{"id":"https://openalex.org/W157806524","doi":"https://doi.org/10.1007/978-3-642-21934-4_42","title":"Limitations of Using Mass Action Kinetics Method in Modeling Biochemical Systems: Illustration for a Second Order Reaction","display_name":"Limitations of Using Mass Action Kinetics Method in Modeling Biochemical Systems: Illustration for a Second Order Reaction","publication_year":2011,"publication_date":"2011-01-01","ids":{"openalex":"https://openalex.org/W157806524","doi":"https://doi.org/10.1007/978-3-642-21934-4_42","mag":"157806524"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-642-21934-4_42","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-642-21934-4_42","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5041589445","display_name":"\u00c7i\u011fdem Say\u0131kl\u0131","orcid":null},"institutions":[{"id":"https://openalex.org/I125454184","display_name":"Nam\u0131k Kemal University","ror":"https://ror.org/01a0mk874","country_code":"TR","type":"education","lineage":["https://openalex.org/I125454184"]}],"countries":["TR"],"is_corresponding":true,"raw_author_name":"Cigdem Sayikli","raw_affiliation_strings":["Biology Department, Faculty of Arts and Sciences, Namik Kemal University, Tekirdag, Turkey","Biology Department, Faculty of Arts and Sciences, Namik Kemal University, Namik Kemal University, Tekirdag, Turkey#TAB#"],"affiliations":[{"raw_affiliation_string":"Biology Department, Faculty of Arts and Sciences, Namik Kemal University, Tekirdag, Turkey","institution_ids":["https://openalex.org/I125454184"]},{"raw_affiliation_string":"Biology Department, Faculty of Arts and Sciences, Namik Kemal University, Namik Kemal University, Tekirdag, Turkey#TAB#","institution_ids":["https://openalex.org/I125454184"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5089530048","display_name":"Elife Zerrin Bagci","orcid":"https://orcid.org/0000-0001-5920-0400"},"institutions":[{"id":"https://openalex.org/I125454184","display_name":"Nam\u0131k Kemal University","ror":"https://ror.org/01a0mk874","country_code":"TR","type":"education","lineage":["https://openalex.org/I125454184"]}],"countries":["TR"],"is_corresponding":false,"raw_author_name":"Elife Zerrin Bagci","raw_affiliation_strings":["Biology Department, Faculty of Arts and Sciences, Namik Kemal University, Tekirdag, Turkey","Biology Department, Faculty of Arts and Sciences, Namik Kemal University, Namik Kemal University, Tekirdag, Turkey#TAB#"],"affiliations":[{"raw_affiliation_string":"Biology Department, Faculty of Arts and Sciences, Namik Kemal University, Tekirdag, Turkey","institution_ids":["https://openalex.org/I125454184"]},{"raw_affiliation_string":"Biology Department, Faculty of Arts and Sciences, Namik Kemal University, Namik Kemal University, Tekirdag, Turkey#TAB#","institution_ids":["https://openalex.org/I125454184"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5041589445"],"corresponding_institution_ids":["https://openalex.org/I125454184"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":0.5298,"has_fulltext":false,"cited_by_count":5,"citation_normalized_percentile":{"value":0.65490354,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":null,"issue":null,"first_page":"521","last_page":"526"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9950000047683716,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.9843999743461609,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6752164363861084},{"id":"https://openalex.org/keywords/action","display_name":"Action (physics)","score":0.6463311910629272},{"id":"https://openalex.org/keywords/simple","display_name":"Simple (philosophy)","score":0.5527945756912231},{"id":"https://openalex.org/keywords/component","display_name":"Component (thermodynamics)","score":0.5431448817253113},{"id":"https://openalex.org/keywords/nonlinear-system","display_name":"Nonlinear system","score":0.5376061201095581},{"id":"https://openalex.org/keywords/law-of-mass-action","display_name":"Law of mass action","score":0.4906841516494751},{"id":"https://openalex.org/keywords/modelling-biological-systems","display_name":"Modelling biological systems","score":0.4847080707550049},{"id":"https://openalex.org/keywords/stochastic-process","display_name":"Stochastic process","score":0.43026846647262573},{"id":"https://openalex.org/keywords/biological-system","display_name":"Biological system","score":0.38926875591278076},{"id":"https://openalex.org/keywords/applied-mathematics","display_name":"Applied