{"id":"https://openalex.org/W616987689","doi":"https://doi.org/10.1007/978-3-662-48221-6_16","title":"Bloom Filter Trie \u2013 A Data Structure for Pan-Genome Storage","display_name":"Bloom Filter Trie \u2013 A Data Structure for Pan-Genome Storage","publication_year":2015,"publication_date":"2015-01-01","ids":{"openalex":"https://openalex.org/W616987689","doi":"https://doi.org/10.1007/978-3-662-48221-6_16","mag":"616987689"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-662-48221-6_16","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-662-48221-6_16","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5060291070","display_name":"Guillaume Holley","orcid":null},"institutions":[{"id":"https://openalex.org/I20121455","display_name":"Bielefeld University","ror":"https://ror.org/02hpadn98","country_code":"DE","type":"education","lineage":["https://openalex.org/I20121455"]},{"id":"https://openalex.org/I203082224","display_name":"Hochschule Bielefeld","ror":"https://ror.org/00edvg943","country_code":"DE","type":"education","lineage":["https://openalex.org/I203082224"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"Guillaume Holley","raw_affiliation_strings":["Center for Biotechnology, Bielefeld University, Bielefeld, Germany","Genome Informatics, Faculty of Technology, Bielefeld University, Bielefeld, Germany","International Research Training Group 1906, Bielefeld University, Bielefeld, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Biotechnology, Bielefeld University, Bielefeld, Germany","institution_ids":["https://openalex.org/I20121455"]},{"raw_affiliation_string":"Genome Informatics, Faculty of Technology, Bielefeld University, Bielefeld, Germany","institution_ids":["https://openalex.org/I20121455"]},{"raw_affiliation_string":"International Research Training Group 1906, Bielefeld University, Bielefeld, Germany","institution_ids":["https://openalex.org/I20121455","https://openalex.org/I203082224"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5062211046","display_name":"Roland Wittler","orcid":"https://orcid.org/0000-0002-2249-9880"},"institutions":[{"id":"https://openalex.org/I20121455","display_name":"Bielefeld University","ror":"https://ror.org/02hpadn98","country_code":"DE","type":"education","lineage":["https://openalex.org/I20121455"]},{"id":"https://openalex.org/I203082224","display_name":"Hochschule Bielefeld","ror":"https://ror.org/00edvg943","country_code":"DE","type":"education","lineage":["https://openalex.org/I203082224"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Roland Wittler","raw_affiliation_strings":["Center for Biotechnology, Bielefeld University, Bielefeld, Germany","Genome Informatics, Faculty of Technology, Bielefeld University, Bielefeld, Germany","International Research Training Group 1906, Bielefeld University, Bielefeld, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Biotechnology, Bielefeld University, Bielefeld, Germany","institution_ids":["https://openalex.org/I20121455"]},{"raw_affiliation_string":"Genome Informatics, Faculty of Technology, Bielefeld University, Bielefeld, Germany","institution_ids":["https://openalex.org/I20121455"]},{"raw_affiliation_string":"International Research Training Group 1906, Bielefeld University, Bielefeld, Germany","institution_ids":["https://openalex.org/I20121455","https://openalex.org/I203082224"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5019771245","display_name":"Jens Stoye","orcid":"https://orcid.org/0000-0002-4656-7155"},"institutions":[{"id":"https://openalex.org/I20121455","display_name":"Bielefeld University","ror":"https://ror.org/02hpadn98","country_code":"DE","type":"education","lineage":["https://openalex.org/I20121455"]},{"id":"https://openalex.org/I203082224","display_name":"Hochschule Bielefeld","ror":"https://ror.org/00edvg943","country_code":"DE","type":"education","lineage":["https://openalex.org/I203082224"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Jens Stoye","raw_affiliation_strings":["Center for Biotechnology, Bielefeld University, Bielefeld, Germany","Genome Informatics, Faculty of Technology, Bielefeld University, Bielefeld, Germany","International Research Training Group 1906, Bielefeld University, Bielefeld, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Biotechnology, Bielefeld University, Bielefeld, Germany","institution_ids":["https://openalex.org/I20121455"]},{"raw_affiliation_string":"Genome Informatics, Faculty of Technology, Bielefeld University, Bielefeld, Germany","institution_ids":["https://openalex.org/I20121455"]},{"raw_affiliation_string":"International Research Training Group 1906, Bielefeld University, Bielefeld, Germany","institution_ids":["https://openalex.org/I20121455","https://openalex.org/I203082224"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5060291070"],"corresponding_institution_ids":["https://openalex.org/I20121455","https://openalex.org/I203082224"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":21.1871,"has_fulltext":false,"cited_by_count":29,"citation_normalized_percentile":{"value":0.99457154,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":null,"issue":null,"first_page":"217","last_page":"230"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9835000038146973,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9835000038146973,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11478","display_name":"Caching and Content Delivery","score":0.9437000155448914,"subfield":{"id":"https://openalex.org/subfields/1705","display_name":"Computer Networks and Communications"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12029","display_name":"DNA and Biological Computing","score":0.9345999956130981,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/bloom-filter","display_name":"Bloom filter","score":0.8848953247070312},{"id":"https://openalex.org/keywords/trie","display_name":"Trie","score":0.776059627532959},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.677430272102356},{"id":"https://openalex.org/keywords/data-structure","display_name":"Data