{"id":"https://openalex.org/W190053699","doi":"https://doi.org/10.1007/978-3-642-40193-0_4","title":"When and How the Perfect Phylogeny Model Explains Evolution","display_name":"When and How the Perfect Phylogeny Model Explains Evolution","publication_year":2013,"publication_date":"2013-10-10","ids":{"openalex":"https://openalex.org/W190053699","doi":"https://doi.org/10.1007/978-3-642-40193-0_4","mag":"190053699"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-642-40193-0_4","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-642-40193-0_4","pdf_url":null,"source":{"id":"https://openalex.org/S4210186097","display_name":"Natural computing series","issn_l":"1619-7127","issn":["1619-7127","2627-6461"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Natural Computing Series","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5038691764","display_name":"Paola Bonizzoni","orcid":"https://orcid.org/0000-0001-7289-4988"},"institutions":[{"id":"https://openalex.org/I66752286","display_name":"University of Milano-Bicocca","ror":"https://ror.org/01ynf4891","country_code":"IT","type":"education","lineage":["https://openalex.org/I66752286"]}],"countries":["IT"],"is_corresponding":true,"raw_author_name":"Paola Bonizzoni","raw_affiliation_strings":["DISCo, Universit\u00e0 degli Studi di Milano\u2013Bicocca, Milan, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"DISCo, Universit\u00e0 degli Studi di Milano\u2013Bicocca, Milan, Italy","institution_ids":["https://openalex.org/I66752286"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5043161270","display_name":"Anna Paola Carrieri","orcid":"https://orcid.org/0000-0003-2349-1896"},"institutions":[{"id":"https://openalex.org/I66752286","display_name":"University of Milano-Bicocca","ror":"https://ror.org/01ynf4891","country_code":"IT","type":"education","lineage":["https://openalex.org/I66752286"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Anna Paola Carrieri","raw_affiliation_strings":["DISCo, Universit\u00e0 degli Studi di Milano\u2013Bicocca, Milan, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"DISCo, Universit\u00e0 degli Studi di Milano\u2013Bicocca, Milan, Italy","institution_ids":["https://openalex.org/I66752286"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5059679442","display_name":"Gianluca Della Vedova","orcid":"https://orcid.org/0000-0001-5584-3089"},"institutions":[{"id":"https://openalex.org/I66752286","display_name":"University of Milano-Bicocca","ror":"https://ror.org/01ynf4891","country_code":"IT","type":"education","lineage":["https://openalex.org/I66752286"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Gianluca Della Vedova","raw_affiliation_strings":["DISCo, Universit\u00e0 degli Studi di Milano\u2013Bicocca, Milan, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"DISCo, Universit\u00e0 degli Studi di Milano\u2013Bicocca, Milan, Italy","institution_ids":["https://openalex.org/I66752286"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110357719","display_name":"Riccardo Dondi","orcid":null},"institutions":[{"id":"https://openalex.org/I11039511","display_name":"University of Bergamo","ror":"https://ror.org/02mbd5571","country_code":"IT","type":"education","lineage":["https://openalex.org/I11039511"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Riccardo Dondi","raw_affiliation_strings":["Dipartimento di Scienze Umane e Sociali, Universit\u00e0 degli Studi di Bergamo, Bergamo, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Dipartimento di Scienze Umane e Sociali, Universit\u00e0 degli Studi di Bergamo, Bergamo, Italy","institution_ids":["https://openalex.org/I11039511"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5089548776","display_name":"Teresa M. Przytycka","orcid":"https://orcid.org/0000-0002-6261-277X"},"institutions":[{"id":"https://openalex.org/I1299303238","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88","country_code":"US","type":"government","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238"]},{"id":"https://openalex.org/I4210109390","display_name":"National Center for Biotechnology Information","ror":"https://ror.org/02meqm098","country_code":"US","type":"facility","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238","https://openalex.org/I2800548410","https://openalex.org/I4210109390"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Teresa