{"id":"https://openalex.org/W78239168","doi":"https://doi.org/10.1007/978-3-642-41338-4_14","title":"Semantic Data and Models Sharing in Systems Biology: The Just Enough Results Model and the SEEK Platform","display_name":"Semantic Data and Models Sharing in Systems Biology: The Just Enough Results Model and the SEEK Platform","publication_year":2013,"publication_date":"2013-01-01","ids":{"openalex":"https://openalex.org/W78239168","doi":"https://doi.org/10.1007/978-3-642-41338-4_14","mag":"78239168"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-642-41338-4_14","is_oa":true,"landing_page_url":"https://doi.org/10.1007/978-3-642-41338-4_14","pdf_url":"https://link.springer.com/content/pdf/10.1007%2F978-3-642-41338-4_14.pdf","source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://link.springer.com/content/pdf/10.1007%2F978-3-642-41338-4_14.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5087859284","display_name":"Katherine Wolstencroft","orcid":"https://orcid.org/0000-0002-1279-5133"},"institutions":[{"id":"https://openalex.org/I121797337","display_name":"Leiden University","ror":"https://ror.org/027bh9e22","country_code":"NL","type":"education","lineage":["https://openalex.org/I121797337"]},{"id":"https://openalex.org/I28407311","display_name":"University of Manchester","ror":"https://ror.org/027m9bs27","country_code":"GB","type":"education","lineage":["https://openalex.org/I28407311"]}],"countries":["GB","NL"],"is_corresponding":false,"raw_author_name":"Katherine Wolstencroft","raw_affiliation_strings":["Leiden Institute of Advanced Computer Science, 2300 RA, Leiden, The Netherlands","School of Computer Science, University of Manchester, Oxford Road, Manchester, M13 9PL, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Leiden Institute of Advanced Computer Science, 2300 RA, Leiden, The Netherlands","institution_ids":["https://openalex.org/I121797337"]},{"raw_affiliation_string":"School of Computer Science, University of Manchester, Oxford Road, Manchester, M13 9PL, UK","institution_ids":["https://openalex.org/I28407311"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5022818385","display_name":"Stuart Owen","orcid":"https://orcid.org/0000-0003-2130-0865"},"institutions":[{"id":"https://openalex.org/I28407311","display_name":"University of Manchester","ror":"https://ror.org/027m9bs27","country_code":"GB","type":"education","lineage":["https://openalex.org/I28407311"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Stuart Owen","raw_affiliation_strings":["School of Computer Science, University of Manchester, Oxford Road, Manchester, M13 9PL, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computer Science, University of Manchester, Oxford Road, Manchester, M13 9PL, UK","institution_ids":["https://openalex.org/I28407311"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5042243911","display_name":"Olga Krebs","orcid":"https://orcid.org/0000-0003-3540-0402"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Olga Krebs","raw_affiliation_strings":["Schloss-Wolfsbrunnenweg 35, HITS gGmbH, Heidelberg, Germany, 69118"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Schloss-Wolfsbrunnenweg 35, HITS gGmbH, Heidelberg, Germany, 69118","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110622459","display_name":"Wolfgang M\u00fcller","orcid":"https://orcid.org/0000-0001-6474-3733"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Wolfgang Mueller","raw_affiliation_strings":["Schloss-Wolfsbrunnenweg 35, HITS gGmbH, Heidelberg, Germany, 69118"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Schloss-Wolfsbrunnenweg 35, HITS gGmbH, Heidelberg, Germany, 69118","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5044621619","display_name":"Quyen Le Hoang Thuy To Nguyen","orcid":"https://orcid.org/0000-0001-9254-2605"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Quyen Nguyen","raw_affiliation_strings":["Schloss-Wolfsbrunnenweg 35, HITS gGmbH, Heidelberg, Germany, 69118"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Schloss-Wolfsbrunnenweg 35, HITS gGmbH, Heidelberg, Germany, 69118","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5020530809","display_name":"Jacky L. Snoep","orcid":"https://orcid.org/0000-0002-0405-8854"},"institutions":[{"id":"https://openalex.org/I28407311","display_name":"University of Manchester","ror":"https://ror.org/027m9bs27","country_code":"GB","type":"education","lineage":["https://openalex.org/I28407311"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Jacky L. Snoep","raw_affiliation_strings":["School of Computer Science, University of Manchester, Oxford Road, Manchester, M13 9PL, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computer Science, University of Manchester, Oxford Road, Manchester, M13 9PL, UK","institution_ids":["https://openalex.org/I28407311"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5027899893","display_name":"Carole Goble","orcid":"https://orcid.org/0000-0003-1219-2137"},"institutions":[{"id":"https://openalex.org/I28407311","display_name":"University of Manchester","ror":"https://ror.org/027m9bs27","country_code":"GB","type":"education","lineage":["https://openalex.org/I28407311"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Carole