{"id":"https://openalex.org/W1544207610","doi":"https://doi.org/10.1007/978-3-642-20036-6_8","title":"Understanding Gene Sequence Variation in the Context of Transcription Regulation in Yeast","display_name":"Understanding Gene Sequence Variation in the Context of Transcription Regulation in Yeast","publication_year":2011,"publication_date":"2011-01-01","ids":{"openalex":"https://openalex.org/W1544207610","doi":"https://doi.org/10.1007/978-3-642-20036-6_8","mag":"1544207610"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-642-20036-6_8","is_oa":true,"landing_page_url":"https://doi.org/10.1007/978-3-642-20036-6_8","pdf_url":"https://link.springer.com/content/pdf/10.1007%2F978-3-642-20036-6_8.pdf","source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://link.springer.com/content/pdf/10.1007%2F978-3-642-20036-6_8.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5016870908","display_name":"Irit Gat\u2010Viks","orcid":"https://orcid.org/0000-0002-5431-6444"},"institutions":[{"id":"https://openalex.org/I107606265","display_name":"Broad Institute","ror":"https://ror.org/05a0ya142","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I107606265"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Irit Gat-Viks","raw_affiliation_strings":["Broad Institute of MIT and Harvard, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Broad Institute of MIT and Harvard, USA","institution_ids":["https://openalex.org/I107606265"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5091636150","display_name":"Renana Meller","orcid":null},"institutions":[{"id":"https://openalex.org/I16391192","display_name":"Tel Aviv University","ror":"https://ror.org/04mhzgx49","country_code":"IL","type":"education","lineage":["https://openalex.org/I16391192"]}],"countries":["IL"],"is_corresponding":false,"raw_author_name":"Renana Meller","raw_affiliation_strings":["Tel-Aviv University, Israel"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Tel-Aviv University, Israel","institution_ids":["https://openalex.org/I16391192"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5032235572","display_name":"Martin Kupiec","orcid":"https://orcid.org/0000-0002-7934-3342"},"institutions":[{"id":"https://openalex.org/I16391192","display_name":"Tel Aviv University","ror":"https://ror.org/04mhzgx49","country_code":"IL","type":"education","lineage":["https://openalex.org/I16391192"]}],"countries":["IL"],"is_corresponding":false,"raw_author_name":"Martin Kupiec","raw_affiliation_strings":["Tel-Aviv University, Israel"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Tel-Aviv University, Israel","institution_ids":["https://openalex.org/I16391192"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5038806020","display_name":"Ron Shamir","orcid":"https://orcid.org/0000-0003-1889-9870"},"institutions":[{"id":"https://openalex.org/I16391192","display_name":"Tel Aviv University","ror":"https://ror.org/04mhzgx49","country_code":"IL","type":"education","lineage":["https://openalex.org/I16391192"]}],"countries":["IL"],"is_corresponding":false,"raw_author_name":"Ron Shamir","raw_affiliation_strings":["Tel-Aviv University, Israel"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Tel-Aviv University, Israel","institution_ids":["https://openalex.org/I16391192"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":4,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.1019721,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"69","last_page":"69"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11468","display_name":"Genetic Mapping and Diversity in Plants and Animals","score":0.9986000061035156,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11468","display_name":"Genetic Mapping and Diversity in Plants and Animals","score":0.9986000061035156,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.996999979019165,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10497","display_name":"Fungal and yeast genetics research","score":0.9907000064849854,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/expression-quantitative-trait-loci","display_name":"Expression quantitative trait loci","score":0.9488720297813416},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5799769163131714},{"id":"https://openalex.org/keywords/trait","display_name":"Trait","score":0.5438133478164673},{"id":"https://openalex.org/keywords/gene-regulatory-network","display_name":"Gene regulatory network","score":0.525402843952179},{"id":"https://openalex.org/keywords/quantitative-trait-locus","display_name":"Quantitative trait locus","score":0.5111964344978333},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.4807541072368622},{"id":"https://openalex.org/keywords/genetic-variation","display_name":"Genetic variation","score":0.4722306728363037},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.4711291491985321},{"id":"https://openalex.org/keywords/context","display_name":"Context (archaeology)","score":0.4701782763004303},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.40364354848861694},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.3994736969470978},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.23313689231872559},{"id":"https://openalex.org/keywords/genotype","display_name":"Genotype","score":0.07295441627502441},{"id":"https://openalex.org/keywords/single-nucleotide-polymorphism","display_name":"Single-nucleotide polymorphism","score":0.06380680203437805}],"concepts":[{"id":"https://openalex.org/C168393362","wikidata":"https://www.wikidata.org/wiki/Q5421706","display_name":"Expression quantitative trait loci","level":5,"score":0.9488720297813416},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5799769163131714},{"id":"https://openalex.org/C106934330","wikidata":"https://www.wikidata.org/wiki/Q1971873","display_name":"Trait","level":2,"score":0.5438133478164673},{"id":"https://openalex.org/C67339327","wikidata":"https://www.wikidata.org/wiki/Q1502576","display_name":"Gene regulatory network","level":4,"score":0.525402843952179},{"id":"https://openalex.org/C81941488","wikidata":"https://www.wikidata.org/wiki/Q853421","display_name":"Quantitative trait locus","level":3,"score":0.5111964344978333},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.4807541072368622},{"id":"https://openalex.org/C68873052","wikidata":"https://www.wikidata.org/wiki/Q349856","display_name":"Genetic variation","level":3,"score":0.4722306728363037},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.4711291491985321},{"id":"https://openalex.org/C2779343474","wikidata":"https://www.wikidata.org/wiki/Q3109175","display_name":"Context (archaeology)","level":2,"score":0.4701782763004303},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.40364354848861694},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3994736969470978},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.23313689231872559},{"id":"https://openalex.org/C135763542","wikidata":"https://www.wikidata.org/wiki/Q106016","display_name":"Genotype","level":3,"score":0.07295441627502441},{"id":"https://openalex.org/C153209595","wikidata":"https://www.wikidata.org/wiki/Q501128","display_name":"Single-nucleotide polymorphism","level":4,"score":0.06380680203437805},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1007/978-3-642-20036-6_8","is_oa":true,"landing_page_url":"https://doi.org/10.1007/978-3-642-20036-6_8","pdf_url":"https://link.springer.com/content/pdf/10.1007%2F978-3-642-20036-6_8.pdf","source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.324.2145","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.324.2145","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://acgt.cs.tau.ac.il/papers/journal.pgen.pdf","raw_type":"text"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.771.1827","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.771.1827","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"ftp://ftp.ncbi.nlm.nih.gov/pub/pmc/87/49/pgen.1000800.PMC2794365.pdf","raw_type":"text"}],"best_oa_location":{"id":"doi:10.1007/978-3-642-20036-6_8","is_oa":true,"landing_page_url":"https://doi.org/10.1007/978-3-642-20036-6_8","pdf_url":"https://link.springer.com/content/pdf/10.1007%2F978-3-642-20036-6_8.pdf","source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"sustainable_development_goals":[{"display_name":"Zero hunger","id":"https://metadata.un.org/sdg/2","score":0.47999998927116394}],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W1544207610.pdf","grobid_xml":"https://content.openalex.org/works/W1544207610.grobid-xml"},"referenced_works_count":29,"referenced_works":["https://openalex.org/W1517816201","https://openalex.org/W1853389192","https://openalex.org/W1972666591","https://openalex.org/W1982168843","https://openalex.org/W1993751571","https://openalex.org/W1995830102","https://openalex.org/W2008404592","https://openalex.org/W2014347464","https://openalex.org/W2038225430","https://openalex.org/W2054624670","https://openalex.org/W2058682865","https://openalex.org/W2067245109","https://openalex.org/W2077941487","https://openalex.org/W2085458327","https://openalex.org/W2091576663","https://openalex.org/W2094248448","https://openalex.org/W2108334325","https://openalex.org/W2117007075","https://openalex.org/W2121368256","https://openalex.org/W2140863273","https://openalex.org/W2150182123","https://openalex.org/W2152227081","https://openalex.org/W2157167252","https://openalex.org/W2158128075","https://openalex.org/W2161079965","https://openalex.org/W2165054897","https://openalex.org/W2166606182","https://openalex.org/W2167120442","https://openalex.org/W2187952074"],"related_works":["https://openalex.org/W2164780420","https://openalex.org/W2995716764","https://openalex.org/W2995369528","https://openalex.org/W2161056048","https://openalex.org/W2587589680","https://openalex.org/W2901416251","https://openalex.org/W2896599515","https://openalex.org/W4252128938","https://openalex.org/W3012307849","https://openalex.org/W2020355323"],"abstract_inverted_index":null,"counts_by_year":[],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2025-10-10T00:00:00"}