://openalex.org/W1963934438","https://openalex.org/W1965838279","https://openalex.org/W1968779717","https://openalex.org/W1976851949","https://openalex.org/W1977859089","https://openalex.org/W1978886491","https://openalex.org/W1981360001","https://openalex.org/W1985940938","https://openalex.org/W1990312030","https://openalex.org/W1991238097","https://openalex.org/W1991655565","https://openalex.org/W1994615485","https://openalex.org/W1994757034","https://openalex.org/W1997869834","https://openalex.org/W2010379634","https://openalex.org/W2014118668","https://openalex.org/W2016106686","https://openalex.org/W2017918436","https://openalex.org/W2019240884","https://openalex.org/W2019465613","https://openalex.org/W2020828286","https://openalex.org/W2025461625","https://openalex.org/W2029753005","https://openalex.org/W2031107710","https://openalex.org/W2044931685","https://openalex.org/W2045596349","https://openalex.org/W2048421166","https://openalex.org/W2053363788","https://openalex.org/W2054960234","https://openalex.org/W2058191353","https://openalex.org/W2058363175","https://openalex.org/W2061086766","https://openalex.org/W2067687494","https://openalex.org/W2069006374","https://openalex.org/W2071143994","https://openalex.org/W2072537419","https://openalex.org/W2075270754","https://openalex.org/W2078402834","https://openalex.org/W2079448365","https://openalex.org/W2080240101","https://openalex.org/W2082581179","https://openalex.org/W2087917487","https://openalex.org/W2091021790","https://openalex.org/W2094866743","https://openalex.org/W2096326804","https://openalex.org/W2098943363","https://openalex.org/W2101926821","https://openalex.org/W2102198189","https://openalex.org/W2103032510","https://openalex.org/W2111917512","https://openalex.org/W2112953039","https://openalex.org/W2115570304","https://openalex.org/W2115641113","https://openalex.org/W2116382882","https://openalex.org/W2119822810","https://openalex.org/W2122825543","https://openalex.org/W2126754493","https://openalex.org/W2127522551","https://openalex.org/W2132262459","https://openalex.org/W2137605538","https://openalex.org/W2138745038","https://openalex.org/W2141334807","https://openalex.org/W2143756872","https://openalex.org/W2144048874","https://openalex.org/W2147993766","https://openalex.org/W2150789776","https://openalex.org/W2159565091","https://openalex.org/W2162352426","https://openalex.org/W2166035999","https://openalex.org/W2166943899","https://openalex.org/W2169678694","https://openalex.org/W2311078281","https://openalex.org/W2323104785","https://openalex.org/W2335359305","https://openalex.org/W2404280981","https://openalex.org/W2482655391","https://openalex.org/W2768072658","https://openalex.org/W2950089155","https://openalex.org/W2962861441","https://openalex.org/W4232056991","https://openalex.org/W4293775970","https://openalex.org/W6815259738"],"related_works":["https://openalex.org/W2046765700","https://openalex.org/W4384345686","https://openalex.org/W1981780420","https://openalex.org/W2182707996","https://openalex.org/W2357937784","https://openalex.org/W45233828","https://openalex.org/W2964988449","https://openalex.org/W2547618384","https://openalex.org/W4394391052","https://openalex.org/W2145834781"],"abstract_inverted_index":null,"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":4},{"year":2019,"cited_by_count":2},{"year":2018,"cited_by_count":2},{"year":2017,"cited_by_count":2},{"year":2016,"cited_by_count":3}],"updated_date":"2026-04-05T17:49:38.594831","created_date":"2025-10-10T00:00:00"}
