{"id":"https://openalex.org/W107886322","doi":"https://doi.org/10.1007/978-3-662-44199-2_23","title":"javaPlex: A Research Software Package for Persistent (Co)Homology","display_name":"javaPlex: A Research Software Package for Persistent (Co)Homology","publication_year":2014,"publication_date":"2014-01-01","ids":{"openalex":"https://openalex.org/W107886322","doi":"https://doi.org/10.1007/978-3-662-44199-2_23","mag":"107886322"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-662-44199-2_23","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-662-44199-2_23","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5018524538","display_name":"Henry Adams","orcid":"https://orcid.org/0000-0003-0914-6316"},"institutions":[{"id":"https://openalex.org/I4210107842","display_name":"Institute of Mathematics and its Applications","ror":"https://ror.org/01rxg5p40","country_code":"GB","type":"education","lineage":["https://openalex.org/I4210107842"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"Henry Adams","raw_affiliation_strings":["Institute of Mathematics and its Applications, USA","Institute of Mathematics and its Applications"],"affiliations":[{"raw_affiliation_string":"Institute of Mathematics and its Applications, USA","institution_ids":[]},{"raw_affiliation_string":"Institute of Mathematics and its Applications","institution_ids":["https://openalex.org/I4210107842"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5026005397","display_name":"Andrew Tausz","orcid":null},"institutions":[{"id":"https://openalex.org/I97018004","display_name":"Stanford University","ror":"https://ror.org/00f54p054","country_code":"US","type":"education","lineage":["https://openalex.org/I97018004"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Andrew Tausz","raw_affiliation_strings":["Stanford University, USA","Stanford University"],"affiliations":[{"raw_affiliation_string":"Stanford University, USA","institution_ids":["https://openalex.org/I97018004"]},{"raw_affiliation_string":"Stanford University","institution_ids":["https://openalex.org/I97018004"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5049695343","display_name":"Mikael Vejdemo\u2010Johansson","orcid":"https://orcid.org/0000-0001-6322-7542"},"institutions":[{"id":"https://openalex.org/I86987016","display_name":"KTH Royal Institute of Technology","ror":"https://ror.org/026vcq606","country_code":"SE","type":"education","lineage":["https://openalex.org/I86987016"]},{"id":"https://openalex.org/I3006985408","display_name":"Jo\u017eef Stefan Institute","ror":"https://ror.org/05060sz93","country_code":"SI","type":"facility","lineage":["https://openalex.org/I3006985408"]}],"countries":["SE","SI"],"is_corresponding":false,"raw_author_name":"Mikael Vejdemo-Johansson","raw_affiliation_strings":["Institut Jozef Stefan, Slovenia","KTH Royal Institute of Technology, Sweden","KTH Royal Institute of Technology","Institut Jozef Stefan"],"affiliations":[{"raw_affiliation_string":"Institut Jozef Stefan, Slovenia","institution_ids":["https://openalex.org/I3006985408"]},{"raw_affiliation_string":"KTH Royal Institute of Technology, Sweden","institution_ids":["https://openalex.org/I86987016"]},{"raw_affiliation_string":"KTH Royal Institute of Technology","institution_ids":["https://openalex.org/I86987016"]},{"raw_affiliation_string":"Institut Jozef Stefan","institution_ids":["https://openalex.org/I3006985408"]}]}],"institutions":[],"countries_distinct_count":4,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5018524538"],"corresponding_institution_ids":["https://openalex.org/I4210107842"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":28.7343,"has_fulltext":false,"cited_by_count":238,"citation_normalized_percentile":{"value":0.99839615,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":96,"max":100},"biblio":{"volume":null,"issue":null,"first_page":"129","last_page":"136"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12536","display_name":"Topological and Geometric Data Analysis","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T12536","display_name":"Topological and Geometric Data Analysis","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10896","display_name":"Homotopy and Cohomology in Algebraic Topology","score":0.9743000268936157,"subfield":{"id":"https://openalex.org/subfields/2610","display_name":"Mathematical Physics"},"field":{"id":"https://openalex.org/fields/26","display_name":"Mathematics"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12107","display_name":"Leprosy Research and Treatment","score":0.9083999991416931,"subfield":{"id":"https://openalex.org/subfields/2725","display_name":"Infectious Diseases"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computational-topology","display_name":"Computational topology","score":0.6946604251861572},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6897798776626587},{"id":"https://openalex.org/keywords/persistent-homology","display_name":"Persistent