{"id":"https://openalex.org/W2101033312","doi":"https://doi.org/10.1007/978-3-662-48221-6_15","title":"Circular Sequence Comparison with q-grams","display_name":"Circular Sequence Comparison with q-grams","publication_year":2015,"publication_date":"2015-01-01","ids":{"openalex":"https://openalex.org/W2101033312","doi":"https://doi.org/10.1007/978-3-662-48221-6_15","mag":"2101033312"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-662-48221-6_15","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-662-48221-6_15","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://inria.hal.science/hal-01246271","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5006984021","display_name":"Roberto Grossi","orcid":"https://orcid.org/0000-0002-7985-4222"},"institutions":[{"id":"https://openalex.org/I108290504","display_name":"University of Pisa","ror":"https://ror.org/03ad39j10","country_code":"IT","type":"education","lineage":["https://openalex.org/I108290504"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Roberto Grossi","raw_affiliation_strings":["Department of Computer Science, University of Pisa and Erable Team, INRIA, Pisa, Italy","Dipartimento di Informatica [Pisa]","Equipe de recherche europ\u00e9enne en algorithmique et biologie formelle et exp\u00e9rimentale"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of Pisa and Erable Team, INRIA, Pisa, Italy","institution_ids":["https://openalex.org/I108290504"]},{"raw_affiliation_string":"Dipartimento di Informatica [Pisa]","institution_ids":[]},{"raw_affiliation_string":"Equipe de recherche europ\u00e9enne en algorithmique et biologie formelle et exp\u00e9rimentale","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5058155947","display_name":"Costas S. Iliopoulos","orcid":"https://orcid.org/0000-0003-3909-0077"},"institutions":[{"id":"https://openalex.org/I183935753","display_name":"King's College London","ror":"https://ror.org/0220mzb33","country_code":"GB","type":"education","lineage":["https://openalex.org/I124357947","https://openalex.org/I183935753"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Costas S. Iliopoulos","raw_affiliation_strings":["Department of Informatics, King\u2019s College London, London, UK","Department of Informatics [King's College London]"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Informatics, King\u2019s College London, London, UK","institution_ids":["https://openalex.org/I183935753"]},{"raw_affiliation_string":"Department of Informatics [King's College London]","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5049507611","display_name":"Robert Merca\u015f","orcid":"https://orcid.org/0000-0001-6034-433X"},"institutions":[{"id":"https://openalex.org/I183935753","display_name":"King's College London","ror":"https://ror.org/0220mzb33","country_code":"GB","type":"education","lineage":["https://openalex.org/I124357947","https://openalex.org/I183935753"]},{"id":"https://openalex.org/I32021983","display_name":"Christian-Albrechts-Universit\u00e4t zu Kiel","ror":"https://ror.org/04v76ef78","country_code":"DE","type":"education","lineage":["https://openalex.org/I32021983"]}],"countries":["DE","GB"],"is_corresponding":false,"raw_author_name":"Robert Merca\u015f","raw_affiliation_strings":["Department of Computer Science, Kiel University, Kiel, Germany","Department of Informatics, King\u2019s College London, London, UK","Department of Computer Science [Kiel]","Department of Informatics [King's College London]"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Kiel University, Kiel, Germany","institution_ids":["https://openalex.org/I32021983"]},{"raw_affiliation_string":"Department of Informatics, King\u2019s College London, London, UK","institution_ids":["https://openalex.org/I183935753"]},{"raw_affiliation_string":"Department of Computer Science [Kiel]","institution_ids":[]},{"raw_affiliation_string":"Department of Informatics [King's College London]","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5081785647","display_name":"Nadia Pisanti","orcid":"https://orcid.org/0000-0003-3915-7665"},"institutions":[{"id":"https://openalex.org/I108290504","display_name":"University of Pisa","ror":"https://ror.org/03ad39j10","country_code":"IT","type":"education","lineage":["https://openalex.org/I108290504"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Nadia Pisanti","raw_affiliation_strings":["Department of Computer Science, University of Pisa and Erable Team, INRIA, Pisa, Italy","Dipartimento di Informatica [Pisa]","Equipe de recherche europ\u00e9enne en algorithmique et biologie formelle et exp\u00e9rimentale"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of Pisa and Erable Team, INRIA, Pisa, Italy","institution_ids":["https://openalex.org/I108290504"]},{"raw_affiliation_string":"Dipartimento di Informatica [Pisa]","institution_ids":[]},{"raw_affiliation_string":"Equipe de recherche europ\u00e9enne en algorithmique et biologie formelle et exp\u00e9rimentale","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5051275317","display_name":"Solon P. Pissis","orcid":"https://orcid.org/0000-0002-1445-1932"},"institutions":[{"id":"https://openalex.org/I183935753","display_name":"King's