{"id":"https://openalex.org/W1988109271","doi":"https://doi.org/10.1007/978-3-642-21260-4_39","title":"A Systematic Comparison of Genome Scale Clustering Algorithms","display_name":"A Systematic Comparison of Genome Scale Clustering Algorithms","publication_year":2011,"publication_date":"2011-01-01","ids":{"openalex":"https://openalex.org/W1988109271","doi":"https://doi.org/10.1007/978-3-642-21260-4_39","mag":"1988109271"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-642-21260-4_39","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-642-21260-4_39","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5014072628","display_name":"Jeremy J. Jay","orcid":"https://orcid.org/0000-0002-5761-7533"},"institutions":[{"id":"https://openalex.org/I4210115256","display_name":"Jackson Laboratory","ror":"https://ror.org/021sy4w91","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210115256"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jeremy J. Jay","raw_affiliation_strings":["The Jackson Laboratory, Bar Harbor, ME, 04609, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"The Jackson Laboratory, Bar Harbor, ME, 04609, USA","institution_ids":["https://openalex.org/I4210115256"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5070196212","display_name":"John D. Eblen","orcid":"https://orcid.org/0000-0002-5755-3381"},"institutions":[{"id":"https://openalex.org/I75027704","display_name":"University of Tennessee at Knoxville","ror":"https://ror.org/020f3ap87","country_code":"US","type":"education","lineage":["https://openalex.org/I75027704"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"John D. Eblen","raw_affiliation_strings":["University of Tennessee, Knoxville, TN, 37995, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Tennessee, Knoxville, TN, 37995, USA","institution_ids":["https://openalex.org/I75027704"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100356801","display_name":"Yun Zhang","orcid":"https://orcid.org/0000-0002-3309-6358"},"institutions":[{"id":"https://openalex.org/I75027704","display_name":"University of Tennessee at Knoxville","ror":"https://ror.org/020f3ap87","country_code":"US","type":"education","lineage":["https://openalex.org/I75027704"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Yun Zhang","raw_affiliation_strings":["University of Tennessee, Knoxville, TN, 37995, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Tennessee, Knoxville, TN, 37995, USA","institution_ids":["https://openalex.org/I75027704"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5049770857","display_name":"Mikael Benson","orcid":"https://orcid.org/0000-0002-7753-9181"},"institutions":[{"id":"https://openalex.org/I881427289","display_name":"University of Gothenburg","ror":"https://ror.org/01tm6cn81","country_code":"SE","type":"education","lineage":["https://openalex.org/I881427289"]}],"countries":["SE"],"is_corresponding":false,"raw_author_name":"Mikael Benson","raw_affiliation_strings":["University of G\u00f6teborg, SE40530, G\u00f6teborg, Sweden"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of G\u00f6teborg, SE40530, G\u00f6teborg, Sweden","institution_ids":["https://openalex.org/I881427289"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5005914571","display_name":"Andy Perkins","orcid":"https://orcid.org/0000-0002-3583-1010"},"institutions":[{"id":"https://openalex.org/I99041443","display_name":"Mississippi State University","ror":"https://ror.org/0432jq872","country_code":"US","type":"education","lineage":["https://openalex.org/I4210141039","https://openalex.org/I99041443"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Andy D. Perkins","raw_affiliation_strings":["Mississippi State University, Mississippi State MS, 39762, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Mississippi State University, Mississippi State MS, 39762, USA","institution_ids":["https://openalex.org/I99041443"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5041646784","display_name":"Arnold M. Saxton","orcid":"https://orcid.org/0000-0003-3345-5127"},"institutions":[{"id":"https://openalex.org/I75027704","display_name":"University of Tennessee at Knoxville","ror":"https://ror.org/020f3ap87","country_code":"US","type":"education","lineage":["https://openalex.org/I75027704"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Arnold M. Saxton","raw_affiliation_strings":["University of Tennessee, Knoxville, TN, 37995, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Tennessee, Knoxville, TN, 37995, USA","institution_ids":["https://openalex.org/I75027704"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5007918640","display_name":"Brynn H. Voy","orcid":"https://orcid.org/0000-0003-1923-9110"},"institutions":[{"id":"https://openalex.org/I75027704","display_name":"University of Tennessee at Knoxville","ror":"https://ror.org/020f3ap87","country_code":"US","type":"education","lineage":["https://openalex.org/I75027704"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Brynn H. Voy","raw_affiliation_strings":["University of Tennessee, Knoxville, TN, 37995, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Tennessee, Knoxville, TN, 37995, USA","institution_ids":["https://openalex.org/I75027704"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5022843316","display_name":"Elissa J. Chesler","orcid":"https://orcid.org/0000-0002-5642-5062"},"institutions":[{"id":"https://openalex.org/I4210115256","display_name":"Jackson Laboratory","ror":"https://ror.org/021sy4w91","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210115256"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Elissa J. Chesler","raw_affiliation_strings":["The Jackson Laboratory, Bar Harbor, ME, 04609, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"The Jackson Laboratory, Bar Harbor, ME, 04609, USA","institution_ids":["https://openalex.org/I4210115256"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5011863644","display_name":"Michael A. Langston","orcid":"https://orcid.org/0000-0001-5945-5796"},"institutions":[{"id":"https://openalex.org/I75027704","display_name":"University of Tennessee at