{"id":"https://openalex.org/W90077054","doi":"https://doi.org/10.1007/978-3-642-31927-3_5","title":"RNA Folding Algorithms with G-Quadruplexes","display_name":"RNA Folding Algorithms with G-Quadruplexes","publication_year":2012,"publication_date":"2012-01-01","ids":{"openalex":"https://openalex.org/W90077054","doi":"https://doi.org/10.1007/978-3-642-31927-3_5","mag":"90077054"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-642-31927-3_5","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-642-31927-3_5","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5086178125","display_name":"Ronny Lorenz","orcid":"https://orcid.org/0000-0002-2144-698X"},"institutions":[{"id":"https://openalex.org/I129774422","display_name":"University of Vienna","ror":"https://ror.org/03prydq77","country_code":"AT","type":"education","lineage":["https://openalex.org/I129774422"]}],"countries":["AT"],"is_corresponding":true,"raw_author_name":"Ronny Lorenz","raw_affiliation_strings":["Dept. Theoretical Chemistry, Univ. Vienna, Wien, Austria"],"affiliations":[{"raw_affiliation_string":"Dept. Theoretical Chemistry, Univ. Vienna, Wien, Austria","institution_ids":["https://openalex.org/I129774422"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5034829404","display_name":"Stephan Wolf","orcid":null},"institutions":[{"id":"https://openalex.org/I926574661","display_name":"Leipzig University","ror":"https://ror.org/03s7gtk40","country_code":"DE","type":"education","lineage":["https://openalex.org/I926574661"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Stephan H. Bernhart","raw_affiliation_strings":["Dept. Computer Science, and Interdisciplinary Center for Bioinformatics, Univ. Leipzig, Leipzig, Germany"],"affiliations":[{"raw_affiliation_string":"Dept. Computer Science, and Interdisciplinary Center for Bioinformatics, Univ. Leipzig, Leipzig, Germany","institution_ids":["https://openalex.org/I926574661"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5111389452","display_name":"Fabian Externbrink","orcid":null},"institutions":[{"id":"https://openalex.org/I926574661","display_name":"Leipzig University","ror":"https://ror.org/03s7gtk40","country_code":"DE","type":"education","lineage":["https://openalex.org/I926574661"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Fabian Externbrink","raw_affiliation_strings":["Dept. Computer Science, and Interdisciplinary Center for Bioinformatics, Univ. Leipzig, Leipzig, Germany"],"affiliations":[{"raw_affiliation_string":"Dept. Computer Science, and Interdisciplinary Center for Bioinformatics, Univ. Leipzig, Leipzig, Germany","institution_ids":["https://openalex.org/I926574661"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5089171871","display_name":"Jing Qin","orcid":"https://orcid.org/0000-0002-8302-0968"},"institutions":[{"id":"https://openalex.org/I4210091327","display_name":"Max Planck Institute for Mathematics in the Sciences","ror":"https://ror.org/00ez2he07","country_code":"DE","type":"facility","lineage":["https://openalex.org/I149899117","https://openalex.org/I4210091327"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Jing Qin","raw_affiliation_strings":["Mathematics in the Sciences, MPI, Leipzig, Germany"],"affiliations":[{"raw_affiliation_string":"Mathematics in the Sciences, MPI, Leipzig, Germany","institution_ids":["https://openalex.org/I4210091327"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5005332412","display_name":"Christian H\u00f6ner zu Siederdissen","orcid":"https://orcid.org/0000-0001-9517-5839"},"institutions":[{"id":"https://openalex.org/I129774422","display_name":"University of Vienna","ror":"https://ror.org/03prydq77","country_code":"AT","type":"education","lineage":["https://openalex.org/I129774422"]}],"countries":["AT"],"is_corresponding":false,"raw_author_name":"Christian H\u00f6ner zu Siederdissen","raw_affiliation_strings":["Dept. Theoretical Chemistry, Univ. Vienna, Wien, Austria"],"affiliations":[{"raw_affiliation_string":"Dept. Theoretical