{"id":"https://openalex.org/W1942651586","doi":"https://doi.org/10.1007/978-3-642-24669-2_36","title":"Clustering Nodes in Large-Scale Biological Networks Using External Memory Algorithms","display_name":"Clustering Nodes in Large-Scale Biological Networks Using External Memory Algorithms","publication_year":2011,"publication_date":"2011-01-01","ids":{"openalex":"https://openalex.org/W1942651586","doi":"https://doi.org/10.1007/978-3-642-24669-2_36","mag":"1942651586"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-642-24669-2_36","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-642-24669-2_36","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5005061439","display_name":"Ahmed Shamsul Arefin","orcid":"https://orcid.org/0000-0002-9290-3551"},"institutions":[{"id":"https://openalex.org/I78757542","display_name":"University of Newcastle Australia","ror":"https://ror.org/00eae9z71","country_code":"AU","type":"education","lineage":["https://openalex.org/I78757542"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Ahmed Shamsul Arefin","raw_affiliation_strings":["Centre for Bioinformatics, Biomarker Discovery and Information-Based Medicine, The University of Newcastle, Callaghan, New South Wales, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Centre for Bioinformatics, Biomarker Discovery and Information-Based Medicine, The University of Newcastle, Callaghan, New South Wales, Australia","institution_ids":["https://openalex.org/I78757542"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5005828423","display_name":"Mario Inostroza-Ponta","orcid":"https://orcid.org/0000-0003-1295-8972"},"institutions":[{"id":"https://openalex.org/I10457146","display_name":"Universidad de Santiago de Chile","ror":"https://ror.org/02ma57s91","country_code":"CL","type":"education","lineage":["https://openalex.org/I10457146"]}],"countries":["CL"],"is_corresponding":false,"raw_author_name":"Mario Inostroza-Ponta","raw_affiliation_strings":["Departamento de Ingenier\u00eda Inform\u00e1tica, Universidad de Santiago de Chile, Chile"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Departamento de Ingenier\u00eda Inform\u00e1tica, Universidad de Santiago de Chile, Chile","institution_ids":["https://openalex.org/I10457146"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5053706748","display_name":"Luke Mathieson","orcid":"https://orcid.org/0000-0001-6470-2296"},"institutions":[{"id":"https://openalex.org/I99043593","display_name":"Macquarie University","ror":"https://ror.org/01sf06y89","country_code":"AU","type":"education","lineage":["https://openalex.org/I99043593"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Luke Mathieson","raw_affiliation_strings":["Department of Computing, Faculty of Science, Macquarie University, Sydney, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computing, Faculty of Science, Macquarie University, Sydney, Australia","institution_ids":["https://openalex.org/I99043593"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5026652518","display_name":"Regina Berretta","orcid":"https://orcid.org/0000-0002-4420-3446"},"institutions":[{"id":"https://openalex.org/I4210087646","display_name":"Hunter Medical Research Institute","ror":"https://ror.org/0020x6414","country_code":"AU","type":"facility","lineage":["https://openalex.org/I4210087646"]},{"id":"https://openalex.org/I78757542","display_name":"University of Newcastle Australia","ror":"https://ror.org/00eae9z71","country_code":"AU","type":"education","lineage":["https://openalex.org/I78757542"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Regina Berretta","raw_affiliation_strings":["Centre for Bioinformatics, Biomarker Discovery and Information-Based Medicine, The University of Newcastle, Callaghan, New South Wales, Australia","Hunter Medical Research Institute, Information Based Medicine Program, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Centre for Bioinformatics, Biomarker Discovery and Information-Based Medicine, The University of Newcastle, Callaghan, New South Wales, Australia","institution_ids":["https://openalex.org/I78757542"]},{"raw_affiliation_string":"Hunter Medical Research Institute, Information Based Medicine Program, Australia","institution_ids":["https://openalex.org/I4210087646"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5041229487","display_name":"Pablo Moscato","orcid":"https://orcid.org/0000-0003-2570-5966"},"institutions":[{"id":"https://openalex.org/I4210087646","display_name":"Hunter Medical Research Institute","ror":"https://ror.org/0020x6414","country_code":"AU","type":"facility","lineage":["https://openalex.org/I4210087646"]},{"id":"https://openalex.org/I4210146297","display_name":"ARC Centre of Excellence in Advanced Molecular Imaging","ror":"https://ror.org/051e7s436","country_code":"AU","type":"facility","lineage":["https://openalex.org/I1337719021","https://openalex.org/I2801453606","https://openalex.org/I4210132349","https://openalex.org/I4210146297","https://openalex.org/I56590836"]},{"id":"https://openalex.org/I78757542","display_name":"University of Newcastle Australia","ror":"https://ror.org/00eae9z71","country_code":"AU","type":"education","lineage":["https://openalex.org/I78757542"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Pablo Moscato","raw_affiliation_strings":["ARC Centre of Excellence in Bioinformatics, Callaghan, NSW, Australia","Centre for Bioinformatics, Biomarker Discovery and Information-Based Medicine, The University of Newcastle, Callaghan, New South Wales, Australia","Hunter Medical Research Institute, Information Based Medicine