{"id":"https://openalex.org/W2108967790","doi":"https://doi.org/10.1007/978-3-642-28267-6_20","title":"Examining Protein Folding Process Simulation and Searching for Common Structure Motifs in a Protein Family as Experiments in the GridSpace2 Virtual Laboratory","display_name":"Examining Protein Folding Process Simulation and Searching for Common Structure Motifs in a Protein Family as Experiments in the GridSpace2 Virtual Laboratory","publication_year":2012,"publication_date":"2012-01-01","ids":{"openalex":"https://openalex.org/W2108967790","doi":"https://doi.org/10.1007/978-3-642-28267-6_20","mag":"2108967790"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-642-28267-6_20","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-642-28267-6_20","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5045987075","display_name":"Tomasz Jadczyk","orcid":"https://orcid.org/0000-0002-7955-9100"},"institutions":[{"id":"https://openalex.org/I686019","display_name":"AGH University of Krakow","ror":"https://ror.org/00bas1c41","country_code":"PL","type":"education","lineage":["https://openalex.org/I686019"]}],"countries":["PL"],"is_corresponding":true,"raw_author_name":"Tomasz Jadczyk","raw_affiliation_strings":["ACC Cyfronet AGH, AGH University of Science and Technology, Krak\u00f3w, Poland"],"affiliations":[{"raw_affiliation_string":"ACC Cyfronet AGH, AGH University of Science and Technology, Krak\u00f3w, Poland","institution_ids":["https://openalex.org/I686019"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5107194750","display_name":"M. Malawski","orcid":"https://orcid.org/0000-0001-6005-0243"},"institutions":[{"id":"https://openalex.org/I686019","display_name":"AGH University of Krakow","ror":"https://ror.org/00bas1c41","country_code":"PL","type":"education","lineage":["https://openalex.org/I686019"]}],"countries":["PL"],"is_corresponding":false,"raw_author_name":"Maciej Malawski","raw_affiliation_strings":["Department of Computer Science, AGH University of Science and Technology, Krak\u00f3w, Poland"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, AGH University of Science and Technology, Krak\u00f3w, Poland","institution_ids":["https://openalex.org/I686019"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5004326594","display_name":"Marian Bubak","orcid":"https://orcid.org/0000-0001-6083-0549"},"institutions":[{"id":"https://openalex.org/I686019","display_name":"AGH University of Krakow","ror":"https://ror.org/00bas1c41","country_code":"PL","type":"education","lineage":["https://openalex.org/I686019"]},{"id":"https://openalex.org/I887064364","display_name":"University of Amsterdam","ror":"https://ror.org/04dkp9463","country_code":"NL","type":"education","lineage":["https://openalex.org/I887064364"]}],"countries":["NL","PL"],"is_corresponding":false,"raw_author_name":"Marian Bubak","raw_affiliation_strings":["Department of Computer Science, AGH University of Science and Technology, Krak\u00f3w, Poland","Informatics Institute, University of Amsterdam, The Netherlands"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, AGH University of Science and Technology, Krak\u00f3w, Poland","institution_ids":["https://openalex.org/I686019"]},{"raw_affiliation_string":"Informatics Institute, University of Amsterdam, The Netherlands","institution_ids":["https://openalex.org/I887064364"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5087239926","display_name":"Irena Roterman","orcid":"https://orcid.org/0000-0003-3652-9099"},"institutions":[{"id":"https://openalex.org/I126596746","display_name":"Jagiellonian University","ror":"https://ror.org/03bqmcz70","country_code":"PL","type":"education","lineage":["https://openalex.org/I126596746"]}],"countries":["PL"],"is_corresponding":false,"raw_author_name":"Irena Roterman","raw_affiliation_strings":["Medical College, Department of Bioinformatics and Telemedicine, Jagiellonian University, Krak\u00f3w, Poland"],"affiliations":[{"raw_affiliation_string":"Medical College, Department of Bioinformatics and Telemedicine, Jagiellonian University, Krak\u00f3w, Poland","institution_ids":["https://openalex.org/I126596746"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5045987075"],"corresponding_institution_ids":["https://openalex.org/I686019"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":1.2076,"has_fulltext":false,"cited_by_count":3,"citation_normalized_percentile":{"value":0.80245151,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":null,"issue":null,"first_page":"252","last_page":"264"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10715","display_name":"Distributed and Parallel Computing Systems","score":0.9973999857902527,"subfield":{"id":"https://openalex.org/subfields/1705","display_name":"Computer Networks and Communications"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10715","display_name":"Distributed and Parallel Computing Systems","score":0.9973999857902527,"subfield":{"id":"https://openalex.org/subfields/1705","display_name":"Computer Networks and