{"id":"https://openalex.org/W1604948685","doi":"https://doi.org/10.1007/978-3-642-15615-1_43","title":"Multiple Sequence Alignment by Improved Hidden Markov Model Training and Quantum-Behaved Particle Swarm Optimization","display_name":"Multiple Sequence Alignment by Improved Hidden Markov Model Training and Quantum-Behaved Particle Swarm Optimization","publication_year":2010,"publication_date":"2010-01-01","ids":{"openalex":"https://openalex.org/W1604948685","doi":"https://doi.org/10.1007/978-3-642-15615-1_43","mag":"1604948685"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-642-15615-1_43","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-642-15615-1_43","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5101417093","display_name":"Chengyuan Li","orcid":"https://orcid.org/0000-0002-4422-6584"},"institutions":[{"id":"https://openalex.org/I111599522","display_name":"Jiangnan University","ror":"https://ror.org/04mkzax54","country_code":"CN","type":"education","lineage":["https://openalex.org/I111599522"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Chengyuan Li","raw_affiliation_strings":["School of IOT Engineeing, Jiangnan University, Lihu Road 1800, 214122, WuXi, JiangSu, China"],"affiliations":[{"raw_affiliation_string":"School of IOT Engineeing, Jiangnan University, Lihu Road 1800, 214122, WuXi, JiangSu, China","institution_ids":["https://openalex.org/I111599522"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5013151803","display_name":"Haixia Long","orcid":"https://orcid.org/0000-0003-2202-3820"},"institutions":[{"id":"https://openalex.org/I111599522","display_name":"Jiangnan University","ror":"https://ror.org/04mkzax54","country_code":"CN","type":"education","lineage":["https://openalex.org/I111599522"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Haixia Long","raw_affiliation_strings":["School of Education, Jiangnan University, Lihu Road 1800, 214122, WuXi, JiangSu, China"],"affiliations":[{"raw_affiliation_string":"School of Education, Jiangnan University, Lihu Road 1800, 214122, WuXi, JiangSu, China","institution_ids":["https://openalex.org/I111599522"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5013365142","display_name":"Yanrui Ding","orcid":null},"institutions":[{"id":"https://openalex.org/I111599522","display_name":"Jiangnan University","ror":"https://ror.org/04mkzax54","country_code":"CN","type":"education","lineage":["https://openalex.org/I111599522"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yanrui Ding","raw_affiliation_strings":["School of IOT Engineeing, Jiangnan University, Lihu Road 1800, 214122, WuXi, JiangSu, China"],"affiliations":[{"raw_affiliation_string":"School of IOT Engineeing, Jiangnan University, Lihu Road 1800, 214122, WuXi, JiangSu, China","institution_ids":["https://openalex.org/I111599522"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100327203","display_name":"Jun Sun","orcid":"https://orcid.org/0000-0002-9824-4294"},"institutions":[{"id":"https://openalex.org/I111599522","display_name":"Jiangnan University","ror":"https://ror.org/04mkzax54","country_code":"CN","type":"education","lineage":["https://openalex.org/I111599522"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jun Sun","raw_affiliation_strings":["School of IOT Engineeing, Jiangnan University, Lihu Road 1800, 214122, WuXi, JiangSu, China"],"affiliations":[{"raw_affiliation_string":"School of IOT Engineeing, Jiangnan University, Lihu Road 1800, 214122, WuXi, JiangSu, China","institution_ids":["https://openalex.org/I111599522"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100720688","display_name":"Wenbo Xu","orcid":"https://orcid.org/0009-0009-9906-1391"},"institutions":[{"id":"https://openalex.org/I111599522","display_name":"Jiangnan University","ror":"https://ror.org/04mkzax54","country_code":"CN","type":"education","lineage":["https://openalex.org/I111599522"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Wenbo Xu","raw_affiliation_strings":["School of IOT Engineeing, Jiangnan University, Lihu Road 1800, 214122, WuXi, JiangSu, China"],"affiliations":[{"raw_affiliation_string":"School of IOT Engineeing, Jiangnan University, Lihu Road 1800, 214122, WuXi, JiangSu, China","institution_ids":["https://openalex.org/I111599522"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5101417093"],"corresponding_institution_ids":["https://openalex.org/I111599522"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":0.9623,"has_fulltext":false,"cited_by_count":9,"citation_normalized_percentile":{"value":0.78447829,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":null,"issue":null,"first_page":"358","last_page":"366"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9968000054359436,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/hidden-markov-model","display_name":"Hidden Markov model","score":0.9325711727142334},{"id":"https://openalex.org/keywords/particle-swarm-optimization","display_name":"Particle swarm optimization","score":0.7757163047790527},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.6976883411407471},{"id":"https://openalex.org/keywords/multiple-sequence-alignment","display_name":"Multiple