{"id":"https://openalex.org/W2208566223","doi":"https://doi.org/10.1007/978-3-642-21878-1_22","title":"ProtTest-HPC: Fast Selection of Best-Fit Models of Protein Evolution","display_name":"ProtTest-HPC: Fast Selection of Best-Fit Models of Protein Evolution","publication_year":2011,"publication_date":"2011-01-01","ids":{"openalex":"https://openalex.org/W2208566223","doi":"https://doi.org/10.1007/978-3-642-21878-1_22","mag":"2208566223"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-642-21878-1_22","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-642-21878-1_22","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5087352477","display_name":"Diego Darriba","orcid":"https://orcid.org/0000-0001-5482-3932"},"institutions":[{"id":"https://openalex.org/I11019714","display_name":"Universidade da Coru\u00f1a","ror":"https://ror.org/01qckj285","country_code":"ES","type":"education","lineage":["https://openalex.org/I11019714"]},{"id":"https://openalex.org/I6289922","display_name":"Universidade de Vigo","ror":"https://ror.org/05rdf8595","country_code":"ES","type":"education","lineage":["https://openalex.org/I6289922"]}],"countries":["ES"],"is_corresponding":true,"raw_author_name":"Diego Darriba","raw_affiliation_strings":["Bioinformatics and Molecular Evolution Group, University of Vigo, 36310, Vigo, Spain","Computer Architecture Group, University of A Coru\u00f1a, 15071, A Coru\u00f1a, Spain"],"affiliations":[{"raw_affiliation_string":"Bioinformatics and Molecular Evolution Group, University of Vigo, 36310, Vigo, Spain","institution_ids":["https://openalex.org/I6289922"]},{"raw_affiliation_string":"Computer Architecture Group, University of A Coru\u00f1a, 15071, A Coru\u00f1a, Spain","institution_ids":["https://openalex.org/I11019714"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5049011209","display_name":"Guillermo L. Taboada","orcid":"https://orcid.org/0000-0002-6281-6641"},"institutions":[{"id":"https://openalex.org/I11019714","display_name":"Universidade da Coru\u00f1a","ror":"https://ror.org/01qckj285","country_code":"ES","type":"education","lineage":["https://openalex.org/I11019714"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Guillermo L. Taboada","raw_affiliation_strings":["Computer Architecture Group, University of A Coru\u00f1a, 15071, A Coru\u00f1a, Spain"],"affiliations":[{"raw_affiliation_string":"Computer Architecture Group, University of A Coru\u00f1a, 15071, A Coru\u00f1a, Spain","institution_ids":["https://openalex.org/I11019714"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5070686724","display_name":"Ram\u00f3n Doallo","orcid":"https://orcid.org/0000-0002-6011-3387"},"institutions":[{"id":"https://openalex.org/I11019714","display_name":"Universidade da Coru\u00f1a","ror":"https://ror.org/01qckj285","country_code":"ES","type":"education","lineage":["https://openalex.org/I11019714"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Ram\u00f3n Doallo","raw_affiliation_strings":["Computer Architecture Group, University of A Coru\u00f1a, 15071, A Coru\u00f1a, Spain"],"affiliations":[{"raw_affiliation_string":"Computer Architecture Group, University of A Coru\u00f1a, 15071, A Coru\u00f1a, Spain","institution_ids":["https://openalex.org/I11019714"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5042649313","display_name":"David Posada","orcid":"https://orcid.org/0000-0003-1407-3406"},"institutions":[{"id":"https://openalex.org/I6289922","display_name":"Universidade de Vigo","ror":"https://ror.org/05rdf8595","country_code":"ES","type":"education","lineage":["https://openalex.org/I6289922"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"David Posada","raw_affiliation_strings":["Bioinformatics and Molecular Evolution Group, University of Vigo, 36310, Vigo, Spain"],"affiliations":[{"raw_affiliation_string":"Bioinformatics and Molecular Evolution Group, University of Vigo, 36310, Vigo, Spain","institution_ids":["https://openalex.org/I6289922"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5087352477"],"corresponding_institution_ids":["https://openalex.org/I11019714","https://openalex.org/I6289922"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":82.1171,"has_fulltext":false,"cited_by_count":817,"citation_normalized_percentile":{"value":1.0,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":94,"max":100},"biblio":{"volume":null,"issue":null,"first_page":"177","last_page":"184"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9986000061035156,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9986000061035156,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9980999827384949,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9652000069618225,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8709096908569336},{"id":"https://openalex.org/keywords/supercomputer","display_name":"Supercomputer","score":0.749970018863678},{"id":"https://openalex.org/keywords/parallel-computing","display_name":"Parallel computing","score":0.644736647605896},{"id":"https://openalex.org/keywords/selection","display_name":"Selection (genetic algorithm)","score":0.6005343198776245},{"id":"https://openalex.org/keywords/probabilistic-logic","display_name":"Probabilistic