{"id":"https://openalex.org/W200064485","doi":"https://doi.org/10.1007/978-3-642-35686-5_12","title":"Complementing Kernel-Based Visualization of Protein Sequences with Their Phylogenetic Tree","display_name":"Complementing Kernel-Based Visualization of Protein Sequences with Their Phylogenetic Tree","publication_year":2012,"publication_date":"2012-01-01","ids":{"openalex":"https://openalex.org/W200064485","doi":"https://doi.org/10.1007/978-3-642-35686-5_12","mag":"200064485"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-642-35686-5_12","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-642-35686-5_12","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"http://hdl.handle.net/2117/17985","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5109993375","display_name":"Martha C\u00e1rdenas","orcid":null},"institutions":[{"id":"https://openalex.org/I9617848","display_name":"Universitat Polit\u00e8cnica de Catalunya","ror":"https://ror.org/03mb6wj31","country_code":"ES","type":"education","lineage":["https://openalex.org/I9617848"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Martha Iv\u00f3n C\u00e1rdenas","raw_affiliation_strings":["Departament de Llenguatges i Sistemes Inform\u00e0tics, Universitat Polit\u00e8cnica de Catalunya, 08034, Barcelona, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Departament de Llenguatges i Sistemes Inform\u00e0tics, Universitat Polit\u00e8cnica de Catalunya, 08034, Barcelona, Spain","institution_ids":["https://openalex.org/I9617848"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5069425032","display_name":"Alfredo Vellido","orcid":"https://orcid.org/0000-0002-9843-1911"},"institutions":[{"id":"https://openalex.org/I9617848","display_name":"Universitat Polit\u00e8cnica de Catalunya","ror":"https://ror.org/03mb6wj31","country_code":"ES","type":"education","lineage":["https://openalex.org/I9617848"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Alfredo Vellido","raw_affiliation_strings":["Departament de Llenguatges i Sistemes Inform\u00e0tics, Universitat Polit\u00e8cnica de Catalunya, 08034, Barcelona, Spain","Dpto. de Lenguajes y Sistemas Inform\u00e1ticos (LSI), Universidad Politecnica de la Catalunya, C/Jordi Girona 1-3, Ed. Omega, 08034, Barcelona, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Departament de Llenguatges i Sistemes Inform\u00e0tics, Universitat Polit\u00e8cnica de Catalunya, 08034, Barcelona, Spain","institution_ids":["https://openalex.org/I9617848"]},{"raw_affiliation_string":"Dpto. de Lenguajes y Sistemas Inform\u00e1ticos (LSI), Universidad Politecnica de la Catalunya, C/Jordi Girona 1-3, Ed. Omega, 08034, Barcelona, Spain","institution_ids":["https://openalex.org/I9617848"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5028083196","display_name":"Iv\u00e1n Olier","orcid":"https://orcid.org/0000-0002-5679-7501"},"institutions":[{"id":"https://openalex.org/I28407311","display_name":"University of Manchester","ror":"https://ror.org/027m9bs27","country_code":"GB","type":"education","lineage":["https://openalex.org/I28407311"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Iv\u00e1n Olier","raw_affiliation_strings":["School of Psychological Sciences, The University of Manchester, M13 9PL, Manchester, United Kingdom"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Psychological Sciences, The University of Manchester, M13 9PL, Manchester, United Kingdom","institution_ids":["https://openalex.org/I28407311"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5089054159","display_name":"Xavier Rovira","orcid":"https://orcid.org/0000-0002-9764-9927"},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I19894307","display_name":"Universit\u00e9 de Montpellier","ror":"https://ror.org/051escj72","country_code":"FR","type":"education","lineage":["https://openalex.org/I19894307"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Xavier Rovira","raw_affiliation_strings":["Department of Molecular Pharmacology Institute of Functional Genomics (IGF) CNRS UMR5203, INSERM U661, University of Montpellier, 141 rue de la Cardonille, F34094, Montpellier cedex 5, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Molecular Pharmacology Institute of Functional Genomics (IGF) CNRS UMR5203, INSERM U661, University of Montpellier, 141 rue de la Cardonille, F34094, Montpellier cedex 5, France","institution_ids":["https://openalex.org/I154526488","https://openalex.org/I19894307","https://openalex.org/I1294671590"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5088909083","display_name":"Jes\u00fas Giraldo","orcid":"https://orcid.org/0000-0001-7082-4695"},"institutions":[{"id":"https://openalex.org/I123044942","display_name":"Universitat Aut\u00f2noma de Barcelona","ror":"https://ror.org/052g8jq94","country_code":"ES","type":"education","lineage":["https://openalex.org/I123044942"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Jes\u00fas Giraldo","raw_affiliation_strings":["Institut de Neuroci\u00e8ncies, Unitat de Bioestad\u00edstica, Universitat Aut\u00f2noma de Barcelona, 08193, Bellaterra, Barcelona, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institut de Neuroci\u00e8ncies, Unitat de Bioestad\u00edstica, Universitat Aut\u00f2noma de Barcelona, 08193, Bellaterra, Barcelona, Spain","institution_ids":["https://openalex.org/I123044942"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":6,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":2.7608,"has_fulltext":false,"cited_by_count":5,"citation_normalized_percentile":{"value":0.90924933,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":98},"biblio":{"volume":null,"issue":null,"first_page":"136","last_page":"149"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11178","display_name":"Receptor