{"id":"https://openalex.org/W2156382257","doi":"https://doi.org/10.1007/978-3-642-20998-7_57","title":"An Optimal Mesh Algorithm for Remote Protein Homology Detection","display_name":"An Optimal Mesh Algorithm for Remote Protein Homology Detection","publication_year":2011,"publication_date":"2011-01-01","ids":{"openalex":"https://openalex.org/W2156382257","doi":"https://doi.org/10.1007/978-3-642-20998-7_57","mag":"2156382257"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-642-20998-7_57","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-642-20998-7_57","pdf_url":null,"source":{"id":"https://openalex.org/S2764900261","display_name":"Communications in computer and information science","issn_l":"1865-0929","issn":["1865-0929","1865-0937"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Communications in Computer and Information Science","raw_type":"book-chapter"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5087300354","display_name":"Firdaus M. Abdullah","orcid":null},"institutions":[{"id":"https://openalex.org/I4576418","display_name":"University of Technology Malaysia","ror":"https://ror.org/026w31v75","country_code":"MY","type":"education","lineage":["https://openalex.org/I4576418"]}],"countries":["MY"],"is_corresponding":false,"raw_author_name":"Firdaus M. Abdullah","raw_affiliation_strings":["Laboratory of Computational Intelligence and Biotechnology, Universiti Teknologi Malaysia, 81310, UTM Skudai, Malaysia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Laboratory of Computational Intelligence and Biotechnology, Universiti Teknologi Malaysia, 81310, UTM Skudai, Malaysia","institution_ids":["https://openalex.org/I4576418"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102263897","display_name":"Razib M. Othman","orcid":null},"institutions":[{"id":"https://openalex.org/I4576418","display_name":"University of Technology Malaysia","ror":"https://ror.org/026w31v75","country_code":"MY","type":"education","lineage":["https://openalex.org/I4576418"]}],"countries":["MY"],"is_corresponding":false,"raw_author_name":"Razib M. Othman","raw_affiliation_strings":["Laboratory of Computational Intelligence and Biotechnology, Universiti Teknologi Malaysia, 81310, UTM Skudai, Malaysia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Laboratory of Computational Intelligence and Biotechnology, Universiti Teknologi Malaysia, 81310, UTM Skudai, Malaysia","institution_ids":["https://openalex.org/I4576418"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5064913575","display_name":"Shahreen Kasim","orcid":"https://orcid.org/0000-0002-4180-4377"},"institutions":[{"id":"https://openalex.org/I930072361","display_name":"Tun Hussein Onn University of Malaysia","ror":"https://ror.org/01c5wha71","country_code":"MY","type":"education","lineage":["https://openalex.org/I930072361"]}],"countries":["MY"],"is_corresponding":false,"raw_author_name":"Shahreen Kasim","raw_affiliation_strings":["Department of Web Technology, Faculty of Computer Science and Information Technology, Universiti Tun Hussein Onn Malaysia, 86400, Parit Raja, Batu Pahat, Malaysia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Web Technology, Faculty of Computer Science and Information Technology, Universiti Tun Hussein Onn Malaysia, 86400, Parit Raja, Batu Pahat, Malaysia","institution_ids":["https://openalex.org/I930072361"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5054737927","display_name":"Rathiah Hashim","orcid":"https://orcid.org/0000-0003-4661-0819"},"institutions":[{"id":"https://openalex.org/I930072361","display_name":"Tun Hussein Onn University of Malaysia","ror":"https://ror.org/01c5wha71","country_code":"MY","type":"education","lineage":["https://openalex.org/I930072361"]}],"countries":["MY"],"is_corresponding":false,"raw_author_name":"Rathiah Hashim","raw_affiliation_strings":["Department of Web Technology, Faculty of Computer Science and Information Technology, Universiti Tun Hussein Onn Malaysia, 86400, Parit Raja, Batu Pahat, Malaysia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Web Technology, Faculty of Computer Science and Information Technology, Universiti Tun Hussein Onn Malaysia, 86400, Parit Raja, Batu