{"id":"https://openalex.org/W36021107","doi":"https://doi.org/10.1007/978-3-642-31040-9_3","title":"Finding Cross Genome Patterns in Annotation Graphs","display_name":"Finding Cross Genome Patterns in Annotation Graphs","publication_year":2012,"publication_date":"2012-01-01","ids":{"openalex":"https://openalex.org/W36021107","doi":"https://doi.org/10.1007/978-3-642-31040-9_3","mag":"36021107"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-642-31040-9_3","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-642-31040-9_3","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5044381648","display_name":"Joseph Benik","orcid":null},"institutions":[{"id":"https://openalex.org/I66946132","display_name":"University of Maryland, College Park","ror":"https://ror.org/047s2c258","country_code":"US","type":"education","lineage":["https://openalex.org/I66946132"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Joseph Benik","raw_affiliation_strings":["University of Maryland, USA"],"affiliations":[{"raw_affiliation_string":"University of Maryland, USA","institution_ids":["https://openalex.org/I66946132"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5024552660","display_name":"Caren Chang","orcid":"https://orcid.org/0000-0003-0384-5888"},"institutions":[{"id":"https://openalex.org/I66946132","display_name":"University of Maryland, College Park","ror":"https://ror.org/047s2c258","country_code":"US","type":"education","lineage":["https://openalex.org/I66946132"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Caren Chang","raw_affiliation_strings":["University of Maryland, USA"],"affiliations":[{"raw_affiliation_string":"University of Maryland, USA","institution_ids":["https://openalex.org/I66946132"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5054150982","display_name":"Louiqa Raschid","orcid":"https://orcid.org/0000-0002-0630-6049"},"institutions":[{"id":"https://openalex.org/I66946132","display_name":"University of Maryland, College Park","ror":"https://ror.org/047s2c258","country_code":"US","type":"education","lineage":["https://openalex.org/I66946132"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Louiqa Raschid","raw_affiliation_strings":["University of Maryland, USA"],"affiliations":[{"raw_affiliation_string":"University of Maryland, USA","institution_ids":["https://openalex.org/I66946132"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5055433807","display_name":"Mar\u00eda-Esther Vidal","orcid":"https://orcid.org/0000-0003-1160-8727"},"institutions":[{"id":"https://openalex.org/I629287","display_name":"Sim\u00f3n Bol\u00edvar University","ror":"https://ror.org/01ak5cj98","country_code":"VE","type":"education","lineage":["https://openalex.org/I629287"]}],"countries":["VE"],"is_corresponding":false,"raw_author_name":"Maria-Esther Vidal","raw_affiliation_strings":["Universidad Sim\u00f3n Bol\u00edvar, Venezuela"],"affiliations":[{"raw_affiliation_string":"Universidad Sim\u00f3n Bol\u00edvar, Venezuela","institution_ids":["https://openalex.org/I629287"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5069520441","display_name":"Guillermo Palma","orcid":"https://orcid.org/0000-0002-8111-2439"},"institutions":[{"id":"https://openalex.org/I629287","display_name":"Sim\u00f3n Bol\u00edvar University","ror":"https://ror.org/01ak5cj98","country_code":"VE","type":"education","lineage":["https://openalex.org/I629287"]}],"countries":["VE"],"is_corresponding":false,"raw_author_name":"Guillermo Palma","raw_affiliation_strings":["Universidad Sim\u00f3n Bol\u00edvar, Venezuela"],"affiliations":[{"raw_affiliation_string":"Universidad Sim\u00f3n Bol\u00edvar, Venezuela","institution_ids":["https://openalex.org/I629287"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5015557906","display_name":"Andreas Thor","orcid":"https://orcid.org/0000-0003-2575-2893"},"institutions":[{"id":"https://openalex.org/I926574661","display_name":"Leipzig University","ror":"https://ror.org/03s7gtk40","country_code":"DE","type":"education","lineage":["https://openalex.org/I926574661"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Andreas Thor","raw_affiliation_strings":["University of Leipzig, Germany"],"affiliations":[{"raw_affiliation_string":"University of Leipzig, Germany","institution_ids":["https://openalex.org/I926574661"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5044381648"],"corresponding_institution_ids":["https://openalex.org/I66946132"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":5.927,"has_fulltext":false,"cited_by_count":17,"citation_normalized_percentile":{"value":0.96360008,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":98},"biblio":{"volume":null,"issue":null,"first_page":"21","last_page":"36"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9983000159263611,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9983000159263611,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9961000084877014,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9919000267982483,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.7639179229736328},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7151269912719727},{"id":"https://openalex.org/keywords/automatic-summarization","display_name":"Automatic