{"id":"https://openalex.org/W2114111252","doi":"https://doi.org/10.1007/978-3-642-31927-3_13","title":"Design and Implementation of ProteinWorldDB","display_name":"Design and Implementation of ProteinWorldDB","publication_year":2012,"publication_date":"2012-01-01","ids":{"openalex":"https://openalex.org/W2114111252","doi":"https://doi.org/10.1007/978-3-642-31927-3_13","mag":"2114111252"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-642-31927-3_13","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-642-31927-3_13","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5085416987","display_name":"S\u00e9rgio Lifschitz","orcid":"https://orcid.org/0000-0003-3073-3734"},"institutions":[{"id":"https://openalex.org/I2699952","display_name":"Pontifical Catholic University of Rio de Janeiro","ror":"https://ror.org/01dg47b60","country_code":"BR","type":"education","lineage":["https://openalex.org/I2699952"]}],"countries":["BR"],"is_corresponding":true,"raw_author_name":"S\u00e9rgio Lifschitz","raw_affiliation_strings":["Departamento de Inform\u00e1tica, PUC-Rio, Rio de Janeiro, RJ, Brazil"],"affiliations":[{"raw_affiliation_string":"Departamento de Inform\u00e1tica, PUC-Rio, Rio de Janeiro, RJ, Brazil","institution_ids":["https://openalex.org/I2699952"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5002249616","display_name":"Carlos Juliano M. Viana","orcid":null},"institutions":[{"id":"https://openalex.org/I2699952","display_name":"Pontifical Catholic University of Rio de Janeiro","ror":"https://ror.org/01dg47b60","country_code":"BR","type":"education","lineage":["https://openalex.org/I2699952"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Carlos Juliano M. Viana","raw_affiliation_strings":["Departamento de Inform\u00e1tica, PUC-Rio, Rio de Janeiro, RJ, Brazil"],"affiliations":[{"raw_affiliation_string":"Departamento de Inform\u00e1tica, PUC-Rio, Rio de Janeiro, RJ, Brazil","institution_ids":["https://openalex.org/I2699952"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5047565478","display_name":"Cristian Trist\u00e3o","orcid":"https://orcid.org/0000-0002-8164-9965"},"institutions":[{"id":"https://openalex.org/I2699952","display_name":"Pontifical Catholic University of Rio de Janeiro","ror":"https://ror.org/01dg47b60","country_code":"BR","type":"education","lineage":["https://openalex.org/I2699952"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Cristian Trist\u00e3o","raw_affiliation_strings":["Departamento de Inform\u00e1tica, PUC-Rio, Rio de Janeiro, RJ, Brazil"],"affiliations":[{"raw_affiliation_string":"Departamento de Inform\u00e1tica, PUC-Rio, Rio de Janeiro, RJ, Brazil","institution_ids":["https://openalex.org/I2699952"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5037254032","display_name":"Marcos Catanho","orcid":"https://orcid.org/0000-0002-9184-4158"},"institutions":[{"id":"https://openalex.org/I52325","display_name":"Funda\u00e7\u00e3o Oswaldo Cruz","ror":"https://ror.org/04jhswv08","country_code":"BR","type":"facility","lineage":["https://openalex.org/I52325"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Marcos Catanho","raw_affiliation_strings":["Laborat\u00f3rio de Gen\u00f4mica Funcional e Bioinform\u00e1tica, Instituto Oswaldo Cruz, Rio de Janeiro, RJ, Brazil"],"affiliations":[{"raw_affiliation_string":"Laborat\u00f3rio de Gen\u00f4mica Funcional e Bioinform\u00e1tica, Instituto Oswaldo Cruz, Rio de Janeiro, RJ, Brazil","institution_ids":["https://openalex.org/I52325"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5002952445","display_name":"Wim Degrave","orcid":null},"institutions":[{"id":"https://openalex.org/I52325","display_name":"Funda\u00e7\u00e3o Oswaldo Cruz","ror":"https://ror.org/04jhswv08","country_code":"BR","type":"facility","lineage":["https://openalex.org/I52325"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Wim M. Degrave","raw_affiliation_strings":["Laborat\u00f3rio de Gen\u00f4mica Funcional e Bioinform\u00e1tica, Instituto Oswaldo Cruz, Rio de Janeiro, RJ, Brazil"],"affiliations":[{"raw_affiliation_string":"Laborat\u00f3rio de Gen\u00f4mica Funcional e Bioinform\u00e1tica, Instituto Oswaldo Cruz, Rio de Janeiro, RJ, Brazil","institution_ids":["https://openalex.org/I52325"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103073124","display_name":"Ant\u00f4nio Bas\u00edlio de Miranda","orcid":"https://orcid.org/0000-0002-4977-7350"},"institutions":[{"id":"https://openalex.org/I52325","display_name":"Funda\u00e7\u00e3o Oswaldo Cruz","ror":"https://ror.org/04jhswv08","country_code":"BR","type":"facility","lineage":["https://openalex.org/I52325"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Antonio Bas\u00edlio de Miranda","raw_affiliation_strings":["Laborat\u00f3rio de Biologia Computacional e Sistemas, Instituto Oswaldo Cruz, Rio de Janeiro, RJ, Brazil"],"affiliations":[{"raw_affiliation_string":"Laborat\u00f3rio de Biologia Computacional e Sistemas, Instituto Oswaldo Cruz, Rio de Janeiro, RJ, Brazil","institution_ids":["https://openalex.org/I52325"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5036211758","display_name":"M\u00e1rcia Bezerra","orcid":null},"institutions":[{"id":"https://openalex.org/I52325","display_name":"Funda\u00e7\u00e3o Oswaldo Cruz","ror":"https://ror.org/04jhswv08","country_code":"BR","type":"facility","lineage":["https://openalex.org/I52325"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"M\u00e1rcia Bezerra","raw_affiliation_strings":["Laborat\u00f3rio de Biologia Computacional e Sistemas, Instituto Oswaldo Cruz, Rio de Janeiro, RJ, Brazil"],"affiliations":[{"raw_affiliation_string":"Laborat\u00f3rio de Biologia Computacional e Sistemas, Instituto Oswaldo Cruz, Rio de Janeiro, RJ, Brazil","institution_ids":["https://openalex.org/I52325"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5082108901","display_name":"Thomas