structure","score":0.5953416228294373},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.5863716006278992},{"id":"https://openalex.org/keywords/traverse","display_name":"Traverse","score":0.5862887501716614},{"id":"https://openalex.org/keywords/colored","display_name":"Colored","score":0.5456399321556091},{"id":"https://openalex.org/keywords/de-bruijn-graph","display_name":"De Bruijn graph","score":0.4679865837097168},{"id":"https://openalex.org/keywords/graph","display_name":"Graph","score":0.4248502850532532},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.38067665696144104},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.27900320291519165},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.24845048785209656},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.13276568055152893},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.12388262152671814}],"concepts":[{"id":"https://openalex.org/C147224247","wikidata":"https://www.wikidata.org/wiki/Q885373","display_name":"Bloom filter","level":2,"score":0.8848953247070312},{"id":"https://openalex.org/C190290938","wikidata":"https://www.wikidata.org/wiki/Q387015","display_name":"Trie","level":3,"score":0.776059627532959},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.677430272102356},{"id":"https://openalex.org/C162319229","wikidata":"https://www.wikidata.org/wiki/Q175263","display_name":"Data structure","level":2,"score":0.5953416228294373},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.5863716006278992},{"id":"https://openalex.org/C176809094","wikidata":"https://www.wikidata.org/wiki/Q15401496","display_name":"Traverse","level":2,"score":0.5862887501716614},{"id":"https://openalex.org/C2778307483","wikidata":"https://www.wikidata.org/wiki/Q5149038","display_name":"Colored","level":2,"score":0.5456399321556091},{"id":"https://openalex.org/C20218877","wikidata":"https://www.wikidata.org/wiki/Q3066095","display_name":"De Bruijn graph","level":3,"score":0.4679865837097168},{"id":"https://openalex.org/C132525143","wikidata":"https://www.wikidata.org/wiki/Q141488","display_name":"Graph","level":2,"score":0.4248502850532532},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.38067665696144104},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.27900320291519165},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.24845048785209656},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.13276568055152893},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.12388262152671814},{"id":"https://openalex.org/C159985019","wikidata":"https://www.wikidata.org/wiki/Q181790","display_name":"Composite material","level":1,"score":0.0},{"id":"https://openalex.org/C13280743","wikidata":"https://www.wikidata.org/wiki/Q131089","display_name":"Geodesy","level":1,"score":0.0},{"id":"https://openalex.org/C205649164","wikidata":"https://www.wikidata.org/wiki/Q1071","display_name":"Geography","level":0,"score":0.0},{"id":"https://openalex.org/C192562407","wikidata":"https://www.wikidata.org/wiki/Q228736","display_name":"Materials science","level":0,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1007/978-3-662-48221-6_16","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-662-48221-6_16","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.723.231","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.723.231","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://www.techfak.uni-bielefeld.de/%7Estoye/dropbox/wabi2015final.pdf","raw_type":"text"},{"id":"pmh:oai:pub.librecat.org:2757497","is_oa":false,"landing_page_url":"https://pub.uni-bielefeld.de/record/2757497","pdf_url":null,"source":{"id":"https://openalex.org/S4306401671","display_name":"PUB \u2013 Publications at Bielefeld University (Bielefeld University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I20121455","host_organization_name":"Bielefeld University","host_organization_lineage":["https://openalex.org/I20121455"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Holley G, Wittler R, Stoye J. Bloom Filter Trie - a data structure for pan-genome storage. In: <em>Proceedings of WABI 2015</em>. LNBI. Vol 9289. 2015: 217-230.","raw_type":"info:eu-repo/semantics/conferenceObject"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":24,"referenced_works":["https://openalex.org/W1850890413","https://openalex.org/W1954100204","https://openalex.org/W2010361633","https://openalex.org/W2013697960","https://openalex.org/W2037219729","https://openalex.org/W2076747312","https://openalex.org/W2093080729","https://openalex.org/W2096128575","https://openalex.org/W2103441770","https://openalex.org/W2104677379","https://openalex.org/W2114500329","https://openalex.org/W2123845384","https://openalex.org/W2125266506","https://openalex.org/W2127901812","https://openalex.org/W2131106408","https://openalex.org/W2137351413","https://openalex.org/W2156104322","https://openalex.org/W2161488606","https://openalex.org/W2163830511","https://openalex.org/W2168133698","https://openalex.org/W2190316264","https://openalex.org/W2245756385","https://openalex.org/W2247945216","https://openalex.org/W2337480916"],"related_works":["https://openalex.org/W2075698953","https://openalex.org/W1989507269","https://openalex.org/W2212047860","https://openalex.org/W2277163753","https://openalex.org/W2998324560","https://openalex.org/W2773435329","https://openalex.org/W2323304991","https://openalex.org/W2367011915","https://openalex.org/W2105656684","https://openalex.org/W2278452282"],"abstract_inverted_index":null,"counts_by_year":[{"year":2023,"cited_by_count":1},{"year":2021,"cited_by_count":2},{"year":2020,"cited_by_count":2},{"year":2019,"cited_by_count":6},{"year":2018,"cited_by_count":5},{"year":2017,"cited_by_count":3},{"year":2016,"cited_by_count":9},{"year":2015,"cited_by_count":1}],"updated_date":"2026-08-04T08:18:43.703281","created_date":"2025-10-10T00:00:00"}