summarization","score":0.6845980882644653},{"id":"https://openalex.org/keywords/vocabulary","display_name":"Vocabulary","score":0.538442850112915},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.5226656794548035},{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.49267393350601196},{"id":"https://openalex.org/keywords/graph","display_name":"Graph","score":0.4686312675476074},{"id":"https://openalex.org/keywords/genome-project","display_name":"Genome project","score":0.444613516330719},{"id":"https://openalex.org/keywords/encode","display_name":"ENCODE","score":0.4283459782600403},{"id":"https://openalex.org/keywords/gene-annotation","display_name":"Gene Annotation","score":0.42758017778396606},{"id":"https://openalex.org/keywords/knowledge-extraction","display_name":"Knowledge extraction","score":0.4268835783004761},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.41537100076675415},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.30320465564727783},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.2557007074356079},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.16386952996253967},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.1532665193080902}],"concepts":[{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.7639179229736328},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7151269912719727},{"id":"https://openalex.org/C170858558","wikidata":"https://www.wikidata.org/wiki/Q1394144","display_name":"Automatic summarization","level":2,"score":0.6845980882644653},{"id":"https://openalex.org/C2777601683","wikidata":"https://www.wikidata.org/wiki/Q6499736","display_name":"Vocabulary","level":2,"score":0.538442850112915},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.5226656794548035},{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.49267393350601196},{"id":"https://openalex.org/C132525143","wikidata":"https://www.wikidata.org/wiki/Q141488","display_name":"Graph","level":2,"score":0.4686312675476074},{"id":"https://openalex.org/C89566754","wikidata":"https://www.wikidata.org/wiki/Q2273828","display_name":"Genome project","level":4,"score":0.444613516330719},{"id":"https://openalex.org/C66746571","wikidata":"https://www.wikidata.org/wiki/Q1134833","display_name":"ENCODE","level":3,"score":0.4283459782600403},{"id":"https://openalex.org/C2908923196","wikidata":"https://www.wikidata.org/wiki/Q5205742","display_name":"Gene Annotation","level":4,"score":0.42758017778396606},{"id":"https://openalex.org/C120567893","wikidata":"https://www.wikidata.org/wiki/Q1582085","display_name":"Knowledge extraction","level":2,"score":0.4268835783004761},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.41537100076675415},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.30320465564727783},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.2557007074356079},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.16386952996253967},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.1532665193080902},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1007/978-3-642-31040-9_3","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-642-31040-9_3","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.649.6394","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.649.6394","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://dbs.uni-leipzig.de/file/PAnGDILS2012.pdf","raw_type":"text"}],"best_oa_location":null,"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/12","display_name":"Responsible consumption and production","score":0.47999998927116394}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":26,"referenced_works":["https://openalex.org/W116230465","https://openalex.org/W183656749","https://openalex.org/W839878123","https://openalex.org/W1500512125","https://openalex.org/W1502940150","https://openalex.org/W1535144194","https://openalex.org/W1539889048","https://openalex.org/W1568075819","https://openalex.org/W1589421353","https://openalex.org/W1647729745","https://openalex.org/W1963838724","https://openalex.org/W1966895539","https://openalex.org/W2007038646","https://openalex.org/W2084168100","https://openalex.org/W2103017472","https://openalex.org/W2108781142","https://openalex.org/W2116027790","https://openalex.org/W2117805756","https://openalex.org/W2122831287","https://openalex.org/W2125690626","https://openalex.org/W2128049108","https://openalex.org/W2148048450","https://openalex.org/W2149545752","https://openalex.org/W2493241760","https://openalex.org/W2604823638","https://openalex.org/W2953332543"],"related_works":["https://openalex.org/W2395068850","https://openalex.org/W2130395351","https://openalex.org/W3209070317","https://openalex.org/W2126475719","https://openalex.org/W2187917240","https://openalex.org/W2092969717","https://openalex.org/W2069449951","https://openalex.org/W2012609840","https://openalex.org/W2366650996","https://openalex.org/W2784408333"],"abstract_inverted_index":null,"counts_by_year":[{"year":2018,"cited_by_count":2},{"year":2017,"cited_by_count":2},{"year":2016,"cited_by_count":2},{"year":2015,"cited_by_count":5},{"year":2014,"cited_by_count":3},{"year":2013,"cited_by_count":2},{"year":2012,"cited_by_count":1}],"updated_date":"2026-04-04T16:13:02.066488","created_date":"2025-10-10T00:00:00"}