Program, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"ARC Centre of Excellence in Bioinformatics, Callaghan, NSW, Australia","institution_ids":["https://openalex.org/I4210146297"]},{"raw_affiliation_string":"Centre for Bioinformatics, Biomarker Discovery and Information-Based Medicine, The University of Newcastle, Callaghan, New South Wales, Australia","institution_ids":["https://openalex.org/I78757542"]},{"raw_affiliation_string":"Hunter Medical Research Institute, Information Based Medicine Program, Australia","institution_ids":["https://openalex.org/I4210087646"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":5,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":4.3529,"has_fulltext":false,"cited_by_count":17,"citation_normalized_percentile":{"value":0.93973458,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":null,"issue":null,"first_page":"375","last_page":"386"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9988999962806702,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9821000099182129,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.85660320520401},{"id":"https://openalex.org/keywords/cluster-analysis","display_name":"Cluster analysis","score":0.7189658880233765},{"id":"https://openalex.org/keywords/scalability","display_name":"Scalability","score":0.6930727958679199},{"id":"https://openalex.org/keywords/biological-network","display_name":"Biological network","score":0.5239627361297607},{"id":"https://openalex.org/keywords/graph","display_name":"Graph","score":0.43531912565231323},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.40970897674560547},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.40828806161880493},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.18123897910118103},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.10818573832511902}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.85660320520401},{"id":"https://openalex.org/C73555534","wikidata":"https://www.wikidata.org/wiki/Q622825","display_name":"Cluster analysis","level":2,"score":0.7189658880233765},{"id":"https://openalex.org/C48044578","wikidata":"https://www.wikidata.org/wiki/Q727490","display_name":"Scalability","level":2,"score":0.6930727958679199},{"id":"https://openalex.org/C28225019","wikidata":"https://www.wikidata.org/wiki/Q4915005","display_name":"Biological network","level":2,"score":0.5239627361297607},{"id":"https://openalex.org/C132525143","wikidata":"https://www.wikidata.org/wiki/Q141488","display_name":"Graph","level":2,"score":0.43531912565231323},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.40970897674560547},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.40828806161880493},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.18123897910118103},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.10818573832511902},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.0},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1007/978-3-642-24669-2_36","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-642-24669-2_36","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},{"id":"pmh:oai:opus.lib.uts.edu.au:10453/119970","is_oa":false,"landing_page_url":"http://hdl.handle.net/10453/119970","pdf_url":null,"source":{"id":"https://openalex.org/S4306401357","display_name":"UTS ePRESS (University of Technology Sydney)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I114017466","host_organization_name":"University of Technology Sydney","host_organization_lineage":["https://openalex.org/I114017466"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Conference Proceeding"},{"id":"pmh:uon:16274","is_oa":false,"landing_page_url":"http://hdl.handle.net/1959.13/1057817","pdf_url":null,"source":{"id":"https://openalex.org/S4377196471","display_name":"NOVA (University of Newcastle Australia)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I78757542","host_organization_name":"University of Newcastle Australia","host_organization_lineage":["https://openalex.org/I78757542"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"conference paper"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":22,"referenced_works":["https://openalex.org/W169782032","https://openalex.org/W358088974","https://openalex.org/W1490574280","https://openalex.org/W1507811735","https://openalex.org/W1509267556","https://openalex.org/W1511107582","https://openalex.org/W1574675314","https://openalex.org/W1585743408","https://openalex.org/W1597952969","https://openalex.org/W1769049279","https://openalex.org/W1803483126","https://openalex.org/W1976496412","https://openalex.org/W1977189366","https://openalex.org/W2046131969","https://openalex.org/W2046441184","https://openalex.org/W2057839002","https://openalex.org/W2103656237","https://openalex.org/W2123464221","https://openalex.org/W2127284416","https://openalex.org/W2160450758","https://openalex.org/W2615963353","https://openalex.org/W6665308329"],"related_works":["https://openalex.org/W2389214306","https://openalex.org/W4235240664","https://openalex.org/W2965083567","https://openalex.org/W1838576100","https://openalex.org/W2095886385","https://openalex.org/W2889616422","https://openalex.org/W2089704382","https://openalex.org/W1983399550","https://openalex.org/W97075385","https://openalex.org/W2357523926"],"abstract_inverted_index":null,"counts_by_year":[{"year":2022,"cited_by_count":1},{"year":2019,"cited_by_count":2},{"year":2017,"cited_by_count":1},{"year":2016,"cited_by_count":3},{"year":2015,"cited_by_count":2},{"year":2014,"cited_by_count":3},{"year":2012,"cited_by_count":5}],"updated_date":"2026-07-02T09:51:11.867554","created_date":"2025-10-10T00:00:00"}