homology","score":0.615664541721344},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.5501582622528076},{"id":"https://openalex.org/keywords/computation","display_name":"Computation","score":0.5318009257316589},{"id":"https://openalex.org/keywords/homology","display_name":"Homology (biology)","score":0.5051584839820862},{"id":"https://openalex.org/keywords/software-package","display_name":"Software package","score":0.49724629521369934},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.47778090834617615},{"id":"https://openalex.org/keywords/topology","display_name":"Topology (electrical circuits)","score":0.45262712240219116},{"id":"https://openalex.org/keywords/witness","display_name":"Witness","score":0.4169473350048065},{"id":"https://openalex.org/keywords/computational-science","display_name":"Computational science","score":0.3305150866508484},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.3020743131637573},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.18780207633972168},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.16096973419189453},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.10251608490943909}],"concepts":[{"id":"https://openalex.org/C181576044","wikidata":"https://www.wikidata.org/wiki/Q4129926","display_name":"Computational topology","level":3,"score":0.6946604251861572},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6897798776626587},{"id":"https://openalex.org/C2874115","wikidata":"https://www.wikidata.org/wiki/Q17099562","display_name":"Persistent homology","level":2,"score":0.615664541721344},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.5501582622528076},{"id":"https://openalex.org/C45374587","wikidata":"https://www.wikidata.org/wiki/Q12525525","display_name":"Computation","level":2,"score":0.5318009257316589},{"id":"https://openalex.org/C165525559","wikidata":"https://www.wikidata.org/wiki/Q224180","display_name":"Homology (biology)","level":3,"score":0.5051584839820862},{"id":"https://openalex.org/C3020440742","wikidata":"https://www.wikidata.org/wiki/Q1176855","display_name":"Software package","level":3,"score":0.49724629521369934},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.47778090834617615},{"id":"https://openalex.org/C184720557","wikidata":"https://www.wikidata.org/wiki/Q7825049","display_name":"Topology (electrical circuits)","level":2,"score":0.45262712240219116},{"id":"https://openalex.org/C2776900844","wikidata":"https://www.wikidata.org/wiki/Q8028383","display_name":"Witness","level":2,"score":0.4169473350048065},{"id":"https://openalex.org/C459310","wikidata":"https://www.wikidata.org/wiki/Q117801","display_name":"Computational science","level":1,"score":0.3305150866508484},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.3020743131637573},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.18780207633972168},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.16096973419189453},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.10251608490943909},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C110521144","wikidata":"https://www.wikidata.org/wiki/Q193460","display_name":"Scalar field","level":2,"score":0.0},{"id":"https://openalex.org/C37914503","wikidata":"https://www.wikidata.org/wiki/Q156495","display_name":"Mathematical physics","level":1,"score":0.0},{"id":"https://openalex.org/C114614502","wikidata":"https://www.wikidata.org/wiki/Q76592","display_name":"Combinatorics","level":1,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/978-3-662-44199-2_23","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-662-44199-2_23","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":7,"referenced_works":["https://openalex.org/W1486210143","https://openalex.org/W1979273469","https://openalex.org/W1991566301","https://openalex.org/W2102692026","https://openalex.org/W2144044408","https://openalex.org/W3013843370","https://openalex.org/W3037478629"],"related_works":["https://openalex.org/W2942061931","https://openalex.org/W3104241874","https://openalex.org/W3137290046","https://openalex.org/W4213033583","https://openalex.org/W2958601279","https://openalex.org/W2102692026","https://openalex.org/W4360887047","https://openalex.org/W3135814603","https://openalex.org/W3212961654","https://openalex.org/W3198723315"],"abstract_inverted_index":null,"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":6},{"year":2024,"cited_by_count":12},{"year":2023,"cited_by_count":13},{"year":2022,"cited_by_count":18},{"year":2021,"cited_by_count":32},{"year":2020,"cited_by_count":29},{"year":2019,"cited_by_count":23},{"year":2018,"cited_by_count":23},{"year":2017,"cited_by_count":19},{"year":2016,"cited_by_count":23},{"year":2015,"cited_by_count":19},{"year":2014,"cited_by_count":11},{"year":2013,"cited_by_count":5},{"year":2012,"cited_by_count":3}],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2025-10-10T00:00:00"}