mathematics","score":0.3811507523059845},{"id":"https://openalex.org/keywords/statistical-physics","display_name":"Statistical physics","score":0.3645203709602356},{"id":"https://openalex.org/keywords/systems-biology","display_name":"Systems biology","score":0.33393388986587524},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.25090616941452026},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.18980500102043152},{"id":"https://openalex.org/keywords/thermodynamics","display_name":"Thermodynamics","score":0.10473090410232544},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.10138246417045593},{"id":"https://openalex.org/keywords/statistics","display_name":"Statistics","score":0.09624102711677551},{"id":"https://openalex.org/keywords/physics","display_name":"Physics","score":0.08324447274208069},{"id":"https://openalex.org/keywords/physical-chemistry","display_name":"Physical chemistry","score":0.07763361930847168}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6752164363861084},{"id":"https://openalex.org/C2780791683","wikidata":"https://www.wikidata.org/wiki/Q846785","display_name":"Action (physics)","level":2,"score":0.6463311910629272},{"id":"https://openalex.org/C2780586882","wikidata":"https://www.wikidata.org/wiki/Q7520643","display_name":"Simple (philosophy)","level":2,"score":0.5527945756912231},{"id":"https://openalex.org/C168167062","wikidata":"https://www.wikidata.org/wiki/Q1117970","display_name":"Component (thermodynamics)","level":2,"score":0.5431448817253113},{"id":"https://openalex.org/C158622935","wikidata":"https://www.wikidata.org/wiki/Q660848","display_name":"Nonlinear system","level":2,"score":0.5376061201095581},{"id":"https://openalex.org/C67425144","wikidata":"https://www.wikidata.org/wiki/Q899494","display_name":"Law of mass action","level":2,"score":0.4906841516494751},{"id":"https://openalex.org/C137866125","wikidata":"https://www.wikidata.org/wiki/Q4299308","display_name":"Modelling biological systems","level":3,"score":0.4847080707550049},{"id":"https://openalex.org/C8272713","wikidata":"https://www.wikidata.org/wiki/Q176737","display_name":"Stochastic process","level":2,"score":0.43026846647262573},{"id":"https://openalex.org/C186060115","wikidata":"https://www.wikidata.org/wiki/Q30336093","display_name":"Biological system","level":1,"score":0.38926875591278076},{"id":"https://openalex.org/C28826006","wikidata":"https://www.wikidata.org/wiki/Q33521","display_name":"Applied mathematics","level":1,"score":0.3811507523059845},{"id":"https://openalex.org/C121864883","wikidata":"https://www.wikidata.org/wiki/Q677916","display_name":"Statistical physics","level":1,"score":0.3645203709602356},{"id":"https://openalex.org/C152662350","wikidata":"https://www.wikidata.org/wiki/Q815297","display_name":"Systems biology","level":2,"score":0.33393388986587524},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.25090616941452026},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.18980500102043152},{"id":"https://openalex.org/C97355855","wikidata":"https://www.wikidata.org/wiki/Q11473","display_name":"Thermodynamics","level":1,"score":0.10473090410232544},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.10138246417045593},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.09624102711677551},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.08324447274208069},{"id":"https://openalex.org/C147789679","wikidata":"https://www.wikidata.org/wiki/Q11372","display_name":"Physical chemistry","level":1,"score":0.07763361930847168},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/978-3-642-21934-4_42","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-642-21934-4_42","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":4,"referenced_works":["https://openalex.org/W1568106481","https://openalex.org/W1573602524","https://openalex.org/W2064483836","https://openalex.org/W2117056464"],"related_works":["https://openalex.org/W4386563820","https://openalex.org/W631732704","https://openalex.org/W1968058641","https://openalex.org/W2155261113","https://openalex.org/W1748979965","https://openalex.org/W3199870583","https://openalex.org/W1593256703","https://openalex.org/W4254550161","https://openalex.org/W1497779830","https://openalex.org/W2057769265"],"abstract_inverted_index":null,"counts_by_year":[{"year":2023,"cited_by_count":2},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":1},{"year":2013,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
