{"id":"https://openalex.org/W144829900","doi":"https://doi.org/10.1007/978-3-642-37137-0_3","title":"Inferring E. coli SOS Response Pathway from Gene Expression Data Using IST-DBN with Time Lag Estimation","display_name":"Inferring E. coli SOS Response Pathway from Gene Expression Data Using IST-DBN with Time Lag Estimation","publication_year":2013,"publication_date":"2013-01-01","ids":{"openalex":"https://openalex.org/W144829900","doi":"https://doi.org/10.1007/978-3-642-37137-0_3","mag":"144829900"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-642-37137-0_3","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-642-37137-0_3","pdf_url":null,"source":{"id":"https://openalex.org/S2764461748","display_name":"Studies in computational intelligence","issn_l":"1860-949X","issn":["1860-949X","1860-9503"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319965","host_organization_name":"Springer Nature","host_organization_lineage":["https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in Computational Intelligence","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5069051802","display_name":"Lian En Chai","orcid":null},"institutions":[{"id":"https://openalex.org/I4576418","display_name":"University of Technology Malaysia","ror":"https://ror.org/026w31v75","country_code":"MY","type":"education","lineage":["https://openalex.org/I4576418"]}],"countries":["MY"],"is_corresponding":true,"raw_author_name":"Lian En Chai","raw_affiliation_strings":["Artificial Intelligence and Bioinformatics Research Group, Faculty of Computer Science and Information Systems, Universiti Teknologi Malaysia, Skudai, 81310, Johor, Malaysia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Artificial Intelligence and Bioinformatics Research Group, Faculty of Computer Science and Information Systems, Universiti Teknologi Malaysia, Skudai, 81310, Johor, Malaysia","institution_ids":["https://openalex.org/I4576418"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5085034566","display_name":"Mohd Saberi Mohamad","orcid":"https://orcid.org/0000-0002-1079-4559"},"institutions":[{"id":"https://openalex.org/I4576418","display_name":"University of Technology Malaysia","ror":"https://ror.org/026w31v75","country_code":"MY","type":"education","lineage":["https://openalex.org/I4576418"]}],"countries":["MY"],"is_corresponding":false,"raw_author_name":"Mohd Saberi Mohamad","raw_affiliation_strings":["Artificial Intelligence and Bioinformatics Research Group, Faculty of Computer Science and Information Systems, Universiti Teknologi Malaysia, Skudai, 81310, Johor, Malaysia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Artificial Intelligence and Bioinformatics Research Group, Faculty of Computer Science and Information Systems, Universiti Teknologi Malaysia, Skudai, 81310, Johor, Malaysia","institution_ids":["https://openalex.org/I4576418"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5108483457","display_name":"Safaai Deris","orcid":null},"institutions":[{"id":"https://openalex.org/I4576418","display_name":"University of Technology Malaysia","ror":"https://ror.org/026w31v75","country_code":"MY","type":"education","lineage":["https://openalex.org/I4576418"]}],"countries":["MY"],"is_corresponding":false,"raw_author_name":"Safaai Deris","raw_affiliation_strings":["Artificial Intelligence and Bioinformatics Research Group, Faculty of Computer Science and Information Systems, Universiti Teknologi Malaysia, Skudai, 81310, Johor, Malaysia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Artificial Intelligence and Bioinformatics Research Group, Faculty of Computer Science and Information Systems, Universiti Teknologi Malaysia, Skudai, 81310, Johor, Malaysia","institution_ids":["https://openalex.org/I4576418"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5059076481","display_name":"Chuii Khim Chong","orcid":null},"institutions":[{"id":"https://openalex.org/I4576418","display_name":"University of Technology Malaysia","ror":"https://ror.org/026w31v75","country_code":"MY","type":"education","lineage":["https://openalex.org/I4576418"]}],"countries":["MY"],"is_corresponding":false,"raw_author_name":"Chuii Khim Chong","raw_affiliation_strings":["Artificial Intelligence and Bioinformatics Research Group, Faculty of Computer Science and Information Systems, Universiti Teknologi Malaysia, Skudai, 81310, Johor, Malaysia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Artificial Intelligence and Bioinformatics Research Group, Faculty of Computer Science and Information Systems, Universiti Teknologi Malaysia, Skudai, 81310, Johor, Malaysia","institution_ids":["https://openalex.org/I4576418"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5081045152","display_name":"Yee Wen Choon","orcid":"https://orcid.org/0000-0003-0787-5945"},"institutions":[{"id":"https://openalex.org/I4576418","display_name":"University of Technology Malaysia","ror":"https://ror.org/026w31v75","country_code":"MY","type":"education","lineage":["https://openalex.org/I4576418"]}],"countries":["MY"],"is_corresponding":false,"raw_author_name":"Yee Wen Choon","raw_affiliation_strings":["Artificial Intelligence and Bioinformatics Research Group, Faculty of Computer Science and Information Systems, Universiti Teknologi Malaysia, Skudai, 81310, Johor, Malaysia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Artificial Intelligence and