Otto","orcid":"https://orcid.org/0000-0002-6182-8659"},"institutions":[{"id":"https://openalex.org/I2802476451","display_name":"Wellcome Sanger Institute","ror":"https://ror.org/05cy4wa09","country_code":"GB","type":"nonprofit","lineage":["https://openalex.org/I2802476451","https://openalex.org/I87048295"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Thomas D. Otto","raw_affiliation_strings":["Wellcome Trust Sanger Institute, Hinxton, United Kingdom"],"affiliations":[{"raw_affiliation_string":"Wellcome Trust Sanger Institute, Hinxton, United Kingdom","institution_ids":["https://openalex.org/I2802476451"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":8,"corresponding_author_ids":["https://openalex.org/A5085416987"],"corresponding_institution_ids":["https://openalex.org/I2699952"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.17836542,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"144","last_page":"155"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10538","display_name":"Data Mining Algorithms and Applications","score":0.9901000261306763,"subfield":{"id":"https://openalex.org/subfields/1710","display_name":"Information Systems"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10519","display_name":"Advanced Proteomics Techniques and Applications","score":0.9850999712944031,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8335696458816528},{"id":"https://openalex.org/keywords/refseq","display_name":"RefSeq","score":0.6435356140136719},{"id":"https://openalex.org/keywords/database-schema","display_name":"Database schema","score":0.5353477597236633},{"id":"https://openalex.org/keywords/schema","display_name":"Schema (genetic algorithms)","score":0.5221827030181885},{"id":"https://openalex.org/keywords/relational-database","display_name":"Relational database","score":0.5046101808547974},{"id":"https://openalex.org/keywords/database-theory","display_name":"Database theory","score":0.46292659640312195},{"id":"https://openalex.org/keywords/grid","display_name":"Grid","score":0.4607703387737274},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.44803592562675476},{"id":"https://openalex.org/keywords/database-design","display_name":"Database design","score":0.43777209520339966},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.4275302290916443},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.40863046050071716},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.3615397810935974},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.32506072521209717},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.20717337727546692},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.12262675166130066}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8335696458816528},{"id":"https://openalex.org/C151810110","wikidata":"https://www.wikidata.org/wiki/Q7307074","display_name":"RefSeq","level":4,"score":0.6435356140136719},{"id":"https://openalex.org/C30775581","wikidata":"https://www.wikidata.org/wiki/Q632285","display_name":"Database schema","level":3,"score":0.5353477597236633},{"id":"https://openalex.org/C52146309","wikidata":"https://www.wikidata.org/wiki/Q7431116","display_name":"Schema (genetic algorithms)","level":2,"score":0.5221827030181885},{"id":"https://openalex.org/C5655090","wikidata":"https://www.wikidata.org/wiki/Q192588","display_name":"Relational database","level":2,"score":0.5046101808547974},{"id":"https://openalex.org/C12439846","wikidata":"https://www.wikidata.org/wiki/Q4809258","display_name":"Database theory","level":3,"score":0.46292659640312195},{"id":"https://openalex.org/C187691185","wikidata":"https://www.wikidata.org/wiki/Q2020720","display_name":"Grid","level":2,"score":0.4607703387737274},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.44803592562675476},{"id":"https://openalex.org/C148840519","wikidata":"https://www.wikidata.org/wiki/Q1049878","display_name":"Database design","level":2,"score":0.43777209520339966},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.4275302290916443},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.40863046050071716},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.3615397810935974},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.32506072521209717},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.20717337727546692},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.12262675166130066},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.0},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C2524010","wikidata":"https://www.wikidata.org/wiki/Q8087","display_name":"Geometry","level":1,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/978-3-642-31927-3_13","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-642-31927-3_13","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":14,"referenced_works":["https://openalex.org/W1592614241","https://openalex.org/W1599784097","https://openalex.org/W1748990669","https://openalex.org/W1986703369","https://openalex.org/W2013623410","https://openalex.org/W2054698853","https://openalex.org/W2089499735","https://openalex.org/W2106040820","https://openalex.org/W2111197836","https://openalex.org/W2141885858","https://openalex.org/W2159482845","https://openalex.org/W2168546455","https://openalex.org/W2282045063","https://openalex.org/W2527113450"],"related_works":["https://openalex.org/W2105333333","https://openalex.org/W2153455914","https://openalex.org/W1502610062","https://openalex.org/W1501673548","https://openalex.org/W2079588361","https://openalex.org/W2762065037","https://openalex.org/W2512945146","https://openalex.org/W2460926837","https://openalex.org/W2000469556","https://openalex.org/W2031508292"],"abstract_inverted_index":null,"counts_by_year":[],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