Knoxville","ror":"https://ror.org/020f3ap87","country_code":"US","type":"education","lineage":["https://openalex.org/I75027704"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Michael A. Langston","raw_affiliation_strings":["University of Tennessee, Knoxville, TN, 37995, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Tennessee, Knoxville, TN, 37995, USA","institution_ids":["https://openalex.org/I75027704"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":4,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":9,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"416","last_page":"427"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10222","display_name":"Genomics and Chromatin Dynamics","score":0.9822999835014343,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/cluster-analysis","display_name":"Cluster analysis","score":0.7584478855133057},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6794423460960388},{"id":"https://openalex.org/keywords/jaccard-index","display_name":"Jaccard index","score":0.659294843673706},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.5093165636062622},{"id":"https://openalex.org/keywords/hierarchical-clustering","display_name":"Hierarchical clustering","score":0.46382561326026917},{"id":"https://openalex.org/keywords/graph","display_name":"Graph","score":0.4529482424259186},{"id":"https://openalex.org/keywords/ranking","display_name":"Ranking (information retrieval)","score":0.4163970649242401},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.26548826694488525},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.22471502423286438}],"concepts":[{"id":"https://openalex.org/C73555534","wikidata":"https://www.wikidata.org/wiki/Q622825","display_name":"Cluster analysis","level":2,"score":0.7584478855133057},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6794423460960388},{"id":"https://openalex.org/C203519979","wikidata":"https://www.wikidata.org/wiki/Q865360","display_name":"Jaccard index","level":3,"score":0.659294843673706},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.5093165636062622},{"id":"https://openalex.org/C92835128","wikidata":"https://www.wikidata.org/wiki/Q1277447","display_name":"Hierarchical clustering","level":3,"score":0.46382561326026917},{"id":"https://openalex.org/C132525143","wikidata":"https://www.wikidata.org/wiki/Q141488","display_name":"Graph","level":2,"score":0.4529482424259186},{"id":"https://openalex.org/C189430467","wikidata":"https://www.wikidata.org/wiki/Q7293293","display_name":"Ranking (information retrieval)","level":2,"score":0.4163970649242401},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.26548826694488525},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.22471502423286438}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1007/978-3-642-21260-4_39","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-642-21260-4_39","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},{"id":"pmh:oai:mouseion.jax.org:stfb2012-1138","is_oa":false,"landing_page_url":"https://mouseion.jax.org/stfb2012/141","pdf_url":null,"source":{"id":"https://openalex.org/S4377196421","display_name":"The Mouseion at the JAXlibrary (Jackson Laboratory)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210115256","host_organization_name":"Jackson Laboratory","host_organization_lineage":["https://openalex.org/I4210115256"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Faculty Research 2012","raw_type":"text"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":55,"referenced_works":["https://openalex.org/W45534775","https://openalex.org/W1513910506","https://openalex.org/W1530803355","https://openalex.org/W1556472699","https://openalex.org/W1575299154","https://openalex.org/W1580304490","https://openalex.org/W1766157213","https://openalex.org/W1975152892","https://openalex.org/W1976208596","https://openalex.org/W1977556410","https://openalex.org/W1992452843","https://openalex.org/W2001781153","https://openalex.org/W2016381774","https://openalex.org/W2016493165","https://openalex.org/W2019997982","https://openalex.org/W2020448260","https://openalex.org/W2020681752","https://openalex.org/W2030644393","https://openalex.org/W2039777025","https://openalex.org/W2060705109","https://openalex.org/W2087886864","https://openalex.org/W2091480648","https://openalex.org/W2092003722","https://openalex.org/W2099182237","https://openalex.org/W2100990314","https://openalex.org/W2102992354","https://openalex.org/W2103017472","https://openalex.org/W2109174028","https://openalex.org/W2116007667","https://openalex.org/W2122683221","https://openalex.org/W2123060905","https://openalex.org/W2130479394","https://openalex.org/W2131456395","https://openalex.org/W2133098435","https://openalex.org/W2135187880","https://openalex.org/W2135230352","https://openalex.org/W2140736261","https://openalex.org/W2141012957","https://openalex.org/W2141885858","https://openalex.org/W2152360905","https://openalex.org/W2153283265","https://openalex.org/W2157305458","https://openalex.org/W2162735386","https://openalex.org/W2164928285","https://openalex.org/W2165533101","https://openalex.org/W2170584976","https://openalex.org/W2330846461","https://openalex.org/W2611831635","https://openalex.org/W2614237344","https://openalex.org/W3152026761","https://openalex.org/W4235169531","https://openalex.org/W4240861547","https://openalex.org/W4249273120","https://openalex.org/W4285719527","https://openalex.org/W6681765588"],"related_works":["https://openalex.org/W4254879869","https://openalex.org/W3022576529","https://openalex.org/W2628526247","https://openalex.org/W2596401011","https://openalex.org/W2913569734","https://openalex.org/W4401519790","https://openalex.org/W2702570413","https://openalex.org/W2093888054","https://openalex.org/W4226263291","https://openalex.org/W3200375535"],"abstract_inverted_index":null,"counts_by_year":[{"year":2021,"cited_by_count":2},{"year":2020,"cited_by_count":1},{"year":2018,"cited_by_count":1},{"year":2014,"cited_by_count":1},{"year":2012,"cited_by_count":2}],"updated_date":"2026-07-14T23:27:15.235271","created_date":"2025-10-10T00:00:00"}