Chemistry, Univ. Vienna, Wien, Austria","institution_ids":["https://openalex.org/I129774422"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5003442431","display_name":"Fabian Amman","orcid":"https://orcid.org/0000-0002-8646-859X"},"institutions":[{"id":"https://openalex.org/I129774422","display_name":"University of Vienna","ror":"https://ror.org/03prydq77","country_code":"AT","type":"education","lineage":["https://openalex.org/I129774422"]}],"countries":["AT"],"is_corresponding":false,"raw_author_name":"Fabian Amman","raw_affiliation_strings":["Dept. Theoretical Chemistry, Univ. Vienna, Wien, Austria"],"affiliations":[{"raw_affiliation_string":"Dept. Theoretical Chemistry, Univ. Vienna, Wien, Austria","institution_ids":["https://openalex.org/I129774422"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5011771355","display_name":"Ivo L. Hofacker","orcid":"https://orcid.org/0000-0001-7132-0800"},"institutions":[{"id":"https://openalex.org/I129774422","display_name":"University of Vienna","ror":"https://ror.org/03prydq77","country_code":"AT","type":"education","lineage":["https://openalex.org/I129774422"]}],"countries":["AT"],"is_corresponding":false,"raw_author_name":"Ivo L. Hofacker","raw_affiliation_strings":["Dept. Theoretical Chemistry, Univ. Vienna, Wien, Austria","RTH, Univ. Copenhagen, Frederiksberg C, Denmark"],"affiliations":[{"raw_affiliation_string":"Dept. Theoretical Chemistry, Univ. Vienna, Wien, Austria","institution_ids":["https://openalex.org/I129774422"]},{"raw_affiliation_string":"RTH, Univ. Copenhagen, Frederiksberg C, Denmark","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5016104736","display_name":"Peter F. Stadler","orcid":"https://orcid.org/0000-0002-5016-5191"},"institutions":[{"id":"https://openalex.org/I129774422","display_name":"University of Vienna","ror":"https://ror.org/03prydq77","country_code":"AT","type":"education","lineage":["https://openalex.org/I129774422"]},{"id":"https://openalex.org/I1308548392","display_name":"Santa Fe Institute","ror":"https://ror.org/01arysc35","country_code":"US","type":"funder","lineage":["https://openalex.org/I1308548392"]},{"id":"https://openalex.org/I4210091327","display_name":"Max Planck Institute for Mathematics in the Sciences","ror":"https://ror.org/00ez2he07","country_code":"DE","type":"facility","lineage":["https://openalex.org/I149899117","https://openalex.org/I4210091327"]},{"id":"https://openalex.org/I926574661","display_name":"Leipzig University","ror":"https://ror.org/03s7gtk40","country_code":"DE","type":"education","lineage":["https://openalex.org/I926574661"]}],"countries":["AT","DE","US"],"is_corresponding":false,"raw_author_name":"Peter F. Stadler","raw_affiliation_strings":["Dept. Computer Science, and Interdisciplinary Center for Bioinformatics, Univ. Leipzig, Leipzig, Germany","RTH, Univ. Copenhagen, Frederiksberg C, Denmark","Cell Therapy and Immunology, FHI, Leipzig, Germany","Dept. Theoretical Chemistry, Univ. Vienna, Wien, Austria","Mathematics in the Sciences, MPI, Leipzig, Germany","Santa Fe Institute, Santa Fe, USA"],"affiliations":[{"raw_affiliation_string":"Dept. Computer Science, and Interdisciplinary Center for Bioinformatics, Univ. Leipzig, Leipzig, Germany","institution_ids":["https://openalex.org/I926574661"]},{"raw_affiliation_string":"RTH, Univ. Copenhagen, Frederiksberg C, Denmark","institution_ids":[]},{"raw_affiliation_string":"Cell Therapy and Immunology, FHI, Leipzig, Germany","institution_ids":[]},{"raw_affiliation_string":"Dept. Theoretical Chemistry, Univ. Vienna, Wien, Austria","institution_ids":["https://openalex.org/I129774422"]},{"raw_affiliation_string":"Mathematics in the Sciences, MPI, Leipzig, Germany","institution_ids":["https://openalex.org/I4210091327"]},{"raw_affiliation_string":"Santa Fe Institute, Santa