{"id":"https://openalex.org/W2178554820","doi":"https://doi.org/10.1007/978-3-642-40453-5_22","title":"Probabilistic Approaches to Alignment with Tandem Repeats","display_name":"Probabilistic Approaches to Alignment with Tandem Repeats","publication_year":2013,"publication_date":"2013-01-01","ids":{"openalex":"https://openalex.org/W2178554820","doi":"https://doi.org/10.1007/978-3-642-40453-5_22","mag":"2178554820"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-642-40453-5_22","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-642-40453-5_22","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5003058338","display_name":"Michal N\u00e1n\u00e1si","orcid":"https://orcid.org/0000-0002-2440-5446"},"institutions":[{"id":"https://openalex.org/I74788687","display_name":"Comenius University Bratislava","ror":"https://ror.org/0587ef340","country_code":"SK","type":"education","lineage":["https://openalex.org/I74788687"]}],"countries":["SK"],"is_corresponding":true,"raw_author_name":"Michal N\u00e1n\u00e1si","raw_affiliation_strings":["Faculty of Mathematics, Physics, and Informatics, Comenius University, Mlynsk\u00e1 dolina, 842 48, Bratislava, Slovakia"],"affiliations":[{"raw_affiliation_string":"Faculty of Mathematics, Physics, and Informatics, Comenius University, Mlynsk\u00e1 dolina, 842 48, Bratislava, Slovakia","institution_ids":["https://openalex.org/I74788687"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5053772564","display_name":"Tom\u00e1\u0161 Vina\u0159","orcid":"https://orcid.org/0000-0003-3898-3447"},"institutions":[{"id":"https://openalex.org/I74788687","display_name":"Comenius University Bratislava","ror":"https://ror.org/0587ef340","country_code":"SK","type":"education","lineage":["https://openalex.org/I74788687"]}],"countries":["SK"],"is_corresponding":false,"raw_author_name":"Tom\u00e1\u0161 Vina\u0159","raw_affiliation_strings":["Faculty of Mathematics, Physics, and Informatics, Comenius University, Mlynsk\u00e1 dolina, 842 48, Bratislava, Slovakia"],"affiliations":[{"raw_affiliation_string":"Faculty of Mathematics, Physics, and Informatics, Comenius University, Mlynsk\u00e1 dolina, 842 48, Bratislava, Slovakia","institution_ids":["https://openalex.org/I74788687"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5058053699","display_name":"Bro\u0148a Brejov\u00e1","orcid":"https://orcid.org/0000-0002-9483-1766"},"institutions":[{"id":"https://openalex.org/I74788687","display_name":"Comenius University Bratislava","ror":"https://ror.org/0587ef340","country_code":"SK","type":"education","lineage":["https://openalex.org/I74788687"]}],"countries":["SK"],"is_corresponding":false,"raw_author_name":"Bro\u0148a Brejov\u00e1","raw_affiliation_strings":["Faculty of Mathematics, Physics, and Informatics, Comenius University, Mlynsk\u00e1 dolina, 842 48, Bratislava, Slovakia"],"affiliations":[{"raw_affiliation_string":"Faculty of Mathematics, Physics, and Informatics, Comenius University, Mlynsk\u00e1 dolina, 842 48, Bratislava, Slovakia","institution_ids":["https://openalex.org/I74788687"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5003058338"],"corresponding_institution_ids":["https://openalex.org/I74788687"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.15651243,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"287","last_page":"299"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9987000226974487,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9919000267982483,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/decoding-methods","display_name":"Decoding methods","score":0.8237566351890564},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8123435378074646},{"id":"https://openalex.org/keywords/viterbi-algorithm","display_name":"Viterbi algorithm","score":0.7585717439651489},{"id":"https://openalex.org/keywords/hidden-markov-model","display_name":"Hidden Markov model","score":0.6943079233169556},{"id":"https://openalex.org/keywords/probabilistic-logic","display_name":"Probabilistic logic","score":0.5754454135894775},{"id":"https://openalex.org/keywords/sequential-decoding","display_name":"Sequential decoding","score":0.5497348308563232},{"id":"https://openalex.org/keywords/tandem-repeat","display_name":"Tandem repeat","score":0.5366818904876709},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.5242729187011719},{"id":"https://openalex.org/keywords/pairwise-comparison","display_name":"Pairwise