{"id":"https://openalex.org/W1839470988","doi":"https://doi.org/10.1007/978-3-642-54420-0_31","title":"Transparent Incremental Updates for Genomics Data Analysis Pipelines","display_name":"Transparent Incremental Updates for Genomics Data Analysis Pipelines","publication_year":2014,"publication_date":"2014-01-01","ids":{"openalex":"https://openalex.org/W1839470988","doi":"https://doi.org/10.1007/978-3-642-54420-0_31","mag":"1839470988"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-642-54420-0_31","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-642-54420-0_31","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://hdl.handle.net/10037/6902","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5031943309","display_name":"Edvard Pedersen","orcid":null},"institutions":[{"id":"https://openalex.org/I78037679","display_name":"UiT The Arctic University of Norway","ror":"https://ror.org/00wge5k78","country_code":"NO","type":"education","lineage":["https://openalex.org/I78037679"]}],"countries":["NO"],"is_corresponding":true,"raw_author_name":"Edvard Pedersen","raw_affiliation_strings":["Centre for Bioinformatics, University of Troms\u00f8, Norway","Department of Computer Science, University of Troms\u00f8, Norway"],"affiliations":[{"raw_affiliation_string":"Centre for Bioinformatics, University of Troms\u00f8, Norway","institution_ids":["https://openalex.org/I78037679"]},{"raw_affiliation_string":"Department of Computer Science, University of Troms\u00f8, Norway","institution_ids":["https://openalex.org/I78037679"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5022736457","display_name":"Nils Peder Willassen","orcid":"https://orcid.org/0000-0002-4397-8020"},"institutions":[{"id":"https://openalex.org/I78037679","display_name":"UiT The Arctic University of Norway","ror":"https://ror.org/00wge5k78","country_code":"NO","type":"education","lineage":["https://openalex.org/I78037679"]}],"countries":["NO"],"is_corresponding":false,"raw_author_name":"Nils Peder Willassen","raw_affiliation_strings":["Centre for Bioinformatics, University of Troms\u00f8, Norway","Department of Chemistry, University of Troms\u00f8, Norway"],"affiliations":[{"raw_affiliation_string":"Centre for Bioinformatics, University of Troms\u00f8, Norway","institution_ids":["https://openalex.org/I78037679"]},{"raw_affiliation_string":"Department of Chemistry, University of Troms\u00f8, Norway","institution_ids":["https://openalex.org/I78037679"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5013607592","display_name":"Lars Ailo Bongo","orcid":"https://orcid.org/0000-0002-7544-2482"},"institutions":[{"id":"https://openalex.org/I78037679","display_name":"UiT The Arctic University of Norway","ror":"https://ror.org/00wge5k78","country_code":"NO","type":"education","lineage":["https://openalex.org/I78037679"]}],"countries":["NO"],"is_corresponding":false,"raw_author_name":"Lars Ailo Bongo","raw_affiliation_strings":["Centre for Bioinformatics, University of Troms\u00f8, Norway","Department of Computer Science, University of Troms\u00f8, Norway"],"affiliations":[{"raw_affiliation_string":"Centre for Bioinformatics, University of Troms\u00f8, Norway","institution_ids":["https://openalex.org/I78037679"]},{"raw_affiliation_string":"Department of Computer Science, University of Troms\u00f8, Norway","institution_ids":["https://openalex.org/I78037679"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5031943309"],"corresponding_institution_ids":["https://openalex.org/I78037679"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":5.7881,"has_fulltext":false,"cited_by_count":5,"citation_normalized_percentile":{"value":0.96382314,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":96},"biblio":{"volume":null,"issue":null,"first_page":"311","last_page":"320"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9975000023841858,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},"topics":[{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9975000023841858,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T10715","display_name":"Distributed and Parallel Computing Systems","score":0.9955000281333923,"subfield":{"id":"https://openalex.org/subfields/1705","display_name":"Computer Networks and Communications"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9901999831199646,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/compendium","display_name":"Compendium","score":0.974614679813385},{"id":"https://openalex.org/keywords/terabyte","display_name":"Terabyte","score":0.8521078824996948},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8021458387374878},{"id":"https://openalex.org/keywords/workflow","display_name":"Workflow","score":0.7893388271331787},{"id":"https://openalex.org/keywords/pipeline","display_name":"Pipeline (software)","score":0.7512633800506592},{"id":"https://openalex.org/keywords/genomics","display_name":"Genomics","score":0.5859230160713196},{"id":"https://openalex.org/keywords/big-data","display_name":"Big data","score":0.5373744964599609},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.49393945932388306},{"id":"https://openalex.org/keywords/pipeline-transport","display_name":"Pipeline transport","score":0.4745950400829315},{"id":"https://openalex.org/keywords/data-processing","display_name":"Data processing","score":0.4530404210090637},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.4334743618965149},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.3544178009033203},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.1544971466064453},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.08099111914634705}],"concepts":[{"id":"https://openalex.org/C2778473407","wikidata":"https://www.wikidata.org/wiki/Q1459574","display_name":"Compendium","level":2,"score":0.974614679813385},{"id":"https://openalex.org/C199683683","wikidata":"https://www.wikidata.org/wiki/Q8799","display_name":"Terabyte","level":2,"score":0.8521078824996948},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8021458387374878},{"id":"https://openalex.org/C177212765","wikidata":"https://www.wikidata.org/wiki/Q627335","display_name":"Workflow","level":2,"score":0.7893388271331787},{"id":"https://openalex.org/C43521106","wikidata":"https://www.wikidata.org/wiki/Q2165493","display_name":"Pipeline (software)","level":2,"score":0.7512633800506592},{"id":"https://openalex.org/C189206191","wikidata":"https://www.wikidata.org/wiki/Q222046","display_name":"Genomics","level":4,"score":0.5859230160713196},{"id":"https://openalex.org/C75684735","wikidata":"https://www.wikidata.org/wiki/Q858810","display_name":"Big data","level":2,"score":0.5373744964599609},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.49393945932388306},{"id":"https://openalex.org/C175309249","wikidata":"https://www.wikidata.org/wiki/Q725864","display_name":"Pipeline transport","level":2,"score":0.4745950400829315},{"id":"https://openalex.org/C138827492","wikidata":"https://www.wikidata.org/wiki/Q6661985","display_name":"Data processing","level":2,"score":0.4530404210090637},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.4334743618965149},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.3544178009033203},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.1544971466064453},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.08099111914634705},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C87717796","wikidata":"https://www.wikidata.org/wiki/Q146326","display_name":"Environmental engineering","level":1,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.0},{"id":"https://openalex.org/C166957645","wikidata":"https://www.wikidata.org/wiki/Q23498","display_name":"Archaeology","level":1,"score":0.0},{"id":"https://openalex.org/C95457728","wikidata":"https://www.wikidata.org/wiki/Q309","display_name":"History","level":0,"score":0.0}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.1007/978-3-642-54420-0_31","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-642-54420-0_31","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.972.8775","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.972.8775","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://munin.uit.no/bitstream/handle/10037/7563/article.pdf%3Bjsessionid%3DF417CDA62440B314442C7337132AEDB8?sequence%3D1","raw_type":"text"},{"id":"pmh:oai:munin.uit.no:10037/6902","is_oa":true,"landing_page_url":"https://hdl.handle.net/10037/6902","pdf_url":null,"source":{"id":"https://openalex.org/S4306401716","display_name":"Duo Research Archive (University of Oslo)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I184942183","host_organization_name":"University of Oslo","host_organization_lineage":["https://openalex.org/I184942183"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"info:eu-repo/semantics/bookPart"},{"id":"pmh:oai:munin.uit.no:10037/7563","is_oa":true,"landing_page_url":"https://hdl.handle.net/10037/7563","pdf_url":null,"source":{"id":"https://openalex.org/S4306401716","display_name":"Duo Research Archive (University of Oslo)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I184942183","host_organization_name":"University of Oslo","host_organization_lineage":["https://openalex.org/I184942183"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"info:eu-repo/semantics/bookPart"}],"best_oa_location":{"id":"pmh:oai:munin.uit.no:10037/6902","is_oa":true,"landing_page_url":"https://hdl.handle.net/10037/6902","pdf_url":null,"source":{"id":"https://openalex.org/S4306401716","display_name":"Duo Research Archive (University of Oslo)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I184942183","host_organization_name":"University of Oslo","host_organization_lineage":["https://openalex.org/I184942183"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"info:eu-repo/semantics/bookPart"},"sustainable_development_goals":[{"score":0.4000000059604645,"display_name":"Industry, innovation and infrastructure","id":"https://metadata.un.org/sdg/9"}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":37,"referenced_works":["https://openalex.org/W89823361","https://openalex.org/W180056467","https://openalex.org/W1480850417","https://openalex.org/W1568585972","https://openalex.org/W1609815973","https://openalex.org/W1845494277","https://openalex.org/W1967890297","https://openalex.org/W1978637977","https://openalex.org/W1992221283","https://openalex.org/W2002712879","https://openalex.org/W2005129098","https://openalex.org/W2010929544","https://openalex.org/W2052968292","https://openalex.org/W2055043387","https://openalex.org/W2057791956","https://openalex.org/W2100830825","https://openalex.org/W2100873784","https://openalex.org/W2103017472","https://openalex.org/W2107248520","https://openalex.org/W2119738171","https://openalex.org/W2130253098","https://openalex.org/W2135621733","https://openalex.org/W2136482257","https://openalex.org/W2139205321","https://openalex.org/W2141885858","https://openalex.org/W2144002928","https://openalex.org/W2155545841","https://openalex.org/W2156467546","https://openalex.org/W2157355837","https://openalex.org/W2160697532","https://openalex.org/W2206204485","https://openalex.org/W2483101662","https://openalex.org/W4210623056","https://openalex.org/W4239429564","https://openalex.org/W4242740445","https://openalex.org/W4243412959","https://openalex.org/W4405646406"],"related_works":["https://openalex.org/W2384167225","https://openalex.org/W2113182373","https://openalex.org/W2119005669","https://openalex.org/W2088998312","https://openalex.org/W4255195499","https://openalex.org/W2481793228","https://openalex.org/W2403214044","https://openalex.org/W2379604225","https://openalex.org/W2006196966","https://openalex.org/W2276618304"],"abstract_inverted_index":null,"counts_by_year":[{"year":2016,"cited_by_count":2},{"year":2015,"cited_by_count":2},{"year":2014,"cited_by_count":1}],"updated_date":"2026-04-05T17:49:38.594831","created_date":"2025-10-10T00:00:00"}