sequence alignment","score":0.5838488340377808},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5487490892410278},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.5355833172798157},{"id":"https://openalex.org/keywords/swarm-behaviour","display_name":"Swarm behaviour","score":0.4976978600025177},{"id":"https://openalex.org/keywords/markov-chain","display_name":"Markov chain","score":0.4315292239189148},{"id":"https://openalex.org/keywords/quantum","display_name":"Quantum","score":0.4284713864326477},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.38713762164115906},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.3548480272293091},{"id":"https://openalex.org/keywords/sequence-alignment","display_name":"Sequence alignment","score":0.28513047099113464},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.24553963541984558},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.09480693936347961},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.08498933911323547},{"id":"https://openalex.org/keywords/physics","display_name":"Physics","score":0.07549405097961426},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.05463537573814392}],"concepts":[{"id":"https://openalex.org/C23224414","wikidata":"https://www.wikidata.org/wiki/Q176769","display_name":"Hidden Markov model","level":2,"score":0.9325711727142334},{"id":"https://openalex.org/C85617194","wikidata":"https://www.wikidata.org/wiki/Q2072794","display_name":"Particle swarm optimization","level":2,"score":0.7757163047790527},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.6976883411407471},{"id":"https://openalex.org/C88031987","wikidata":"https://www.wikidata.org/wiki/Q1377767","display_name":"Multiple sequence alignment","level":5,"score":0.5838488340377808},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5487490892410278},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.5355833172798157},{"id":"https://openalex.org/C181335050","wikidata":"https://www.wikidata.org/wiki/Q14915018","display_name":"Swarm behaviour","level":2,"score":0.4976978600025177},{"id":"https://openalex.org/C98763669","wikidata":"https://www.wikidata.org/wiki/Q176645","display_name":"Markov chain","level":2,"score":0.4315292239189148},{"id":"https://openalex.org/C84114770","wikidata":"https://www.wikidata.org/wiki/Q46344","display_name":"Quantum","level":2,"score":0.4284713864326477},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.38713762164115906},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.3548480272293091},{"id":"https://openalex.org/C45484198","wikidata":"https://www.wikidata.org/wiki/Q827246","display_name":"Sequence alignment","level":4,"score":0.28513047099113464},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.24553963541984558},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.09480693936347961},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.08498933911323547},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.07549405097961426},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.05463537573814392},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0},{"id":"https://openalex.org/C167625842","wikidata":"https://www.wikidata.org/wiki/Q899763","display_name":"Peptide sequence","level":3,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/978-3-642-15615-1_43","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-642-15615-1_43","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":23,"referenced_works":["https://openalex.org/W1492996112","https://openalex.org/W1566399673","https://openalex.org/W1592614241","https://openalex.org/W1969153299","https://openalex.org/W1971912858","https://openalex.org/W1982693868","https://openalex.org/W1990588471","https://openalex.org/W2020150461","https://openalex.org/W2044164898","https://openalex.org/W2093534140","https://openalex.org/W2102122585","https://openalex.org/W2102626325","https://openalex.org/W2102785645","https://openalex.org/W2102941368","https://openalex.org/W2106882534","https://openalex.org/W2123859926","https://openalex.org/W2125838338","https://openalex.org/W2129437793","https://openalex.org/W2132775137","https://openalex.org/W2141920771","https://openalex.org/W2152195021","https://openalex.org/W2163860567","https://openalex.org/W2169245194"],"related_works":["https://openalex.org/W2736680465","https://openalex.org/W4288714711","https://openalex.org/W3200708550","https://openalex.org/W2771637876","https://openalex.org/W2364370872","https://openalex.org/W4240853094","https://openalex.org/W2097963413","https://openalex.org/W4294093918","https://openalex.org/W2810496283","https://openalex.org/W2378969149"],"abstract_inverted_index":null,"counts_by_year":[{"year":2025,"cited_by_count":2},{"year":2023,"cited_by_count":1},{"year":2019,"cited_by_count":1},{"year":2016,"cited_by_count":2},{"year":2015,"cited_by_count":1},{"year":2013,"cited_by_count":1},{"year":2012,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