Goble","raw_affiliation_strings":["School of Computer Science, University of Manchester, Oxford Road, Manchester, M13 9PL, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computer Science, University of Manchester, Oxford Road, Manchester, M13 9PL, UK","institution_ids":["https://openalex.org/I28407311"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":2,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":null,"has_fulltext":true,"cited_by_count":10,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"212","last_page":"227"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9945999979972839,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.9853000044822693,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8547281622886658},{"id":"https://openalex.org/keywords/data-sharing","display_name":"Data sharing","score":0.47415512800216675},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.3931868076324463},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.3871120810508728},{"id":"https://openalex.org/keywords/software-engineering","display_name":"Software engineering","score":0.3396090269088745},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3366813361644745},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.32717016339302063},{"id":"https://openalex.org/keywords/distributed-computing","display_name":"Distributed computing","score":0.3224809765815735}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8547281622886658},{"id":"https://openalex.org/C2779965156","wikidata":"https://www.wikidata.org/wiki/Q5227350","display_name":"Data sharing","level":3,"score":0.47415512800216675},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.3931868076324463},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.3871120810508728},{"id":"https://openalex.org/C115903868","wikidata":"https://www.wikidata.org/wiki/Q80993","display_name":"Software engineering","level":1,"score":0.3396090269088745},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3366813361644745},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.32717016339302063},{"id":"https://openalex.org/C120314980","wikidata":"https://www.wikidata.org/wiki/Q180634","display_name":"Distributed computing","level":1,"score":0.3224809765815735},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.0},{"id":"https://openalex.org/C204787440","wikidata":"https://www.wikidata.org/wiki/Q188504","display_name":"Alternative medicine","level":2,"score":0.0},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/978-3-642-41338-4_14","is_oa":true,"landing_page_url":"https://doi.org/10.1007/978-3-642-41338-4_14","pdf_url":"https://link.springer.com/content/pdf/10.1007%2F978-3-642-41338-4_14.pdf","source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"}],"best_oa_location":{"id":"doi:10.1007/978-3-642-41338-4_14","is_oa":true,"landing_page_url":"https://doi.org/10.1007/978-3-642-41338-4_14","pdf_url":"https://link.springer.com/content/pdf/10.1007%2F978-3-642-41338-4_14.pdf","source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/17","score":0.47999998927116394,"display_name":"Partnerships for the goals"}],"awards":[{"id":"https://openalex.org/G5918933644","display_name":"SysMO-DB2","funder_award_id":"BB/I004637/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"},{"id":"https://openalex.org/G744749362","display_name":null,"funder_award_id":"BB/I004637/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"}],"funders":[{"id":"https://openalex.org/F4320334629","display_name":"Biotechnology and Biological Sciences Research Council","ror":"https://ror.org/00cwqg982"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W78239168.pdf","grobid_xml":"https://content.openalex.org/works/W78239168.grobid-xml"},"referenced_works_count":17,"referenced_works":["https://openalex.org/W1524141331","https://openalex.org/W1527927437","https://openalex.org/W2008535044","https://openalex.org/W2019543926","https://openalex.org/W2050554833","https://openalex.org/W2064867081","https://openalex.org/W2107572678","https://openalex.org/W2107751776","https://openalex.org/W2108671185","https://openalex.org/W2116398954","https://openalex.org/W2126777664","https://openalex.org/W2129301079","https://openalex.org/W2130430745","https://openalex.org/W2145435867","https://openalex.org/W2165428180","https://openalex.org/W2165685472","https://openalex.org/W4233334497"],"related_works":["https://openalex.org/W4231937131","https://openalex.org/W323219885","https://openalex.org/W2063928587","https://openalex.org/W4292559016","https://openalex.org/W1589342014","https://openalex.org/W598950423","https://openalex.org/W4256673449","https://openalex.org/W2143331802","https://openalex.org/W2160964171","https://openalex.org/W1480341462"],"abstract_inverted_index":null,"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2024,"cited_by_count":1},{"year":2022,"cited_by_count":1},{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":2},{"year":2015,"cited_by_count":2},{"year":2014,"cited_by_count":1}],"updated_date":"2026-07-14T23:27:15.235271","created_date":"2025-10-10T00:00:00"}
