{"id":"https://openalex.org/W69804055","doi":"https://doi.org/10.1007/978-3-642-24574-9_26","title":"Gene Ontology Based Automated Annotation: Why It Isn\u2019t Working","display_name":"Gene Ontology Based Automated Annotation: Why It Isn\u2019t Working","publication_year":2011,"publication_date":"2011-01-01","ids":{"openalex":"https://openalex.org/W69804055","doi":"https://doi.org/10.1007/978-3-642-24574-9_26","mag":"69804055"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-642-24574-9_26","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-642-24574-9_26","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5078856886","display_name":"Matthijs van der Kroon","orcid":null},"institutions":[{"id":"https://openalex.org/I97750245","display_name":"Software (Spain)","ror":"https://ror.org/02ethns06","country_code":"ES","type":"company","lineage":["https://openalex.org/I4210087817","https://openalex.org/I97750245"]},{"id":"https://openalex.org/I60053951","display_name":"Universitat Polit\u00e8cnica de Val\u00e8ncia","ror":"https://ror.org/01460j859","country_code":"ES","type":"education","lineage":["https://openalex.org/I60053951"]}],"countries":["ES"],"is_corresponding":true,"raw_author_name":"Matthijs van der Kroon","raw_affiliation_strings":["Centro de Investigaci\u00f3n en M\u00e9todos de Producci\u00f3n de Software -PROS, Universidad Polit\u00e9cnica de Valencia, Camino de Vera s/n, 46022, Valencia, Spain","Centro de Investigaci\u00f3n en M\u00e9todos de Producci\u00f3n de Software (ProS), Universidad Polit\u00e9cnica de Valencia, Valencia, Spain"],"affiliations":[{"raw_affiliation_string":"Centro de Investigaci\u00f3n en M\u00e9todos de Producci\u00f3n de Software -PROS, Universidad Polit\u00e9cnica de Valencia, Camino de Vera s/n, 46022, Valencia, Spain","institution_ids":["https://openalex.org/I60053951"]},{"raw_affiliation_string":"Centro de Investigaci\u00f3n en M\u00e9todos de Producci\u00f3n de Software (ProS), Universidad Polit\u00e9cnica de Valencia, Valencia, Spain","institution_ids":["https://openalex.org/I60053951","https://openalex.org/I97750245"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5073277195","display_name":"Ana M. Lev\u00edn","orcid":null},"institutions":[{"id":"https://openalex.org/I97750245","display_name":"Software (Spain)","ror":"https://ror.org/02ethns06","country_code":"ES","type":"company","lineage":["https://openalex.org/I4210087817","https://openalex.org/I97750245"]},{"id":"https://openalex.org/I60053951","display_name":"Universitat Polit\u00e8cnica de Val\u00e8ncia","ror":"https://ror.org/01460j859","country_code":"ES","type":"education","lineage":["https://openalex.org/I60053951"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Ana M. Levin","raw_affiliation_strings":["Centro de Investigaci\u00f3n en M\u00e9todos de Producci\u00f3n de Software -PROS, Universidad Polit\u00e9cnica de Valencia, Camino de Vera s/n, 46022, Valencia, Spain","Centro de Investigaci\u00f3n en M\u00e9todos de Producci\u00f3n de Software (ProS), Universidad Polit\u00e9cnica de Valencia, Valencia, Spain"],"affiliations":[{"raw_affiliation_string":"Centro de Investigaci\u00f3n en M\u00e9todos de Producci\u00f3n de Software -PROS, Universidad Polit\u00e9cnica de Valencia, Camino de Vera s/n, 46022, Valencia, Spain","institution_ids":["https://openalex.org/I60053951"]},{"raw_affiliation_string":"Centro de Investigaci\u00f3n en M\u00e9todos de Producci\u00f3n de Software (ProS), Universidad Polit\u00e9cnica de Valencia, Valencia, Spain","institution_ids":["https://openalex.org/I60053951","https://openalex.org/I97750245"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5078856886"],"corresponding_institution_ids":["https://openalex.org/I60053951","https://openalex.org/I97750245"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":1.0596,"has_fulltext":false,"cited_by_count":2,"citation_normalized_percentile":{"value":0.75594855,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":94,"max":96},"biblio":{"volume":null,"issue":null,"first_page":"203","last_page":"209"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9922000169754028,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7658450603485107},{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.7368124723434448},{"id":"https://openalex.org/keywords/ontology","display_name":"Ontology","score":0.6143300533294678},{"id":"https://openalex.org/keywords/domain","display_name":"Domain (mathematical