{"id":"https://openalex.org/W141675256","doi":"https://doi.org/10.1007/978-3-642-28062-7_3","title":"An Ontology and a REST API for Sequence Based Microbial Typing Data","display_name":"An Ontology and a REST API for Sequence Based Microbial Typing Data","publication_year":2012,"publication_date":"2012-01-01","ids":{"openalex":"https://openalex.org/W141675256","doi":"https://doi.org/10.1007/978-3-642-28062-7_3","mag":"141675256"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-642-28062-7_3","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-642-28062-7_3","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"http://hdl.handle.net/10400.21/13333","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5036502424","display_name":"Jo\u00e3o Almeida","orcid":null},"institutions":[],"countries":[],"is_corresponding":true,"raw_author_name":"Jo\u00e3o Almeida","raw_affiliation_strings":["DEETC, ISEL, Poly Inst. of Lisbon, Portugal"],"affiliations":[{"raw_affiliation_string":"DEETC, ISEL, Poly Inst. of Lisbon, Portugal","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5069460925","display_name":"Jo\u00e3o Tiple","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Jo\u00e3o Tiple","raw_affiliation_strings":["DEETC, ISEL, Poly Inst. of Lisbon, Portugal"],"affiliations":[{"raw_affiliation_string":"DEETC, ISEL, Poly Inst. of Lisbon, Portugal","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5082344930","display_name":"M\u00e1rio Ramirez","orcid":"https://orcid.org/0000-0002-4084-6233"},"institutions":[{"id":"https://openalex.org/I141596103","display_name":"University of Lisbon","ror":"https://ror.org/01c27hj86","country_code":"PT","type":"education","lineage":["https://openalex.org/I141596103"]}],"countries":["PT"],"is_corresponding":false,"raw_author_name":"M\u00e1rio Ramirez","raw_affiliation_strings":["IM / IMM, FM, Univ. of Lisbon, Portugal"],"affiliations":[{"raw_affiliation_string":"IM / IMM, FM, Univ. of Lisbon, Portugal","institution_ids":["https://openalex.org/I141596103"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5079007538","display_name":"Jos\u00e9 Melo\u2010Cristino","orcid":"https://orcid.org/0000-0001-8643-1722"},"institutions":[{"id":"https://openalex.org/I141596103","display_name":"University of Lisbon","ror":"https://ror.org/01c27hj86","country_code":"PT","type":"education","lineage":["https://openalex.org/I141596103"]}],"countries":["PT"],"is_corresponding":false,"raw_author_name":"Jos\u00e9 Melo-Cristino","raw_affiliation_strings":["IM / IMM, FM, Univ. of Lisbon, Portugal"],"affiliations":[{"raw_affiliation_string":"IM / IMM, FM, Univ. of Lisbon, Portugal","institution_ids":["https://openalex.org/I141596103"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5041077284","display_name":"C\u00e1tia Vaz","orcid":"https://orcid.org/0000-0001-6074-3074"},"institutions":[{"id":"https://openalex.org/I121345201","display_name":"Instituto de Engenharia de Sistemas e Computadores Investiga\u00e7\u00e3o e Desenvolvimento","ror":"https://ror.org/04mqy3p58","country_code":"PT","type":"nonprofit","lineage":["https://openalex.org/I121345201","https://openalex.org/I4210125590"]}],"countries":["PT"],"is_corresponding":false,"raw_author_name":"C\u00e1tia Vaz","raw_affiliation_strings":["DEETC, ISEL, Poly Inst. of Lisbon, Portugal","INESC-ID Lisbon, Portugal"],"affiliations":[{"raw_affiliation_string":"DEETC, ISEL, Poly Inst. of Lisbon, Portugal","institution_ids":[]},{"raw_affiliation_string":"INESC-ID Lisbon, Portugal","institution_ids":["https://openalex.org/I121345201"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110540557","display_name":"Alexandre P. Francisco","orcid":"https://orcid.org/0000-0003-4852-1641"},"institutions":[{"id":"https://openalex.org/I4210154254","display_name":"Instituto Superior de Tecnologias Avan\u00e7adas","ror":"https://ror.org/04hzbg791","country_code":"PT","type":"education","lineage":["https://openalex.org/I4210154254"]},{"id":"https://openalex.org/I121345201","display_name":"Instituto de Engenharia de Sistemas e Computadores Investiga\u00e7\u00e3o e Desenvolvimento","ror":"https://ror.org/04mqy3p58","country_code":"PT","type":"nonprofit","lineage":["https://openalex.org/I121345201","https://openalex.org/I4210125590"]},{"id":"https://openalex.org/I4210116613","display_name":"National Statistical Institute of Portugal","ror":"https://ror.org/0298rr784","country_code":"PT","type":"education","lineage":["https://openalex.org/I4210116613"]}],"countries":["PT"],"is_corresponding":false,"raw_author_name":"Alexandre P. Francisco","raw_affiliation_strings":["CSE Dept., IST, Tech. Univ. of Lisbon, Portugal","INESC-ID Lisbon, Portugal"],"affiliations":[{"raw_affiliation_string":"CSE Dept., IST, Tech. Univ. of Lisbon, Portugal","institution_ids":["https://openalex.org/I4210154254","https://openalex.org/I4210116613"]},{"raw_affiliation_string":"INESC-ID Lisbon, Portugal","institution_ids":["https://openalex.org/I121345201"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5057086640","display_name":"Jo\u00e3o