College London","ror":"https://ror.org/0220mzb33","country_code":"GB","type":"education","lineage":["https://openalex.org/I124357947","https://openalex.org/I183935753"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"Solon P. Pissis","raw_affiliation_strings":["Department of Informatics, King\u2019s College London, London, UK","Department of Informatics [King's College London]"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Informatics, King\u2019s College London, London, UK","institution_ids":["https://openalex.org/I183935753"]},{"raw_affiliation_string":"Department of Informatics [King's College London]","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5065372413","display_name":"Ahmad Retha","orcid":"https://orcid.org/0000-0002-4467-7270"},"institutions":[{"id":"https://openalex.org/I183935753","display_name":"King's College London","ror":"https://ror.org/0220mzb33","country_code":"GB","type":"education","lineage":["https://openalex.org/I124357947","https://openalex.org/I183935753"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Ahmad Retha","raw_affiliation_strings":["Department of Informatics, King\u2019s College London, London, UK","Department of Informatics [King's College London]"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Informatics, King\u2019s College London, London, UK","institution_ids":["https://openalex.org/I183935753"]},{"raw_affiliation_string":"Department of Informatics [King's College London]","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5071306539","display_name":"Fatima Vayani","orcid":"https://orcid.org/0000-0003-0853-611X"},"institutions":[{"id":"https://openalex.org/I183935753","display_name":"King's College London","ror":"https://ror.org/0220mzb33","country_code":"GB","type":"education","lineage":["https://openalex.org/I124357947","https://openalex.org/I183935753"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Fatima Vayani","raw_affiliation_strings":["Department of Informatics, King\u2019s College London, London, UK","Department of Informatics [King's College London]"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Informatics, King\u2019s College London, London, UK","institution_ids":["https://openalex.org/I183935753"]},{"raw_affiliation_string":"Department of Informatics [King's College London]","institution_ids":[]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5051275317"],"corresponding_institution_ids":["https://openalex.org/I183935753"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":1.0287,"has_fulltext":false,"cited_by_count":5,"citation_normalized_percentile":{"value":0.77904065,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":97},"biblio":{"volume":null,"issue":null,"first_page":"203","last_page":"216"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9988999962806702,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9873999953269958,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.7798075675964355},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.683682918548584},{"id":"https://openalex.org/keywords/measure","display_name":"Measure (data warehouse)","score":0.60014808177948},{"id":"https://openalex.org/keywords/similarity","display_name":"Similarity (geometry)","score":0.5901886224746704},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.588160514831543},{"id":"https://openalex.org/keywords/quadratic-equation","display_name":"Quadratic equation","score":0.4909391701221466},{"id":"https://openalex.org/keywords/edit-distance","display_name":"Edit distance","score":0.44906702637672424},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.26550745964050293},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.25962013006210327},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.24996894598007202},{"id":"https://openalex.org/keywords/image","display_name":"Image (mathematics)","score":0.20143452286720276},{"id":"https://openalex.org/keywords/geometry","display_name":"Geometry","score":0.1518246829509735}],"concepts":[{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.7798075675964355},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.683682918548584},{"id":"https://openalex.org/C2780009758","wikidata":"https://www.wikidata.org/wiki/Q6804172","display_name":"Measure (data warehouse)","level":2,"score":0.60014808177948},{"id":"https://openalex.org/C103278499","wikidata":"https://www.wikidata.org/wiki/Q254465","display_name":"Similarity (geometry)","level":3,"score":0.5901886224746704},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.588160514831543},{"id":"https://openalex.org/C129844170","wikidata":"https://www.wikidata.org/wiki/Q41299","display_name":"Quadratic equation","level":2,"score":0.4909391701221466},{"id":"https://openalex.org/C44359876","wikidata":"https://www.wikidata.org/wiki/Q5338467","display_name":"Edit