{"id":"https://openalex.org/W1917700990","doi":"https://doi.org/10.1007/978-3-642-15294-8_5","title":"Prediction of RNA Secondary Structure Including Kissing Hairpin Motifs","display_name":"Prediction of RNA Secondary Structure Including Kissing Hairpin Motifs","publication_year":2010,"publication_date":"2010-01-01","ids":{"openalex":"https://openalex.org/W1917700990","doi":"https://doi.org/10.1007/978-3-642-15294-8_5","mag":"1917700990"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-642-15294-8_5","is_oa":true,"landing_page_url":"https://doi.org/10.1007/978-3-642-15294-8_5","pdf_url":"https://link.springer.com/content/pdf/10.1007/978-3-642-15294-8_5.pdf","source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://link.springer.com/content/pdf/10.1007/978-3-642-15294-8_5.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5067946016","display_name":"Corinna Theis","orcid":null},"institutions":[{"id":"https://openalex.org/I20121455","display_name":"Bielefeld University","ror":"https://ror.org/02hpadn98","country_code":"DE","type":"education","lineage":["https://openalex.org/I20121455"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"Corinna Theis","raw_affiliation_strings":["Faculty of Technology, Bielefeld University, 33501, Bielefeld, Germany"],"affiliations":[{"raw_affiliation_string":"Faculty of Technology, Bielefeld University, 33501, Bielefeld, Germany","institution_ids":["https://openalex.org/I20121455"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5065650315","display_name":"Stefan Janssen","orcid":"https://orcid.org/0000-0003-0955-0589"},"institutions":[{"id":"https://openalex.org/I20121455","display_name":"Bielefeld University","ror":"https://ror.org/02hpadn98","country_code":"DE","type":"education","lineage":["https://openalex.org/I20121455"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Stefan Janssen","raw_affiliation_strings":["Faculty of Technology, Bielefeld University, 33501, Bielefeld, Germany"],"affiliations":[{"raw_affiliation_string":"Faculty of Technology, Bielefeld University, 33501, Bielefeld, Germany","institution_ids":["https://openalex.org/I20121455"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5086259996","display_name":"Robert Giegerich","orcid":null},"institutions":[{"id":"https://openalex.org/I20121455","display_name":"Bielefeld University","ror":"https://ror.org/02hpadn98","country_code":"DE","type":"education","lineage":["https://openalex.org/I20121455"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Robert Giegerich","raw_affiliation_strings":["Faculty of Technology, Bielefeld University, 33501, Bielefeld, Germany"],"affiliations":[{"raw_affiliation_string":"Faculty of Technology, Bielefeld University, 33501, Bielefeld, Germany","institution_ids":["https://openalex.org/I20121455"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5067946016"],"corresponding_institution_ids":["https://openalex.org/I20121455"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":3.3727,"has_fulltext":true,"cited_by_count":30,"citation_normalized_percentile":{"value":0.92566939,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":null,"issue":null,"first_page":"52","last_page":"64"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11482","display_name":"RNA modifications and cancer","score":0.9944999814033508,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10604","display_name":"RNA Research and Splicing","score":0.9936000108718872,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.657011866569519},{"id":"https://openalex.org/keywords/simple","display_name":"Simple (philosophy)","score":0.604488730430603},{"id":"https://openalex.org/keywords/heuristic","display_name":"Heuristic","score":0.5449307560920715},{"id":"https://openalex.org/keywords/overlay","display_name":"Overlay","score":0.5337356925010681},{"id":"https://openalex.org/keywords/folding","display_name":"Folding (DSP implementation)","score":0.5136613249778748},{"id":"https://openalex.org/keywords/construct","display_name":"Construct (python library)","score":0.4755658507347107},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.47078460454940796},{"id":"https://openalex.org/keywords/nucleic-acid-secondary-structure","display_name":"Nucleic acid secondary structure","score":0.46407583355903625},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.46122461557388306},{"id":"https://openalex.org/keywords/rna","display_name":"RNA","score":0.39180856943130493},{"id":"https://openalex.org/keywords/combinatorics","display_name":"Combinatorics","score":0.3835292458534241},{"id":"https://openalex.org/keywords/topology","display_name":"Topology (electrical circuits)","score":0.34619802236557007},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.28600504994392395},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.1628011167049408},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.08897778391838074},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.07842400670051575}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.657011866569519},{"id":"https://openalex.org/C2780586882","wikidata":"https://www.wikidata.org/wiki/Q7520643","display_name":"Simple (philosophy)","level":2,"score":0.604488730430603},{"id":"https://openalex.org/C173801870","wikidata":"https://www.wikidata.org/wiki/Q201413","display_name":"Heuristic","level":2,"score":0.5449307560920715},{"id":"https://openalex.org/C136085584","wikidata":"https://www.wikidata.org/wiki/Q910289","display_name":"Overlay","level":2,"score":0.5337356925010681},{"id":"https://openalex.org/C2776545253","wikidata":"https://www.wikidata.org/wiki/Q5464292","display_name":"Folding (DSP implementation)","level":2,"score":0.5136613249778748},{"id":"https://openalex.org/C2780801425","wikidata":"https://www.wikidata.org/wiki/Q5164392","display_name":"Construct (python library)","level":2,"score":0.4755658507347107},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.47078460454940796},{"id":"https://openalex.org/C85468374","wikidata":"https://www.wikidata.org/wiki/Q6589957","display_name":"Nucleic acid secondary structure","level":4,"score":0.46407583355903625},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.46122461557388306},{"id":"https://openalex.org/C67705224","wikidata":"https://www.wikidata.org/wiki/Q11053","display_name":"RNA","level":3,"score":0.39180856943130493},{"id":"https://openalex.org/C114614502","wikidata":"https://www.wikidata.org/wiki/Q76592","display_name":"Combinatorics","level":1,"score":0.3835292458534241},{"id":"https://openalex.org/C184720557","wikidata":"https://www.wikidata.org/wiki/Q7825049","display_name":"Topology (electrical circuits)","level":2,"score":0.34619802236557007},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.28600504994392395},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.1628011167049408},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.08897778391838074},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.07842400670051575},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C119599485","wikidata":"https://www.wikidata.org/wiki/Q43035","display_name":"Electrical engineering","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1007/978-3-642-15294-8_5","is_oa":true,"landing_page_url":"https://doi.org/10.1007/978-3-642-15294-8_5","pdf_url":"https://link.springer.com/content/pdf/10.1007/978-3-642-15294-8_5.pdf","source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},{"id":"pmh:oai:pub.librecat.org:1894008","is_oa":true,"landing_page_url":"https://pub.uni-bielefeld.de/record/1894008","pdf_url":null,"source":{"id":"https://openalex.org/S4306401671","display_name":"PUB \u2013 Publications at Bielefeld University (Bielefeld University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I20121455","host_organization_name":"Bielefeld University","host_organization_lineage":["https://openalex.org/I20121455"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Theis C, Janssen S, Giegerich R. Prediction of RNA Secondary Structure Including Kissing Hairpin Motifs. In: Moulton V, Singh M, eds. &lt;em&gt;Algorithms in Bioinformatics. 10th international workshop (WABI 2010), proceedings&lt;/em&gt;. Lecture Notes in Bioinformatics. Vol 6293. Berlin: Springer;  2010: 52-64.","raw_type":"info:eu-repo/semantics/conferenceObject"},{"id":"pmh:oai:pubmedcentral.nih.gov:7121939","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/7121939","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Algorithms in Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1007/978-3-642-15294-8_5","is_oa":true,"landing_page_url":"https://doi.org/10.1007/978-3-642-15294-8_5","pdf_url":"https://link.springer.com/content/pdf/10.1007/978-3-642-15294-8_5.pdf","source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W1917700990.pdf","grobid_xml":"https://content.openalex.org/works/W1917700990.grobid-xml"},"referenced_works_count":27,"referenced_works":["https://openalex.org/W1517658539","https://openalex.org/W1543796220","https://openalex.org/W1590146311","https://openalex.org/W1725615870","https://openalex.org/W1969671774","https://openalex.org/W1978202265","https://openalex.org/W1981576666","https://openalex.org/W1987010534","https://openalex.org/W2003956388","https://openalex.org/W2004945910","https://openalex.org/W2012302177","https://openalex.org/W2025763720","https://openalex.org/W2054697783","https://openalex.org/W2076756368","https://openalex.org/W2078705770","https://openalex.org/W2083479074","https://openalex.org/W2096669340","https://openalex.org/W2106293441","https://openalex.org/W2109297587","https://openalex.org/W2115275409","https://openalex.org/W2117431427","https://openalex.org/W2122658384","https://openalex.org/W2123241418","https://openalex.org/W2128160420","https://openalex.org/W2128705009","https://openalex.org/W2141607439","https://openalex.org/W2148599336"],"related_works":["https://openalex.org/W595346907","https://openalex.org/W2366107444","https://openalex.org/W153296825","https://openalex.org/W598989511","https://openalex.org/W2375779923","https://openalex.org/W2041986468","https://openalex.org/W1967800214","https://openalex.org/W2055675609","https://openalex.org/W4388145910","https://openalex.org/W4388001050"],"abstract_inverted_index":null,"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":2},{"year":2021,"cited_by_count":2},{"year":2019,"cited_by_count":3},{"year":2018,"cited_by_count":3},{"year":2016,"cited_by_count":2},{"year":2015,"cited_by_count":4},{"year":2014,"cited_by_count":3},{"year":2013,"cited_by_count":1},{"year":2012,"cited_by_count":2}],"updated_date":"2026-04-04T16:13:02.066488","created_date":"2025-10-10T00:00:00"}