Pahat, Malaysia","institution_ids":["https://openalex.org/I930072361"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":4,"citation_normalized_percentile":{"value":0.2320323,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":97,"max":98},"biblio":{"volume":null,"issue":null,"first_page":"471","last_page":"497"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9962000250816345,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9962000250816345,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9952999949455261,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13937","display_name":"Genetics, Bioinformatics, and Biomedical Research","score":0.9933000206947327,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/support-vector-machine","display_name":"Support vector machine","score":0.6916189789772034},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6407056450843811},{"id":"https://openalex.org/keywords/multiple-sequence-alignment","display_name":"Multiple sequence alignment","score":0.6317325234413147},{"id":"https://openalex.org/keywords/discriminative-model","display_name":"Discriminative model","score":0.6265567541122437},{"id":"https://openalex.org/keywords/classifier","display_name":"Classifier (UML)","score":0.5876768827438354},{"id":"https://openalex.org/keywords/sequence-alignment","display_name":"Sequence alignment","score":0.542292594909668},{"id":"https://openalex.org/keywords/smith\u2013waterman-algorithm","display_name":"Smith\u2013Waterman algorithm","score":0.5379316210746765},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.5017111301422119},{"id":"https://openalex.org/keywords/structural-alignment","display_name":"Structural alignment","score":0.4683104455471039},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.4461207091808319},{"id":"https://openalex.org/keywords/homology","display_name":"Homology (biology)","score":0.444049596786499},{"id":"https://openalex.org/keywords/precision-and-recall","display_name":"Precision and recall","score":0.42028889060020447},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.42015182971954346},{"id":"https://openalex.org/keywords/protein-sequencing","display_name":"Protein sequencing","score":0.41800862550735474},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.37053120136260986},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.3351115584373474},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.1478455662727356},{"id":"https://openalex.org/keywords/peptide-sequence","display_name":"Peptide sequence","score":0.13912028074264526},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.09365150332450867},{"id":"https://openalex.org/keywords/amino-acid","display_name":"Amino acid","score":0.08150053024291992}],"concepts":[{"id":"https://openalex.org/C12267149","wikidata":"https://www.wikidata.org/wiki/Q282453","display_name":"Support vector machine","level":2,"score":0.6916189789772034},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6407056450843811},{"id":"https://openalex.org/C88031987","wikidata":"https://www.wikidata.org/wiki/Q1377767","display_name":"Multiple sequence alignment","level":5,"score":0.6317325234413147},{"id":"https://openalex.org/C97931131","wikidata":"https://www.wikidata.org/wiki/Q5282087","display_name":"Discriminative model","level":2,"score":0.6265567541122437},{"id":"https://openalex.org/C95623464","wikidata":"https://www.wikidata.org/wiki/Q1096149","display_name":"Classifier (UML)","level":2,"score":0.5876768827438354},{"id":"https://openalex.org/C45484198","wikidata":"https://www.wikidata.org/wiki/Q827246","display_name":"Sequence alignment","level":4,"score":0.542292594909668},{"id":"https://openalex.org/C72802188","wikidata":"https://www.wikidata.org/wiki/Q1683352","display_name":"Smith\u2013Waterman algorithm","level":5,"score":0.5379316210746765},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.5017111301422119},{"id":"https://openalex.org/C4668613","wikidata":"https://www.wikidata.org/wiki/Q4116110","display_name":"Structural alignment","level":5,"score":0.4683104455471039},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.4461207091808319},{"id":"https://openalex.org/C165525559","wikidata":"https://www.wikidata.org/wiki/Q224180","display_name":"Homology (biology)","level":3,"score":0.444049596786499},{"id":"https://openalex.org/C81669768","wikidata":"https://www.wikidata.org/wiki/Q2359161","display_name":"Precision