M. Przytycka","raw_affiliation_strings":["National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD, USA","institution_ids":["https://openalex.org/I1299303238","https://openalex.org/I4210109390"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5038691764"],"corresponding_institution_ids":["https://openalex.org/I66752286"],"apc_list":null,"apc_paid":null,"fwci":5.4319,"has_fulltext":false,"cited_by_count":13,"citation_normalized_percentile":{"value":0.95489821,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":null,"issue":null,"first_page":"67","last_page":"83"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9980000257492065,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9980000257492065,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T13664","display_name":"Genome Rearrangement Algorithms","score":0.9918000102043152,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9900000095367432,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/phylogenetics","display_name":"Phylogenetics","score":0.6249205470085144},{"id":"https://openalex.org/keywords/maximum-parsimony","display_name":"Maximum parsimony","score":0.6099603176116943},{"id":"https://openalex.org/keywords/focus","display_name":"Focus (optics)","score":0.5187252163887024},{"id":"https://openalex.org/keywords/character","display_name":"Character (mathematics)","score":0.5107104778289795},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.49039435386657715},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.4533693790435791},{"id":"https://openalex.org/keywords/graph","display_name":"Graph","score":0.4482352137565613},{"id":"https://openalex.org/keywords/field","display_name":"Field (mathematics)","score":0.44521480798721313},{"id":"https://openalex.org/keywords/tree","display_name":"Tree (set theory)","score":0.43145716190338135},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.32909834384918213},{"id":"https://openalex.org/keywords/evolutionary-biology","display_name":"Evolutionary biology","score":0.3247866630554199},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.227340966463089},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.2032003104686737},{"id":"https://openalex.org/keywords/combinatorics","display_name":"Combinatorics","score":0.12960752844810486},{"id":"https://openalex.org/keywords/clade","display_name":"Clade","score":0.08260416984558105},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.08223053812980652},{"id":"https://openalex.org/keywords/pure-mathematics","display_name":"Pure mathematics","score":0.07977885007858276},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.07269448041915894}],"concepts":[{"id":"https://openalex.org/C90132467","wikidata":"https://www.wikidata.org/wiki/Q171184","display_name":"Phylogenetics","level":3,"score":0.6249205470085144},{"id":"https://openalex.org/C22799545","wikidata":"https://www.wikidata.org/wiki/Q1805805","display_name":"Maximum parsimony","level":5,"score":0.6099603176116943},{"id":"https://openalex.org/C192209626","wikidata":"https://www.wikidata.org/wiki/Q190909","display_name":"Focus (optics)","level":2,"score":0.5187252163887024},{"id":"https://openalex.org/C2780861071","wikidata":"https://www.wikidata.org/wiki/Q1062934","display_name":"Character (mathematics)","level":2,"score":0.5107104778289795},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.49039435386657715},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.4533693790435791},{"id":"https://openalex.org/C132525143","wikidata":"https://www.wikidata.org/wiki/Q141488","display_name":"Graph","level":2,"score":0.4482352137565613},{"id":"https://openalex.org/C9652623","wikidata":"https://www.wikidata.org/wiki/Q190109","display_name":"Field (mathematics)","level":2,"score":0.44521480798721313},{"id":"https://openalex.org/C113174947","wikidata":"https://www.wikidata.org/wiki/Q2859736","display_name":"Tree (set theory)","level":2,"score":0.43145716190338135},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.32909834384918213},{"id":"https://openalex.org/C78458016","wikidata":"https://www.wikidata.org/wiki/Q840400","display_name":"Evolutionary