{"id":"https://openalex.org/W202934580","doi":"https://doi.org/10.1007/978-3-642-24800-9_9","title":"Towards Automatic Pathway Generation from Biological Full-Text Publications","display_name":"Towards Automatic Pathway Generation from Biological Full-Text Publications","publication_year":2011,"publication_date":"2011-01-01","ids":{"openalex":"https://openalex.org/W202934580","doi":"https://doi.org/10.1007/978-3-642-24800-9_9","mag":"202934580"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-642-24800-9_9","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-642-24800-9_9","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5044728438","display_name":"Ekaterina Buyko","orcid":null},"institutions":[{"id":"https://openalex.org/I76198965","display_name":"Friedrich Schiller University Jena","ror":"https://ror.org/05qpz1x62","country_code":"DE","type":"education","lineage":["https://openalex.org/I76198965"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"Ekaterina Buyko","raw_affiliation_strings":["Jena University Language & Information Engineering (JULIE) Lab, Friedrich-Schiller-Universit\u00e4t Jena, Germany"],"affiliations":[{"raw_affiliation_string":"Jena University Language & Information Engineering (JULIE) Lab, Friedrich-Schiller-Universit\u00e4t Jena, Germany","institution_ids":["https://openalex.org/I76198965"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5113160897","display_name":"J\u00f6rg Linde","orcid":null},"institutions":[{"id":"https://openalex.org/I4210162077","display_name":"Leibniz-Institut f\u00fcr Naturstoff-Forschung und Infektionsbiologie e. V. - Hans-Kn\u00f6ll-Institut (HKI)","ror":"https://ror.org/055s37c97","country_code":"DE","type":"facility","lineage":["https://openalex.org/I315704651","https://openalex.org/I4210162077"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"J\u00f6rg Linde","raw_affiliation_strings":["Research Group Systems Biology / Bioinformatics, Leibniz Institute for Natural Product Research and Infection Biology -, Hans Kn\u00f6ll Institute (HKI), Germany"],"affiliations":[{"raw_affiliation_string":"Research Group Systems Biology / Bioinformatics, Leibniz Institute for Natural Product Research and Infection Biology -, Hans Kn\u00f6ll Institute (HKI), Germany","institution_ids":["https://openalex.org/I4210162077"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5047813733","display_name":"Stefan Priebe","orcid":"https://orcid.org/0000-0001-9864-3394"},"institutions":[{"id":"https://openalex.org/I4210162077","display_name":"Leibniz-Institut f\u00fcr Naturstoff-Forschung und Infektionsbiologie e. V. - Hans-Kn\u00f6ll-Institut (HKI)","ror":"https://ror.org/055s37c97","country_code":"DE","type":"facility","lineage":["https://openalex.org/I315704651","https://openalex.org/I4210162077"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Steffen Priebe","raw_affiliation_strings":["Research Group Systems Biology / Bioinformatics, Leibniz Institute for Natural Product Research and Infection Biology -, Hans Kn\u00f6ll Institute (HKI), Germany"],"affiliations":[{"raw_affiliation_string":"Research Group Systems Biology / Bioinformatics, Leibniz Institute for Natural Product Research and Infection Biology -, Hans Kn\u00f6ll Institute (HKI), Germany","institution_ids":["https://openalex.org/I4210162077"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5044841280","display_name":"Udo Hahn","orcid":"https://orcid.org/0000-0002-5052-0245"},"institutions":[{"id":"https://openalex.org/I76198965","display_name":"Friedrich Schiller University Jena","ror":"https://ror.org/05qpz1x62","country_code":"DE","type":"education","lineage":["https://openalex.org/I76198965"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Udo Hahn","raw_affiliation_strings":["Jena University Language & Information Engineering (JULIE) Lab, Friedrich-Schiller-Universit\u00e4t Jena, Germany"],"affiliations":[{"raw_affiliation_string":"Jena University Language & Information Engineering (JULIE) Lab, Friedrich-Schiller-Universit\u00e4t Jena, Germany","institution_ids":["https://openalex.org/I76198965"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5044728438"],"corresponding_institution_ids":["https://openalex.org/I76198965"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.06768489,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"67","last_page":"79"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.9965000152587891,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T13083","display_name":"Advanced Text Analysis Techniques","score":0.9848999977111816,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.836685061454773},{"id":"https://openalex.org/keywords/focus","display_name":"Focus (optics)","score":0.6186056137084961},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.5459597706794739},{"id":"https://openalex.org/keywords/relationship-extraction","display_name":"Relationship extraction","score":0.533968985080719},{"id":"https://openalex.org/keywords/relation","display_name":"Relation (database)","score":0.49033117294311523},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.3307434618473053},{"id":"https://openalex.org/keywords/information-extraction","display_name":"Information extraction","score":0.32616958022117615},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3220256567001343},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3143156170845032}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.836685061454773},{"id":"https://openalex.org/C192209626","wikidata":"https://www.wikidata.org/wiki/Q190909","display_name":"Focus (optics)","level":2,"score":0.6186056137084961},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.5459597706794739},{"id":"https://openalex.org/C153604712","wikidata":"https://www.wikidata.org/wiki/Q7310755","display_name":"Relationship extraction","level":3,"score":0.533968985080719},{"id":"https://openalex.org/C25343380","wikidata":"https://www.wikidata.org/wiki/Q277521","display_name":"Relation (database)","level":2,"score":0.49033117294311523},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.3307434618473053},{"id":"https://openalex.org/C195807954","wikidata":"https://www.wikidata.org/wiki/Q1662562","display_name":"Information extraction","level":2,"score":0.32616958022117615},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3220256567001343},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3143156170845032},{"id":"https://openalex.org/C120665830","wikidata":"https://www.wikidata.org/wiki/Q14620","display_name":"Optics","level":1,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/978-3-642-24800-9_9","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-642-24800-9_9","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":18,"referenced_works":["https://openalex.org/W197223936","https://openalex.org/W228431503","https://openalex.org/W1487958751","https://openalex.org/W1981271533","https://openalex.org/W1987170279","https://openalex.org/W1990928629","https://openalex.org/W2065807795","https://openalex.org/W2100023649","https://openalex.org/W2110025254","https://openalex.org/W2114582148","https://openalex.org/W2123439964","https://openalex.org/W2127224553","https://openalex.org/W2144449189","https://openalex.org/W2146496657","https://openalex.org/W2148130205","https://openalex.org/W2149997683","https://openalex.org/W2166111585","https://openalex.org/W2759927689"],"related_works":["https://openalex.org/W2976808399","https://openalex.org/W2609844752","https://openalex.org/W2981341912","https://openalex.org/W4285246823","https://openalex.org/W4226278302","https://openalex.org/W4221160509","https://openalex.org/W2547211086","https://openalex.org/W2538200646","https://openalex.org/W2888033806","https://openalex.org/W4385734297"],"abstract_inverted_index":null,"counts_by_year":[],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