and recall","level":2,"score":0.42028889060020447},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.42015182971954346},{"id":"https://openalex.org/C10010492","wikidata":"https://www.wikidata.org/wiki/Q3142557","display_name":"Protein sequencing","level":4,"score":0.41800862550735474},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.37053120136260986},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.3351115584373474},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.1478455662727356},{"id":"https://openalex.org/C167625842","wikidata":"https://www.wikidata.org/wiki/Q899763","display_name":"Peptide sequence","level":3,"score":0.13912028074264526},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.09365150332450867},{"id":"https://openalex.org/C515207424","wikidata":"https://www.wikidata.org/wiki/Q8066","display_name":"Amino acid","level":2,"score":0.08150053024291992},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/978-3-642-20998-7_57","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-642-20998-7_57","pdf_url":null,"source":{"id":"https://openalex.org/S2764900261","display_name":"Communications in computer and information science","issn_l":"1865-0929","issn":["1865-0929","1865-0937"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Communications in Computer and Information Science","raw_type":"book-chapter"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":64,"referenced_works":["https://openalex.org/W1519266993","https://openalex.org/W1763445962","https://openalex.org/W1794209129","https://openalex.org/W1967538863","https://openalex.org/W1973714307","https://openalex.org/W1979147581","https://openalex.org/W1980600083","https://openalex.org/W1983218191","https://openalex.org/W1984794455","https://openalex.org/W2004228538","https://openalex.org/W2004667106","https://openalex.org/W2009351761","https://openalex.org/W2031901496","https://openalex.org/W2033339460","https://openalex.org/W2035333716","https://openalex.org/W2060035159","https://openalex.org/W2066689794","https://openalex.org/W2072248589","https://openalex.org/W2079470039","https://openalex.org/W2082628285","https://openalex.org/W2084787613","https://openalex.org/W2085972085","https://openalex.org/W2092003722","https://openalex.org/W2095824228","https://openalex.org/W2097767833","https://openalex.org/W2102502076","https://openalex.org/W2105749338","https://openalex.org/W2106868489","https://openalex.org/W2107415275","https://openalex.org/W2107511706","https://openalex.org/W2108787198","https://openalex.org/W2109831613","https://openalex.org/W2125725297","https://openalex.org/W2127122014","https://openalex.org/W2127774996","https://openalex.org/W2130479394","https://openalex.org/W2130625618","https://openalex.org/W2134646385","https://openalex.org/W2134941776","https://openalex.org/W2137015675","https://openalex.org/W2140244239","https://openalex.org/W2140872496","https://openalex.org/W2141885858","https://openalex.org/W2142013909","https://openalex.org/W2143210482","https://openalex.org/W2143357251","https://openalex.org/W2144362290","https://openalex.org/W2148823738","https://openalex.org/W2149363804","https://openalex.org/W2151831732","https://openalex.org/W2152350018","https://openalex.org/W2164698543","https://openalex.org/W2164886928","https://openalex.org/W2166718648","https://openalex.org/W2168964504","https://openalex.org/W2169602699","https://openalex.org/W2170421047","https://openalex.org/W2170960297","https://openalex.org/W2171213294","https://openalex.org/W2283504545","https://openalex.org/W2613433911","https://openalex.org/W3150974748","https://openalex.org/W4210323379","https://openalex.org/W7071437906"],"related_works":["https://openalex.org/W2051969447","https://openalex.org/W2103737249","https://openalex.org/W2029514038","https://openalex.org/W2468116983","https://openalex.org/W2111937814","https://openalex.org/W2187357871","https://openalex.org/W2948014085","https://openalex.org/W2501018882","https://openalex.org/W1482324242","https://openalex.org/W3186624150"],"abstract_inverted_index":null,"counts_by_year":[{"year":2017,"cited_by_count":4}],"updated_date":"2026-08-04T08:18:43.703281","created_date":"2025-10-10T00:00:00"}