biology","level":1,"score":0.3247866630554199},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.227340966463089},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.2032003104686737},{"id":"https://openalex.org/C114614502","wikidata":"https://www.wikidata.org/wiki/Q76592","display_name":"Combinatorics","level":1,"score":0.12960752844810486},{"id":"https://openalex.org/C44465124","wikidata":"https://www.wikidata.org/wiki/Q713623","display_name":"Clade","level":4,"score":0.08260416984558105},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.08223053812980652},{"id":"https://openalex.org/C202444582","wikidata":"https://www.wikidata.org/wiki/Q837863","display_name":"Pure mathematics","level":1,"score":0.07977885007858276},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.07269448041915894},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0},{"id":"https://openalex.org/C2524010","wikidata":"https://www.wikidata.org/wiki/Q8087","display_name":"Geometry","level":1,"score":0.0},{"id":"https://openalex.org/C120665830","wikidata":"https://www.wikidata.org/wiki/Q14620","display_name":"Optics","level":1,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1007/978-3-642-40193-0_4","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-642-40193-0_4","pdf_url":null,"source":{"id":"https://openalex.org/S4210186097","display_name":"Natural computing series","issn_l":"1619-7127","issn":["1619-7127","2627-6461"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Natural Computing Series","raw_type":"book-chapter"},{"id":"pmh:oai:aisberg.unibg.it:10446/32353","is_oa":false,"landing_page_url":"http://link.springer.com/book/10.1007/978-3-642-40193-0","pdf_url":null,"source":{"id":"https://openalex.org/S4377196347","display_name":"Aisberg (University of Bergamo)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I11039511","host_organization_name":"University of Bergamo","host_organization_lineage":["https://openalex.org/I11039511"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"info:eu-repo/semantics/bookPart"},{"id":"pmh:oai:boa.unimib.it:10281/56662","is_oa":false,"landing_page_url":"http://hdl.handle.net/10281/56662","pdf_url":null,"source":{"id":"https://openalex.org/S4306401259","display_name":"BOA (University of Milano-Bicocca)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I66752286","host_organization_name":"University of Milano-Bicocca","host_organization_lineage":["https://openalex.org/I66752286"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"info:eu-repo/semantics/bookPart"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":39,"referenced_works":["https://openalex.org/W938539187","https://openalex.org/W1504581534","https://openalex.org/W1589640109","https://openalex.org/W1604950872","https://openalex.org/W1990061958","https://openalex.org/W2005193052","https://openalex.org/W2005915210","https://openalex.org/W2008323735","https://openalex.org/W2011039300","https://openalex.org/W2016279534","https://openalex.org/W2020687920","https://openalex.org/W2031170804","https://openalex.org/W2043685803","https://openalex.org/W2047011629","https://openalex.org/W2065288894","https://openalex.org/W2066356146","https://openalex.org/W2069161802","https://openalex.org/W2072719910","https://openalex.org/W2075495614","https://openalex.org/W2081254453","https://openalex.org/W2083213362","https://openalex.org/W2107554614","https://openalex.org/W2108916118","https://openalex.org/W2120653759","https://openalex.org/W2120854648","https://openalex.org/W2143474538","https://openalex.org/W2152766058","https://openalex.org/W2155316689","https://openalex.org/W2156043130","https://openalex.org/W2157751858","https://openalex.org/W2320198223","https://openalex.org/W2323517320","https://openalex.org/W2401610261","https://openalex.org/W2610179052","https://openalex.org/W2913688336","https://openalex.org/W4233815609","https://openalex.org/W4241418020","https://openalex.org/W4285719527","https://openalex.org/W4292230561"],"related_works":["https://openalex.org/W4251972423","https://openalex.org/W1503216044","https://openalex.org/W2393609567","https://openalex.org/W2369369044","https://openalex.org/W2354143083","https://openalex.org/W2372906645","https://openalex.org/W2784933348","https://openalex.org/W2088272905","https://openalex.org/W2286790072","https://openalex.org/W4200598490"],"abstract_inverted_index":null,"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":2},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":1},{"year":2017,"cited_by_count":2},{"year":2016,"cited_by_count":3},{"year":2015,"cited_by_count":2},{"year":2014,"cited_by_count":1}],"updated_date":"2026-07-22T07:51:19.307946","created_date":"2025-10-10T00:00:00"}