Andr\u00e9 Carri\u00e7o","orcid":"https://orcid.org/0000-0002-5274-2722"},"institutions":[{"id":"https://openalex.org/I141596103","display_name":"University of Lisbon","ror":"https://ror.org/01c27hj86","country_code":"PT","type":"education","lineage":["https://openalex.org/I141596103"]}],"countries":["PT"],"is_corresponding":false,"raw_author_name":"Jo\u00e3o A. Carri\u00e7o","raw_affiliation_strings":["IM / IMM, FM, Univ. of Lisbon, Portugal"],"affiliations":[{"raw_affiliation_string":"IM / IMM, FM, Univ. of Lisbon, Portugal","institution_ids":["https://openalex.org/I141596103"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5036502424"],"corresponding_institution_ids":[],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":1.0776,"has_fulltext":false,"cited_by_count":3,"citation_normalized_percentile":{"value":0.79921558,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":null,"issue":null,"first_page":"21","last_page":"28"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10066","display_name":"Gut microbiota and health","score":0.9937999844551086,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9927999973297119,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/typing","display_name":"Typing","score":0.745871365070343},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7077649831771851},{"id":"https://openalex.org/keywords/ontology","display_name":"Ontology","score":0.5149324536323547},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.4476074278354645},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.3274760842323303},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.17223167419433594},{"id":"https://openalex.org/keywords/ecology","display_name":"Ecology","score":0.0635063648223877}],"concepts":[{"id":"https://openalex.org/C2781209916","wikidata":"https://www.wikidata.org/wiki/Q3215756","display_name":"Typing","level":2,"score":0.745871365070343},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7077649831771851},{"id":"https://openalex.org/C25810664","wikidata":"https://www.wikidata.org/wiki/Q44325","display_name":"Ontology","level":2,"score":0.5149324536323547},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.4476074278354645},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.3274760842323303},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.17223167419433594},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.0635063648223877},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0},{"id":"https://openalex.org/C28490314","wikidata":"https://www.wikidata.org/wiki/Q189436","display_name":"Speech recognition","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1007/978-3-642-28062-7_3","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-642-28062-7_3","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},{"id":"pmh:oai:repositorio.ipl.pt:10400.21/13333","is_oa":true,"landing_page_url":"http://hdl.handle.net/10400.21/13333","pdf_url":null,"source":{"id":"https://openalex.org/S4306400762","display_name":"Reposit\u00f3rio Cient\u00edfico do Instituto Polit\u00e9cnico de Lisboa (Instituto Polit\u00e9cnico de Lisboa)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I203847022","host_organization_name":"Instituto Polit\u00e9cnico de Lisboa","host_organization_lineage":["https://openalex.org/I203847022"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"conference object"}],"best_oa_location":{"id":"pmh:oai:repositorio.ipl.pt:10400.21/13333","is_oa":true,"landing_page_url":"http://hdl.handle.net/10400.21/13333","pdf_url":null,"source":{"id":"https://openalex.org/S4306400762","display_name":"Reposit\u00f3rio Cient\u00edfico do Instituto Polit\u00e9cnico de Lisboa (Instituto Polit\u00e9cnico de Lisboa)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I203847022","host_organization_name":"Instituto Polit\u00e9cnico de Lisboa","host_organization_lineage":["https://openalex.org/I203847022"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"conference object"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":8,"referenced_works":["https://openalex.org/W1519781644","https://openalex.org/W1577231857","https://openalex.org/W1980030331","https://openalex.org/W2026413648","https://openalex.org/W2119144539","https://openalex.org/W2143754425","https://openalex.org/W2146370523","https://openalex.org/W4297585095"],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2748952813","https://openalex.org/W3176169626","https://openalex.org/W2390279801","https://openalex.org/W1606200072","https://openalex.org/W2358668433","https://openalex.org/W4396701345","https://openalex.org/W2376932109","https://openalex.org/W2001405890","https://openalex.org/W4396696052"],"abstract_inverted_index":null,"counts_by_year":[{"year":2020,"cited_by_count":1},{"year":2014,"cited_by_count":1},{"year":2012,"cited_by_count":1}],"updated_date":"2026-04-04T16:13:02.066488","created_date":"2025-10-10T00:00:00"}