Bioinformatics Research Group, Faculty of Computer Science and Information Systems, Universiti Teknologi Malaysia, Skudai, 81310, Johor, Malaysia","institution_ids":["https://openalex.org/I4576418"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5069051802"],"corresponding_institution_ids":["https://openalex.org/I4576418"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.07009346,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"5","last_page":"14"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9976000189781189,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9933000206947327,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/dynamic-bayesian-network","display_name":"Dynamic Bayesian network","score":0.8486157655715942},{"id":"https://openalex.org/keywords/inference","display_name":"Inference","score":0.6263958215713501},{"id":"https://openalex.org/keywords/gene-regulatory-network","display_name":"Gene regulatory network","score":0.5701279640197754},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5630788207054138},{"id":"https://openalex.org/keywords/missing-data","display_name":"Missing data","score":0.5382407307624817},{"id":"https://openalex.org/keywords/imputation","display_name":"Imputation (statistics)","score":0.5169824361801147},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5025231838226318},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.44389113783836365},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.39894282817840576},{"id":"https://openalex.org/keywords/bayesian-probability","display_name":"Bayesian probability","score":0.39474883675575256},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.3519768714904785},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.31047120690345764},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.22495737671852112},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.18102270364761353}],"concepts":[{"id":"https://openalex.org/C82142266","wikidata":"https://www.wikidata.org/wiki/Q3456604","display_name":"Dynamic Bayesian network","level":3,"score":0.8486157655715942},{"id":"https://openalex.org/C2776214188","wikidata":"https://www.wikidata.org/wiki/Q408386","display_name":"Inference","level":2,"score":0.6263958215713501},{"id":"https://openalex.org/C67339327","wikidata":"https://www.wikidata.org/wiki/Q1502576","display_name":"Gene regulatory network","level":4,"score":0.5701279640197754},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5630788207054138},{"id":"https://openalex.org/C9357733","wikidata":"https://www.wikidata.org/wiki/Q6878417","display_name":"Missing data","level":2,"score":0.5382407307624817},{"id":"https://openalex.org/C58041806","wikidata":"https://www.wikidata.org/wiki/Q1660484","display_name":"Imputation (statistics)","level":3,"score":0.5169824361801147},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5025231838226318},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.44389113783836365},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.39894282817840576},{"id":"https://openalex.org/C107673813","wikidata":"https://www.wikidata.org/wiki/Q812534","display_name":"Bayesian probability","level":2,"score":0.39474883675575256},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.3519768714904785},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.31047120690345764},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.22495737671852112},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.18102270364761353}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/978-3-642-37137-0_3","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-642-37137-0_3","pdf_url":null,"source":{"id":"https://openalex.org/S2764461748","display_name":"Studies in computational intelligence","issn_l":"1860-949X","issn":["1860-949X","1860-9503"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319965","host_organization_name":"Springer Nature","host_organization_lineage":["https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in Computational Intelligence","raw_type":"book-chapter"}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.5199999809265137,"id":"https://metadata.un.org/sdg/2","display_name":"Zero hunger"}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":17,"referenced_works":["https://openalex.org/W89551800","https://openalex.org/W324736132","https://openalex.org/W1965576512","https://openalex.org/W1996264210","https://openalex.org/W2006877085","https://openalex.org/W2062029454","https://openalex.org/W2103453943","https://openalex.org/W2110598359","https://openalex.org/W2114933215","https://openalex.org/W2115428292","https://openalex.org/W2116642156","https://openalex.org/W2119253710","https://openalex.org/W2121995533","https://openalex.org/W2136714708","https://openalex.org/W2146856779","https://openalex.org/W2169950095","https://openalex.org/W2611370172"],"related_works":["https://openalex.org/W2181530120","https://openalex.org/W4211215373","https://openalex.org/W2024529227","https://openalex.org/W1574575415","https://openalex.org/W3144172081","https://openalex.org/W3179858851","https://openalex.org/W3028371478","https://openalex.org/W2081476516","https://openalex.org/W2581984549","https://openalex.org/W3123177881"],"abstract_inverted_index":null,"counts_by_year":[],"updated_date":"2026-08-04T08:18:43.703281","created_date":"2025-10-10T00:00:00"}