distance","level":2,"score":0.44906702637672424},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.26550745964050293},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.25962013006210327},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.24996894598007202},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.20143452286720276},{"id":"https://openalex.org/C2524010","wikidata":"https://www.wikidata.org/wiki/Q8087","display_name":"Geometry","level":1,"score":0.1518246829509735},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.0},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.1007/978-3-662-48221-6_15","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-662-48221-6_15","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},{"id":"pmh:oai:HAL:hal-01246271v2","is_oa":true,"landing_page_url":"https://inria.hal.science/hal-01246271","pdf_url":null,"source":{"id":"https://openalex.org/S4306402512","display_name":"HAL (Le Centre pour la Communication Scientifique Directe)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1294671590","host_organization_name":"Centre National de la Recherche Scientifique","host_organization_lineage":["https://openalex.org/I1294671590"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"15th International Workshop on Algorithms in Bioinformatics (WABI 2015), Sep 2015, Atlanta, United States. pp.203 - 216, &#x27E8;10.1007/978-3-662-48221-6_15&#x27E9;","raw_type":"info:eu-repo/semantics/conferenceObject"},{"id":"pmh:oai:arpi.unipi.it:11568/752098","is_oa":true,"landing_page_url":"http://link.springer.com/chapter/10.1007/978-3-662-48221-6_15","pdf_url":null,"source":{"id":"https://openalex.org/S4377196265","display_name":"CINECA IRIS Institutial research information system (University of Pisa)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I108290504","host_organization_name":"University of Pisa","host_organization_lineage":["https://openalex.org/I108290504"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"info:eu-repo/semantics/conferenceObject"},{"id":"pmh:oai:kclpure.kcl.ac.uk:publications/f6d77421-41e1-4c24-affc-c933be5aa2b1","is_oa":false,"landing_page_url":"https://kclpure.kcl.ac.uk/portal/en/publications/f6d77421-41e1-4c24-affc-c933be5aa2b1","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Grossi , R , Iliopoulos , C S , Merca\u015f , R , Pisanti , N , Pissis , S , Retha , A &amp; Vayani , F 2015 , Circular Sequence Comparison with q-grams . in M Pop &amp; H Touzet (eds) , Algorithms in Bioinformatics : 15th International Workshop, WABI 2015, Atlanta, GA, USA, September 10-12, 2015, Proceedings . Lecture Notes in Computer Science , vol. 9289 , pp. 203-216 . https://doi.org/10.1007/978-3-662-48221-6_15","raw_type":"contributionToPeriodical"}],"best_oa_location":{"id":"pmh:oai:HAL:hal-01246271v2","is_oa":true,"landing_page_url":"https://inria.hal.science/hal-01246271","pdf_url":null,"source":{"id":"https://openalex.org/S4306402512","display_name":"HAL (Le Centre pour la Communication Scientifique Directe)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1294671590","host_organization_name":"Centre National de la Recherche Scientifique","host_organization_lineage":["https://openalex.org/I1294671590"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"15th International Workshop on Algorithms in Bioinformatics (WABI 2015), Sep 2015, Atlanta, United States. pp.203 - 216, &#x27E8;10.1007/978-3-662-48221-6_15&#x27E9;","raw_type":"info:eu-repo/semantics/conferenceObject"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":37,"referenced_works":["https://openalex.org/W169244374","https://openalex.org/W1504417041","https://openalex.org/W1573766151","https://openalex.org/W1579210880","https://openalex.org/W1583827615","https://openalex.org/W1964236485","https://openalex.org/W1975897337","https://openalex.org/W1996423252","https://openalex.org/W1996537444","https://openalex.org/W1998048394","https://openalex.org/W2020739850","https://openalex.org/W2021202955","https://openalex.org/W2027400096","https://openalex.org/W2028445324","https://openalex.org/W2032252310","https://openalex.org/W2043481183","https://openalex.org/W2066846592","https://openalex.org/W2068448872","https://openalex.org/W2073531516","https://openalex.org/W2074231493","https://openalex.org/W2083674249","https://openalex.org/W2087412218","https://openalex.org/W2095824228","https://openalex.org/W2100258314","https://openalex.org/W2103320153","https://openalex.org/W2112777598","https://openalex.org/W2141923006","https://openalex.org/W2142056256","https://openalex.org/W2150080785","https://openalex.org/W2154310778","https://openalex.org/W2157552136","https://openalex.org/W2158874082","https://openalex.org/W2537423815","https://openalex.org/W3098893300","https://openalex.org/W4246007704","https://openalex.org/W4247964656","https://openalex.org/W4254652536"],"related_works":["https://openalex.org/W3044917232","https://openalex.org/W1498160656","https://openalex.org/W2055693471","https://openalex.org/W2119149496","https://openalex.org/W2139858675","https://openalex.org/W2952580779","https://openalex.org/W1537327044","https://openalex.org/W4295101776","https://openalex.org/W123129858","https://openalex.org/W4241588278"],"abstract_inverted_index":null,"counts_by_year":[{"year":2017,"cited_by_count":1},{"year":2016,"cited_by_count":3},{"year":2015,"cited_by_count":1}],"updated_date":"2026-08-04T08:18:43.703281","created_date":"2025-10-10T00:00:00"}