Mechanisms and Signaling","score":0.9977999925613403,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11178","display_name":"Receptor Mechanisms and Signaling","score":0.9977999925613403,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9976000189781189,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9945999979972839,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7071748375892639},{"id":"https://openalex.org/keywords/phylogenetic-tree","display_name":"Phylogenetic tree","score":0.6881283521652222},{"id":"https://openalex.org/keywords/kernel","display_name":"Kernel (algebra)","score":0.6226742267608643},{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.6063042879104614},{"id":"https://openalex.org/keywords/focus","display_name":"Focus (optics)","score":0.5327484607696533},{"id":"https://openalex.org/keywords/tree","display_name":"Tree (set theory)","score":0.46765464544296265},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.419864684343338},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.40419575572013855},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3760409355163574},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.16739404201507568},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.12581443786621094},{"id":"https://openalex.org/keywords/discrete-mathematics","display_name":"Discrete mathematics","score":0.08565899729728699},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.08217763900756836}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7071748375892639},{"id":"https://openalex.org/C193252679","wikidata":"https://www.wikidata.org/wiki/Q242125","display_name":"Phylogenetic tree","level":3,"score":0.6881283521652222},{"id":"https://openalex.org/C74193536","wikidata":"https://www.wikidata.org/wiki/Q574844","display_name":"Kernel (algebra)","level":2,"score":0.6226742267608643},{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.6063042879104614},{"id":"https://openalex.org/C192209626","wikidata":"https://www.wikidata.org/wiki/Q190909","display_name":"Focus (optics)","level":2,"score":0.5327484607696533},{"id":"https://openalex.org/C113174947","wikidata":"https://www.wikidata.org/wiki/Q2859736","display_name":"Tree (set theory)","level":2,"score":0.46765464544296265},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.419864684343338},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.40419575572013855},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3760409355163574},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.16739404201507568},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.12581443786621094},{"id":"https://openalex.org/C118615104","wikidata":"https://www.wikidata.org/wiki/Q121416","display_name":"Discrete mathematics","level":1,"score":0.08565899729728699},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.08217763900756836},{"id":"https://openalex.org/C120665830","wikidata":"https://www.wikidata.org/wiki/Q14620","display_name":"Optics","level":1,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1007/978-3-642-35686-5_12","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-642-35686-5_12","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},{"id":"pmh:oai:www.recercat.cat:2072/207416","is_oa":true,"landing_page_url":"http://hdl.handle.net/2117/17985","pdf_url":null,"source":{"id":"https://openalex.org/S4306402147","display_name":"RECERCAT (Consorci de Serveis Universitaris de Catalunya)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210090028","host_organization_name":"Consorci de Serveis Universitaris de Catalunya","host_organization_lineage":["https://openalex.org/I4210090028"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"","raw_type":"info:eu-repo/semantics/bookPart"}],"best_oa_location":{"id":"pmh:oai:www.recercat.cat:2072/207416","is_oa":true,"landing_page_url":"http://hdl.handle.net/2117/17985","pdf_url":null,"source":{"id":"https://openalex.org/S4306402147","display_name":"RECERCAT (Consorci de Serveis Universitaris de Catalunya)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210090028","host_organization_name":"Consorci de Serveis Universitaris de Catalunya","host_organization_lineage":["https://openalex.org/I4210090028"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"","raw_type":"info:eu-repo/semantics/bookPart"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":21,"referenced_works":["https://openalex.org/W69955578","https://openalex.org/W1498183065","https://openalex.org/W1515594846","https://openalex.org/W1542652324","https://openalex.org/W1603274157","https://openalex.org/W1965648329","https://openalex.org/W1968682237","https://openalex.org/W1991426267","https://openalex.org/W2026480276","https://openalex.org/W2029195137","https://openalex.org/W2057791956","https://openalex.org/W2073110681","https://openalex.org/W2087407051","https://openalex.org/W2099930159","https://openalex.org/W2107636931","https://openalex.org/W2113483659","https://openalex.org/W2120772351","https://openalex.org/W2143210482","https://openalex.org/W2229908198","https://openalex.org/W2394669040","https://openalex.org/W4251828057"],"related_works":["https://openalex.org/W2068608913","https://openalex.org/W4312203868","https://openalex.org/W3124914020","https://openalex.org/W2069013776","https://openalex.org/W2059637021","https://openalex.org/W2038264393","https://openalex.org/W2362218761","https://openalex.org/W2062354928","https://openalex.org/W2113708670","https://openalex.org/W2088120817"],"abstract_inverted_index":null,"counts_by_year":[{"year":2015,"cited_by_count":1},{"year":2014,"cited_by_count":4}],"updated_date":"2026-07-02T09:51:11.867554","created_date":"2025-10-10T00:00:00"}
