{"id":"https://openalex.org/W1412518142","doi":"https://doi.org/10.1007/978-3-662-44485-6_10","title":"Formal Analysis of Gene Networks Using Network Motifs","display_name":"Formal Analysis of Gene Networks Using Network Motifs","publication_year":2014,"publication_date":"2014-01-01","ids":{"openalex":"https://openalex.org/W1412518142","doi":"https://doi.org/10.1007/978-3-662-44485-6_10","mag":"1412518142"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-662-44485-6_10","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-662-44485-6_10","pdf_url":null,"source":{"id":"https://openalex.org/S2764900261","display_name":"Communications in computer and information science","issn_l":"1865-0929","issn":["1865-0929","1865-0937"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Communications in Computer and Information Science","raw_type":"book-chapter"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5086778134","display_name":"Sohei Ito","orcid":"https://orcid.org/0000-0002-7029-664X"},"institutions":[{"id":"https://openalex.org/I4210146532","display_name":"National Fisheries University","ror":"https://ror.org/04kkb3773","country_code":"JP","type":"education","lineage":["https://openalex.org/I4210146532"]}],"countries":["JP"],"is_corresponding":true,"raw_author_name":"Sohei Ito","raw_affiliation_strings":["National Fisheries University, Shimonoseki, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"National Fisheries University, Shimonoseki, Japan","institution_ids":["https://openalex.org/I4210146532"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5080302093","display_name":"Takuma Ichinose","orcid":null},"institutions":[{"id":"https://openalex.org/I114531698","display_name":"Tokyo Institute of Technology","ror":"https://ror.org/0112mx960","country_code":"JP","type":"education","lineage":["https://openalex.org/I114531698"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Takuma Ichinose","raw_affiliation_strings":["Tokyo Institute of Technology, Tokyo, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Tokyo Institute of Technology, Tokyo, Japan","institution_ids":["https://openalex.org/I114531698"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5016472438","display_name":"Masaya Shimakawa","orcid":null},"institutions":[{"id":"https://openalex.org/I114531698","display_name":"Tokyo Institute of Technology","ror":"https://ror.org/0112mx960","country_code":"JP","type":"education","lineage":["https://openalex.org/I114531698"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Masaya Shimakawa","raw_affiliation_strings":["Tokyo Institute of Technology, Tokyo, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Tokyo Institute of Technology, Tokyo, Japan","institution_ids":["https://openalex.org/I114531698"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5009330111","display_name":"Naoko Izumi","orcid":null},"institutions":[{"id":"https://openalex.org/I36475266","display_name":"Jumonji University","ror":"https://ror.org/03068df82","country_code":"JP","type":"education","lineage":["https://openalex.org/I36475266"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Naoko Izumi","raw_affiliation_strings":["Jumonji University, Niiza, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Jumonji University, Niiza, Japan","institution_ids":["https://openalex.org/I36475266"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5088859890","display_name":"Shigeki Hagihara","orcid":"https://orcid.org/0000-0002-9094-6398"},"institutions":[{"id":"https://openalex.org/I114531698","display_name":"Tokyo Institute of Technology","ror":"https://ror.org/0112mx960","country_code":"JP","type":"education","lineage":["https://openalex.org/I114531698"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Shigeki Hagihara","raw_affiliation_strings":["Tokyo Institute of Technology, Tokyo, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Tokyo Institute of Technology, Tokyo, Japan","institution_ids":["https://openalex.org/I114531698"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5058739699","display_name":"Naoki Yonezaki","orcid":null},"institutions":[{"id":"https://openalex.org/I114531698","display_name":"Tokyo Institute of Technology","ror":"https://ror.org/0112mx960","country_code":"JP","type":"education","lineage":["https://openalex.org/I114531698"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Naoki Yonezaki","raw_affiliation_strings":["Tokyo Institute of Technology, Tokyo, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Tokyo Institute of Technology, Tokyo, Japan","institution_ids":["https://openalex.org/I114531698"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5086778134"],"corresponding_institution_ids":["https://openalex.org/I4210146532"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":4,"citation_normalized_percentile":{"value":0.0492533,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":94,"max":96},"biblio":{"volume":null,"issue":null,"first_page":"131","last_page":"146"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10142","display_name":"Formal