logic","score":0.5339231491088867},{"id":"https://openalex.org/keywords/task","display_name":"Task (project management)","score":0.513297975063324},{"id":"https://openalex.org/keywords/cluster","display_name":"Cluster (spacecraft)","score":0.4894641637802124},{"id":"https://openalex.org/keywords/computational-complexity-theory","display_name":"Computational complexity theory","score":0.4552319645881653},{"id":"https://openalex.org/keywords/gpu-cluster","display_name":"GPU cluster","score":0.436772882938385},{"id":"https://openalex.org/keywords/computer-cluster","display_name":"Computer cluster","score":0.42595288157463074},{"id":"https://openalex.org/keywords/distributed-computing","display_name":"Distributed computing","score":0.3837515711784363},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.21626359224319458},{"id":"https://openalex.org/keywords/operating-system","display_name":"Operating system","score":0.20722505450248718},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.17146265506744385},{"id":"https://openalex.org/keywords/cuda","display_name":"CUDA","score":0.12114870548248291}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8709096908569336},{"id":"https://openalex.org/C83283714","wikidata":"https://www.wikidata.org/wiki/Q121117","display_name":"Supercomputer","level":2,"score":0.749970018863678},{"id":"https://openalex.org/C173608175","wikidata":"https://www.wikidata.org/wiki/Q232661","display_name":"Parallel computing","level":1,"score":0.644736647605896},{"id":"https://openalex.org/C81917197","wikidata":"https://www.wikidata.org/wiki/Q628760","display_name":"Selection (genetic algorithm)","level":2,"score":0.6005343198776245},{"id":"https://openalex.org/C49937458","wikidata":"https://www.wikidata.org/wiki/Q2599292","display_name":"Probabilistic logic","level":2,"score":0.5339231491088867},{"id":"https://openalex.org/C2780451532","wikidata":"https://www.wikidata.org/wiki/Q759676","display_name":"Task (project management)","level":2,"score":0.513297975063324},{"id":"https://openalex.org/C164866538","wikidata":"https://www.wikidata.org/wiki/Q367351","display_name":"Cluster (spacecraft)","level":2,"score":0.4894641637802124},{"id":"https://openalex.org/C179799912","wikidata":"https://www.wikidata.org/wiki/Q205084","display_name":"Computational complexity theory","level":2,"score":0.4552319645881653},{"id":"https://openalex.org/C2781335571","wikidata":"https://www.wikidata.org/wiki/Q2633544","display_name":"GPU cluster","level":3,"score":0.436772882938385},{"id":"https://openalex.org/C29140674","wikidata":"https://www.wikidata.org/wiki/Q206637","display_name":"Computer cluster","level":2,"score":0.42595288157463074},{"id":"https://openalex.org/C120314980","wikidata":"https://www.wikidata.org/wiki/Q180634","display_name":"Distributed computing","level":1,"score":0.3837515711784363},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.21626359224319458},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.20722505450248718},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.17146265506744385},{"id":"https://openalex.org/C2778119891","wikidata":"https://www.wikidata.org/wiki/Q477690","display_name":"CUDA","level":2,"score":0.12114870548248291},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0},{"id":"https://openalex.org/C187736073","wikidata":"https://www.wikidata.org/wiki/Q2920921","display_name":"Management","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/978-3-642-21878-1_22","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-642-21878-1_22","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":18,"referenced_works":["https://openalex.org/W1633681515","https://openalex.org/W1988949004","https://openalex.org/W2016811301","https://openalex.org/W2017519756","https://openalex.org/W2024341709","https://openalex.org/W2046808664","https://openalex.org/W2062018285","https://openalex.org/W2065819022","https://openalex.org/W2086148871","https://openalex.org/W2099274429","https://openalex.org/W2101846955","https://openalex.org/W2103546861","https://openalex.org/W2104891575","https://openalex.org/W2117059491","https://openalex.org/W2137429721","https://openalex.org/W2138178197","https://openalex.org/W2144654387","https://openalex.org/W2163627198"],"related_works":["https://openalex.org/W2525033434","https://openalex.org/W4280533024","https://openalex.org/W1966243865","https://openalex.org/W4300992253","https://openalex.org/W1942762218","https://openalex.org/W1985270856","https://openalex.org/W1582436825","https://openalex.org/W3101274117","https://openalex.org/W4298207756","https://openalex.org/W1966875563"],"abstract_inverted_index":null,"counts_by_year":[{"year":2025,"cited_by_count":4},{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":3},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":69},{"year":2020,"cited_by_count":110},{"year":2019,"cited_by_count":99},{"year":2018,"cited_by_count":115},{"year":2017,"cited_by_count":97},{"year":2016,"cited_by_count":81},{"year":2015,"cited_by_count":80},{"year":2014,"cited_by_count":69},{"year":2013,"cited_by_count":56},{"year":2012,"cited_by_count":26}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