analysis)","score":0.5397634506225586},{"id":"https://openalex.org/keywords/milestone","display_name":"Milestone","score":0.5064274072647095},{"id":"https://openalex.org/keywords/process","display_name":"Process (computing)","score":0.49719956517219543},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.4971800148487091},{"id":"https://openalex.org/keywords/meaning","display_name":"Meaning (existential)","score":0.45691853761672974},{"id":"https://openalex.org/keywords/genomics","display_name":"Genomics","score":0.42741167545318604},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.31101760268211365},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.29810911417007446},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.11982643604278564},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.09228727221488953},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.07455548644065857}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7658450603485107},{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.7368124723434448},{"id":"https://openalex.org/C25810664","wikidata":"https://www.wikidata.org/wiki/Q44325","display_name":"Ontology","level":2,"score":0.6143300533294678},{"id":"https://openalex.org/C36503486","wikidata":"https://www.wikidata.org/wiki/Q11235244","display_name":"Domain (mathematical analysis)","level":2,"score":0.5397634506225586},{"id":"https://openalex.org/C120060458","wikidata":"https://www.wikidata.org/wiki/Q10145","display_name":"Milestone","level":2,"score":0.5064274072647095},{"id":"https://openalex.org/C98045186","wikidata":"https://www.wikidata.org/wiki/Q205663","display_name":"Process (computing)","level":2,"score":0.49719956517219543},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.4971800148487091},{"id":"https://openalex.org/C2780876879","wikidata":"https://www.wikidata.org/wiki/Q3054749","display_name":"Meaning (existential)","level":2,"score":0.45691853761672974},{"id":"https://openalex.org/C189206191","wikidata":"https://www.wikidata.org/wiki/Q222046","display_name":"Genomics","level":4,"score":0.42741167545318604},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.31101760268211365},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.29810911417007446},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.11982643604278564},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.09228727221488953},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.07455548644065857},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0},{"id":"https://openalex.org/C95457728","wikidata":"https://www.wikidata.org/wiki/Q309","display_name":"History","level":0,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0},{"id":"https://openalex.org/C166957645","wikidata":"https://www.wikidata.org/wiki/Q23498","display_name":"Archaeology","level":1,"score":0.0},{"id":"https://openalex.org/C542102704","wikidata":"https://www.wikidata.org/wiki/Q183257","display_name":"Psychotherapist","level":1,"score":0.0},{"id":"https://openalex.org/C15744967","wikidata":"https://www.wikidata.org/wiki/Q9418","display_name":"Psychology","level":0,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/978-3-642-24574-9_26","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-642-24574-9_26","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":18,"referenced_works":["https://openalex.org/W62872901","https://openalex.org/W171983284","https://openalex.org/W1556376185","https://openalex.org/W1563266625","https://openalex.org/W1602650507","https://openalex.org/W1748928863","https://openalex.org/W1836367264","https://openalex.org/W1887202616","https://openalex.org/W1973712872","https://openalex.org/W1991183254","https://openalex.org/W2091572769","https://openalex.org/W2103017472","https://openalex.org/W2106909001","https://openalex.org/W2127230663","https://openalex.org/W2135230352","https://openalex.org/W2148984584","https://openalex.org/W2167309441","https://openalex.org/W2505570079"],"related_works":["https://openalex.org/W4387878404","https://openalex.org/W2561695978","https://openalex.org/W1950486549","https://openalex.org/W3133583653","https://openalex.org/W3140574787","https://openalex.org/W2584040191","https://openalex.org/W2990251955","https://openalex.org/W2064167013","https://openalex.org/W2490667451","https://openalex.org/W2955244041"],"abstract_inverted_index":null,"counts_by_year":[{"year":2012,"cited_by_count":2}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