Communications"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9932000041007996,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9918000102043152,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7210977077484131},{"id":"https://openalex.org/keywords/workbench","display_name":"Workbench","score":0.6492794156074524},{"id":"https://openalex.org/keywords/correctness","display_name":"Correctness","score":0.5768860578536987},{"id":"https://openalex.org/keywords/folding","display_name":"Folding (DSP implementation)","score":0.471181184053421},{"id":"https://openalex.org/keywords/grid","display_name":"Grid","score":0.44304192066192627},{"id":"https://openalex.org/keywords/in-silico","display_name":"In silico","score":0.4404156804084778},{"id":"https://openalex.org/keywords/protein-folding","display_name":"Protein folding","score":0.4333671033382416},{"id":"https://openalex.org/keywords/process","display_name":"Process (computing)","score":0.4280800223350525},{"id":"https://openalex.org/keywords/computational-science","display_name":"Computational science","score":0.39970454573631287},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.23532801866531372},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.22955498099327087},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.1979227364063263},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.16392767429351807},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.11008423566818237},{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.09812313318252563},{"id":"https://openalex.org/keywords/mechanical-engineering","display_name":"Mechanical engineering","score":0.09798011183738708},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.08533602952957153}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7210977077484131},{"id":"https://openalex.org/C2779145975","wikidata":"https://www.wikidata.org/wiki/Q347690","display_name":"Workbench","level":3,"score":0.6492794156074524},{"id":"https://openalex.org/C55439883","wikidata":"https://www.wikidata.org/wiki/Q360812","display_name":"Correctness","level":2,"score":0.5768860578536987},{"id":"https://openalex.org/C2776545253","wikidata":"https://www.wikidata.org/wiki/Q5464292","display_name":"Folding (DSP implementation)","level":2,"score":0.471181184053421},{"id":"https://openalex.org/C187691185","wikidata":"https://www.wikidata.org/wiki/Q2020720","display_name":"Grid","level":2,"score":0.44304192066192627},{"id":"https://openalex.org/C2775905019","wikidata":"https://www.wikidata.org/wiki/Q192572","display_name":"In silico","level":3,"score":0.4404156804084778},{"id":"https://openalex.org/C204328495","wikidata":"https://www.wikidata.org/wiki/Q847556","display_name":"Protein folding","level":2,"score":0.4333671033382416},{"id":"https://openalex.org/C98045186","wikidata":"https://www.wikidata.org/wiki/Q205663","display_name":"Process (computing)","level":2,"score":0.4280800223350525},{"id":"https://openalex.org/C459310","wikidata":"https://www.wikidata.org/wiki/Q117801","display_name":"Computational science","level":1,"score":0.39970454573631287},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.23532801866531372},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.22955498099327087},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.1979227364063263},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.16392767429351807},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.11008423566818237},{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.09812313318252563},{"id":"https://openalex.org/C78519656","wikidata":"https://www.wikidata.org/wiki/Q101333","display_name":"Mechanical engineering","level":1,"score":0.09798011183738708},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.08533602952957153},{"id":"https://openalex.org/C2524010","wikidata":"https://www.wikidata.org/wiki/Q8087","display_name":"Geometry","level":1,"score":0.0},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/978-3-642-28267-6_20","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-642-28267-6_20","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":21,"referenced_works":["https://openalex.org/W108731745","https://openalex.org/W157808733","https://openalex.org/W184712960","https://openalex.org/W350746363","https://openalex.org/W1558326120","https://openalex.org/W1885927962","https://openalex.org/W1973687802","https://openalex.org/W1981532526","https://openalex.org/W1996964642","https://openalex.org/W2000730583","https://openalex.org/W2043628867","https://openalex.org/W2101743409","https://openalex.org/W2114441129","https://openalex.org/W2126016150","https://openalex.org/W2136086640","https://openalex.org/W2137015675","https://openalex.org/W2137653635","https://openalex.org/W2156954132","https://openalex.org/W2342142471","https://openalex.org/W2489370373","https://openalex.org/W4255988860"],"related_works":["https://openalex.org/W2346923171","https://openalex.org/W3142909663","https://openalex.org/W2260493136","https://openalex.org/W2113188411","https://openalex.org/W2976965029","https://openalex.org/W2382178265","https://openalex.org/W2055827177","https://openalex.org/W2072666835","https://openalex.org/W4248706500","https://openalex.org/W2939859775"],"abstract_inverted_index":null,"counts_by_year":[{"year":2023,"cited_by_count":1},{"year":2014,"cited_by_count":1},{"year":2012,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