comparison","score":0.49084097146987915},{"id":"https://openalex.org/keywords/markov-chain","display_name":"Markov chain","score":0.4826293885707855},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.4618154764175415},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.3420581817626953},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.31265074014663696},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.16848063468933105},{"id":"https://openalex.org/keywords/block-code","display_name":"Block code","score":0.15313440561294556}],"concepts":[{"id":"https://openalex.org/C57273362","wikidata":"https://www.wikidata.org/wiki/Q576722","display_name":"Decoding methods","level":2,"score":0.8237566351890564},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8123435378074646},{"id":"https://openalex.org/C60582962","wikidata":"https://www.wikidata.org/wiki/Q83886","display_name":"Viterbi algorithm","level":3,"score":0.7585717439651489},{"id":"https://openalex.org/C23224414","wikidata":"https://www.wikidata.org/wiki/Q176769","display_name":"Hidden Markov model","level":2,"score":0.6943079233169556},{"id":"https://openalex.org/C49937458","wikidata":"https://www.wikidata.org/wiki/Q2599292","display_name":"Probabilistic logic","level":2,"score":0.5754454135894775},{"id":"https://openalex.org/C193969084","wikidata":"https://www.wikidata.org/wiki/Q7452500","display_name":"Sequential decoding","level":4,"score":0.5497348308563232},{"id":"https://openalex.org/C27149982","wikidata":"https://www.wikidata.org/wiki/Q3456514","display_name":"Tandem repeat","level":4,"score":0.5366818904876709},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.5242729187011719},{"id":"https://openalex.org/C184898388","wikidata":"https://www.wikidata.org/wiki/Q1435712","display_name":"Pairwise comparison","level":2,"score":0.49084097146987915},{"id":"https://openalex.org/C98763669","wikidata":"https://www.wikidata.org/wiki/Q176645","display_name":"Markov chain","level":2,"score":0.4826293885707855},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.4618154764175415},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.3420581817626953},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.31265074014663696},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.16848063468933105},{"id":"https://openalex.org/C157125643","wikidata":"https://www.wikidata.org/wiki/Q884707","display_name":"Block code","level":3,"score":0.15313440561294556},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.0},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.0},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1007/978-3-642-40453-5_22","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-642-40453-5_22","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.745.6149","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.745.6149","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://arxiv.org/pdf/1307.7861.pdf","raw_type":"text"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":24,"referenced_works":["https://openalex.org/W40131888","https://openalex.org/W1786896381","https://openalex.org/W1997631042","https://openalex.org/W2009570821","https://openalex.org/W2028709282","https://openalex.org/W2071749306","https://openalex.org/W2073234837","https://openalex.org/W2074231493","https://openalex.org/W2100918885","https://openalex.org/W2101497682","https://openalex.org/W2106263380","https://openalex.org/W2106463211","https://openalex.org/W2112814753","https://openalex.org/W2118062131","https://openalex.org/W2132926880","https://openalex.org/W2149459456","https://openalex.org/W2156338262","https://openalex.org/W2157314679","https://openalex.org/W2382695984","https://openalex.org/W2406495759","https://openalex.org/W2610493105","https://openalex.org/W2611340485","https://openalex.org/W4245668478","https://openalex.org/W6806875027"],"related_works":["https://openalex.org/W2136652457","https://openalex.org/W2169849734","https://openalex.org/W2116722627","https://openalex.org/W2385954530","https://openalex.org/W2129150969","https://openalex.org/W1975869217","https://openalex.org/W2236912844","https://openalex.org/W2401728283","https://openalex.org/W2383829109","https://openalex.org/W2379938888"],"abstract_inverted_index":null,"counts_by_year":[],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}