{"id":"https://openalex.org/W27773507","doi":"https://doi.org/10.1007/978-3-642-16345-6_6","title":"STORMSeq: A Method for Ranking Regulatory Sequences by Integrating Experimental Datasets with Diverse Computational Predictions","display_name":"STORMSeq: A Method for Ranking Regulatory Sequences by Integrating Experimental Datasets with Diverse Computational Predictions","publication_year":2011,"publication_date":"2011-01-01","ids":{"openalex":"https://openalex.org/W27773507","doi":"https://doi.org/10.1007/978-3-642-16345-6_6","mag":"27773507"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-642-16345-6_6","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-642-16345-6_6","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Handbook of Statistical Bioinformatics","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5103567749","display_name":"Jim Huang","orcid":null},"institutions":[{"id":"https://openalex.org/I1290206253","display_name":"Microsoft (United States)","ror":"https://ror.org/00d0nc645","country_code":"US","type":"company","lineage":["https://openalex.org/I1290206253"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jim C. Huang","raw_affiliation_strings":["Microsoft Research, One Microsoft Way, Redmond, WA, 98052, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Microsoft Research, One Microsoft Way, Redmond, WA, 98052, USA","institution_ids":["https://openalex.org/I1290206253"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5003361977","display_name":"Brendan J. Frey","orcid":null},"institutions":[{"id":"https://openalex.org/I185261750","display_name":"University of Toronto","ror":"https://ror.org/03dbr7087","country_code":"CA","type":"education","lineage":["https://openalex.org/I185261750"]}],"countries":["CA"],"is_corresponding":true,"raw_author_name":"Brendan J. Frey","raw_affiliation_strings":["Probabilistic and Statistical Inference Group, University of Toronto, 10 King\u2019s College Road, Toronto, ON, M5S 3G4, Canada","Probabilistic and Statistical Inference Group, University of Toronto, 10 King's College Road, Toronto, ON, M5S 3G4, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Probabilistic and Statistical Inference Group, University of Toronto, 10 King\u2019s College Road, Toronto, ON, M5S 3G4, Canada","institution_ids":["https://openalex.org/I185261750"]},{"raw_affiliation_string":"Probabilistic and Statistical Inference Group, University of Toronto, 10 King's College Road, Toronto, ON, M5S 3G4, Canada","institution_ids":["https://openalex.org/I185261750"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5003361977"],"corresponding_institution_ids":["https://openalex.org/I185261750"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.00295421,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"109","last_page":"134"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10062","display_name":"MicroRNA in disease regulation","score":0.9987000226974487,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10062","display_name":"MicroRNA in disease regulation","score":0.9987000226974487,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10222","display_name":"Genomics and Chromatin Dynamics","score":0.9973999857902527,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10515","display_name":"Cancer-related molecular mechanisms research","score":0.9940999746322632,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/ranking","display_name":"Ranking (information retrieval)","score":0.7071620225906372},{"id":"https://openalex.org/keywords/inference","display_name":"Inference","score":0.6830294132232666},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6567904949188232},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.599353015422821},{"id":"https://openalex.org/keywords/rank","display_name":"Rank (graph theory)","score":0.5959573984146118},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.581230640411377},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.5710131525993347},{"id":"https://openalex.org/keywords/probabilistic-logic","display_name":"Probabilistic logic","score":0.5187916159629822},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.4346857964992523},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.38905972242355347},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.18873468041419983},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.17232385277748108},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.09352746605873108}],"concepts":[{"id":"https://openalex.org/C189430467","wikidata":"https://www.wikidata.org/wiki/Q7293293","display_name":"Ranking (information retrieval)","level":2,"score":0.7071620225906372},{"id":"https://openalex.org/C2776214188","wikidata":"https://www.wikidata.org/wiki/Q408386","display_name":"Inference","level":2,"score":0.6830294132232666},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6567904949188232},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.599353015422821},{"id":"https://openalex.org/C164226766","wikidata":"https://www.wikidata.org/wiki/Q7293202","display_name":"Rank (graph theory)","level":2,"score":0.5959573984146118},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.581230640411377},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.5710131525993347},{"id":"https://openalex.org/C49937458","wikidata":"https://www.wikidata.org/wiki/Q2599292","display_name":"Probabilistic logic","level":2,"score":0.5187916159629822},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.4346857964992523},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.38905972242355347},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.18873468041419983},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.17232385277748108},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.09352746605873108},{"id":"https://openalex.org/C114614502","wikidata":"https://www.wikidata.org/wiki/Q76592","display_name":"Combinatorics","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/978-3-642-16345-6_6","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-642-16345-6_6","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Handbook of Statistical Bioinformatics","raw_type":"book-chapter"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":22,"referenced_works":["https://openalex.org/W239085045","https://openalex.org/W1565450813","https://openalex.org/W1967395341","https://openalex.org/W1980253661","https://openalex.org/W1994122295","https://openalex.org/W2013449615","https://openalex.org/W2045234988","https://openalex.org/W2050869737","https://openalex.org/W2059073003","https://openalex.org/W2069870183","https://openalex.org/W2096373458","https://openalex.org/W2099994538","https://openalex.org/W2113390076","https://openalex.org/W2121356022","https://openalex.org/W2125810118","https://openalex.org/W2145091349","https://openalex.org/W2147946837","https://openalex.org/W2149785901","https://openalex.org/W2159793493","https://openalex.org/W2168157737","https://openalex.org/W2169600668","https://openalex.org/W2606211438"],"related_works":["https://openalex.org/W2188500270","https://openalex.org/W2303858293","https://openalex.org/W2152992791","https://openalex.org/W2798198862","https://openalex.org/W2915512527","https://openalex.org/W2055243143","https://openalex.org/W51364034","https://openalex.org/W2798997222","https://openalex.org/W3160516639","https://openalex.org/W2163814182"],"abstract_inverted_index":null,"counts_by_year":[],"updated_date":"2026-08-04T08:18:43.703281","created_date":"2025-10-10T00:00:00"}