Fe, USA","institution_ids":["https://openalex.org/I1308548392"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":8,"corresponding_author_ids":["https://openalex.org/A5086178125"],"corresponding_institution_ids":["https://openalex.org/I129774422"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":3.7703,"has_fulltext":false,"cited_by_count":15,"citation_normalized_percentile":{"value":0.93219173,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":null,"issue":null,"first_page":"49","last_page":"60"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10432","display_name":"DNA and Nucleic Acid Chemistry","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10207","display_name":"Advanced biosensing and bioanalysis techniques","score":0.9965000152587891,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/nucleic-acid-secondary-structure","display_name":"Nucleic acid secondary structure","score":0.7088154554367065},{"id":"https://openalex.org/keywords/rna","display_name":"RNA","score":0.6625148057937622},{"id":"https://openalex.org/keywords/folding","display_name":"Folding (DSP implementation)","score":0.6573696136474609},{"id":"https://openalex.org/keywords/g-quadruplex","display_name":"G-quadruplex","score":0.6547151803970337},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6130544543266296},{"id":"https://openalex.org/keywords/nucleic-acid","display_name":"Nucleic acid","score":0.5791033506393433},{"id":"https://openalex.org/keywords/nucleic-acid-structure","display_name":"Nucleic acid structure","score":0.5751588344573975},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.538453996181488},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5210391879081726},{"id":"https://openalex.org/keywords/dynamic-programming","display_name":"Dynamic programming","score":0.45918554067611694},{"id":"https://openalex.org/keywords/simple","display_name":"Simple (philosophy)","score":0.43559858202934265},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.3615100383758545},{"id":"https://openalex.org/keywords/dna","display_name":"DNA","score":0.3054789900779724},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.24594992399215698},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.20998939871788025},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.15567445755004883},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.07399818301200867}],"concepts":[{"id":"https://openalex.org/C85468374","wikidata":"https://www.wikidata.org/wiki/Q6589957","display_name":"Nucleic acid secondary structure","level":4,"score":0.7088154554367065},{"id":"https://openalex.org/C67705224","wikidata":"https://www.wikidata.org/wiki/Q11053","display_name":"RNA","level":3,"score":0.6625148057937622},{"id":"https://openalex.org/C2776545253","wikidata":"https://www.wikidata.org/wiki/Q5464292","display_name":"Folding (DSP implementation)","level":2,"score":0.6573696136474609},{"id":"https://openalex.org/C83762044","wikidata":"https://www.wikidata.org/wiki/Q411641","display_name":"G-quadruplex","level":3,"score":0.6547151803970337},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6130544543266296},{"id":"https://openalex.org/C24107716","wikidata":"https://www.wikidata.org/wiki/Q123619","display_name":"Nucleic acid","level":2,"score":0.5791033506393433},{"id":"https://openalex.org/C126142528","wikidata":"https://www.wikidata.org/wiki/Q3771876","display_name":"Nucleic acid structure","level":4,"score":0.5751588344573975},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.538453996181488},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5210391879081726},{"id":"https://openalex.org/C37404715","wikidata":"https://www.wikidata.org/wiki/Q380679","display_name":"Dynamic programming","level":2,"score":0.45918554067611694},{"id":"https://openalex.org/C2780586882","wikidata":"https://www.wikidata.org/wiki/Q7520643","display_name":"Simple (philosophy)","level":2,"score":0.43559858202934265},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.3615100383758545},{"id":"https://openalex.org/C552990157","wikidata":"https://www.wikidata.org/wiki/Q7430","display_name":"DNA","level":2,"score":0.3054789900779724},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.24594992399215698},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.20998939871788025},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.15567445755004883},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.07399818301200867},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C119599485","wikidata":"https://www.wikidata.org/wiki/Q43035","display_name":"Electrical engineering","level":1,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1007/978-3-642-31927-3_5","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-642-31927-3_5","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.587.4518","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.587.4518","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://www.bioinf.uni-leipzig.de/Publications/PREPRINTS/13-017.pdf","raw_type":"text"},{"id":"pmh:oai:edoc.mpg.de:645542","is_oa":false,"landing_page_url":"http://edoc.mpg.de/645542","pdf_url":null,"source":{"id":"https://openalex.org/S4406922265","display_name":"Max Planck Institute for Plasma Physics","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Advances in bioinformatics and computational biology : 7th Brazilian Symposium on Bioinformatics, BSB 2012, Campo Grande, Brazil, August 15-17, 2012 ; proceedings, 49-60 (2012)","raw_type":"InBook"}],"best_oa_location":null,"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/7","score":0.8700000047683716,"display_name":"Affordable and clean energy"}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":49,"referenced_works":["https://openalex.org/W186403072","https://openalex.org/W1970207762","https://openalex.org/W1974958116","https://openalex.org/W1975202253","https://openalex.org/W1977413761","https://openalex.org/W1977940795","https://openalex.org/W1984675364","https://openalex.org/W1988900456","https://openalex.org/W1993726540","https://openalex.org/W1998940503","https://openalex.org/W2004459276","https://openalex.org/W2004945910","https://openalex.org/W2009736453","https://openalex.org/W2015881490","https://openalex.org/W2025763720","https://openalex.org/W2026368455","https://openalex.org/W2027696068","https://openalex.org/W2032698727","https://openalex.org/W2036827141","https://openalex.org/W2041864455","https://openalex.org/W2042994965","https://openalex.org/W2045868610","https://openalex.org/W2047038417","https://openalex.org/W2047210598","https://openalex.org/W2048747633","https://openalex.org/W2052429686","https://openalex.org/W2066055007","https://openalex.org/W2074613554","https://openalex.org/W2076843089","https://openalex.org/W2086561953","https://openalex.org/W2096795400","https://openalex.org/W2099465074","https://openalex.org/W2102017611","https://openalex.org/W2111272410","https://openalex.org/W2119340328","https://openalex.org/W2119762097","https://openalex.org/W2122141896","https://openalex.org/W2122846880","https://openalex.org/W2130652515","https://openalex.org/W2130748131","https://openalex.org/W2139048065","https://openalex.org/W2151203827","https://openalex.org/W2155869782","https://openalex.org/W2164389045","https://openalex.org/W2168158291","https://openalex.org/W2169745877","https://openalex.org/W2171928459","https://openalex.org/W2333511642","https://openalex.org/W2340541605"],"related_works":["https://openalex.org/W1981373869","https://openalex.org/W2623595002","https://openalex.org/W342873049","https://openalex.org/W4386361828","https://openalex.org/W4236047093","https://openalex.org/W2410310292","https://openalex.org/W2109297587","https://openalex.org/W2123316289","https://openalex.org/W2061103938","https://openalex.org/W2941649605"],"abstract_inverted_index":null,"counts_by_year":[{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":1},{"year":2019,"cited_by_count":1},{"year":2017,"cited_by_count":1},{"year":2016,"cited_by_count":1},{"year":2015,"cited_by_count":1},{"year":2014,"cited_by_count":1},{"year":2013,"cited_by_count":4},{"year":2012,"cited_by_count":1}],"updated_date":"2026-04-23T09:07:50.710637","created_date":"2025-10-10T00:00:00"}