Methods in Verification","score":0.9876000285148621,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11178","display_name":"Receptor Mechanisms and Signaling","score":0.9860000014305115,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/satisfiability","display_name":"Satisfiability","score":0.8359217643737793},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6788030862808228},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.6084325313568115},{"id":"https://openalex.org/keywords/model-checking","display_name":"Model checking","score":0.5976333618164062},{"id":"https://openalex.org/keywords/gene-regulatory-network","display_name":"Gene regulatory network","score":0.4805453419685364},{"id":"https://openalex.org/keywords/linear-temporal-logic","display_name":"Linear temporal logic","score":0.4549519419670105},{"id":"https://openalex.org/keywords/computational-complexity-theory","display_name":"Computational complexity theory","score":0.44205567240715027},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.3643684387207031},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.1580183207988739},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.10108283162117004}],"concepts":[{"id":"https://openalex.org/C168773769","wikidata":"https://www.wikidata.org/wiki/Q1350299","display_name":"Satisfiability","level":2,"score":0.8359217643737793},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6788030862808228},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.6084325313568115},{"id":"https://openalex.org/C110251889","wikidata":"https://www.wikidata.org/wiki/Q1569697","display_name":"Model checking","level":2,"score":0.5976333618164062},{"id":"https://openalex.org/C67339327","wikidata":"https://www.wikidata.org/wiki/Q1502576","display_name":"Gene regulatory network","level":4,"score":0.4805453419685364},{"id":"https://openalex.org/C4777664","wikidata":"https://www.wikidata.org/wiki/Q1536492","display_name":"Linear temporal logic","level":2,"score":0.4549519419670105},{"id":"https://openalex.org/C179799912","wikidata":"https://www.wikidata.org/wiki/Q205084","display_name":"Computational complexity theory","level":2,"score":0.44205567240715027},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.3643684387207031},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.1580183207988739},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.10108283162117004},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/978-3-662-44485-6_10","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-662-44485-6_10","pdf_url":null,"source":{"id":"https://openalex.org/S2764900261","display_name":"Communications in computer and information science","issn_l":"1865-0929","issn":["1865-0929","1865-0937"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Communications in Computer and Information Science","raw_type":"book-chapter"}],"best_oa_location":null,"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/17","score":0.4399999976158142,"display_name":"Partnerships for the goals"}],"awards":[{"id":"https://openalex.org/G5400270120","display_name":"Extracting information for correction of flaws from embedded system specification of practical scale by formal method","funder_award_id":"24500032","funder_id":"https://openalex.org/F4320334764","funder_display_name":"Japan Society for the Promotion of Science"}],"funders":[{"id":"https://openalex.org/F4320334764","display_name":"Japan Society for the Promotion of Science","ror":"https://ror.org/00hhkn466"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":14,"referenced_works":["https://openalex.org/W1482244486","https://openalex.org/W1589421353","https://openalex.org/W1590266960","https://openalex.org/W1990609140","https://openalex.org/W2003227046","https://openalex.org/W2013805271","https://openalex.org/W2016206563","https://openalex.org/W2052835655","https://openalex.org/W2061425021","https://openalex.org/W2065782501","https://openalex.org/W2091117137","https://openalex.org/W2403247061","https://openalex.org/W4234096182","https://openalex.org/W4237523908"],"related_works":["https://openalex.org/W2350953867","https://openalex.org/W4312622265","https://openalex.org/W70902631","https://openalex.org/W2085847302","https://openalex.org/W2093227835","https://openalex.org/W1592102986","https://openalex.org/W4281812495","https://openalex.org/W2127730763","https://openalex.org/W4313193894","https://openalex.org/W2031157814"],"abstract_inverted_index":null,"counts_by_year":[{"year":2019,"cited_by_count":2},{"year":2018,"cited_by_count":2}],"updated_date":"2026-08-04T08:18:43.703281","created_date":"2025-10-10T00:00:00"}
